RNA–Protein interactions for RNA: ENST00000547417.1

CPNE8-205, Transcript of copine 8, humanhuman

TSL 2

Gene CPNE8, Length 376 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-205ENST00000547417 METRNQ9UJH8 293 aa7.05□□□□□ -1.28
CPNE8-205ENST00000547417 PCDH10Q9P2E7 1040 aa7.04□□□□□ -1.28
CPNE8-205ENST00000547417 ASTLQ6HA08 431 aaPredicted RBP7.03□□□□□ -1.28
CPNE8-205ENST00000547417 MS4A3Q96HJ5 214 aa7.03□□□□□ -1.28
CPNE8-205ENST00000547417 ATMINO43313 823 aaPredicted RBP7.02□□□□□ -1.29
CPNE8-205ENST00000547417 SLC39A7Q92504 469 aa7.02□□□□□ -1.29
CPNE8-205ENST00000547417 C7P10643 843 aa7.01□□□□□ -1.29
CPNE8-205ENST00000547417 LCE2DQ5TA82 110 aaPredicted RBP6.99□□□□□ -1.29
CPNE8-205ENST00000547417 MAMSTRQ6ZN01 415 aa6.99□□□□□ -1.29
CPNE8-205ENST00000547417 PLEKHG5O94827 1062 aa6.97□□□□□ -1.29
CPNE8-205ENST00000547417 FAM163AQ96GL9 167 aaPredicted RBP6.97□□□□□ -1.29
CPNE8-205ENST00000547417 MIER1Q8N108 512 aa6.96□□□□□ -1.3
CPNE8-205ENST00000547417 ATN1P54259 1190 aaPredicted RBP6.94□□□□□ -1.3
CPNE8-205ENST00000547417 TSPYL2Q9H2G4 693 aaPredicted RBP6.94□□□□□ -1.3
CPNE8-205ENST00000547417 SCUBE2Q9NQ36 999 aa6.94□□□□□ -1.3
CPNE8-205ENST00000547417 PLCD3Q8N3E9 789 aa6.91□□□□□ -1.3
CPNE8-205ENST00000547417 POTEFA5A3E0 1075 aa6.9□□□□□ -1.3
CPNE8-205ENST00000547417 FKBP8Q14318 412 aa6.9□□□□□ -1.3
CPNE8-205ENST00000547417 CCDC61Q9Y6R9 512 aa6.9□□□□□ -1.3
CPNE8-205ENST00000547417 KIF12Q96FN5 646 aa6.89□□□□□ -1.31
CPNE8-205ENST00000547417 BMP2KQ9NSY1 1161 aaPredicted RBP6.88□□□□□ -1.31
CPNE8-205ENST00000547417 TRPC6Q9Y210 931 aa6.88□□□□□ -1.31
CPNE8-205ENST00000547417 ZBTB47Q9UFB7 747 aaPredicted RBP6.87□□□□□ -1.31
CPNE8-205ENST00000547417 RASEFQ8IZ41 740 aa6.86□□□□□ -1.31
CPNE8-205ENST00000547417 MAP3K13O43283 966 aa6.83□□□□□ -1.32
CPNE8-205ENST00000547417 CDAN1Q8IWY9 1227 aa6.83□□□□□ -1.32
CPNE8-205ENST00000547417 COLQQ9Y215 455 aaPredicted RBP6.83□□□□□ -1.32
CPNE8-205ENST00000547417 TIE1P35590 1138 aa6.82□□□□□ -1.32
CPNE8-205ENST00000547417 SEC24BO95487 1268 aa6.81□□□□□ -1.32
CPNE8-205ENST00000547417 NUBP1P53384 320 aa6.81□□□□□ -1.32
CPNE8-205ENST00000547417 TTLL13PA6NNM8 815 aa6.8□□□□□ -1.32
CPNE8-205ENST00000547417 FBXO3Q9UK99 471 aa6.79□□□□□ -1.32
CPNE8-205ENST00000547417 SGIP1Q9BQI5 828 aa6.78□□□□□ -1.32
CPNE8-205ENST00000547417 FAM212AQ96EL1 285 aa6.77□□□□□ -1.33
CPNE8-205ENST00000547417 PCDHB13Q9Y5F0 798 aa6.76□□□□□ -1.33
CPNE8-205ENST00000547417 TRIM35Q9UPQ4 493 aa6.75□□□□□ -1.33
CPNE8-205ENST00000547417 ST18O60284 1047 aa6.74□□□□□ -1.33
CPNE8-205ENST00000547417 IER5LQ5T953 404 aa6.74□□□□□ -1.33
CPNE8-205ENST00000547417 SLAIN1Q8ND83 568 aa6.74□□□□□ -1.33
CPNE8-205ENST00000547417 DCAF8Q5TAQ9 597 aa6.72□□□□□ -1.33
CPNE8-205ENST00000547417 IFNL1Q8IU54 200 aa6.71□□□□□ -1.34
CPNE8-205ENST00000547417 MMRN1Q13201 1228 aa6.69□□□□□ -1.34
CPNE8-205ENST00000547417 KLHL34Q8N239 644 aa6.69□□□□□ -1.34
CPNE8-205ENST00000547417 VASPP50552 380 aaPredicted RBP6.68□□□□□ -1.34
CPNE8-205ENST00000547417 PYGBP11216 843 aa6.67□□□□□ -1.34
CPNE8-205ENST00000547417 PLCG2P16885 1265 aa6.67□□□□□ -1.34
CPNE8-205ENST00000547417 SPNS2Q8IVW8 549 aa6.67□□□□□ -1.34
CPNE8-205ENST00000547417 TMEM106CQ9BVX2 250 aa6.67□□□□□ -1.34
CPNE8-205ENST00000547417 GSE1Q14687 1217 aa6.65□□□□□ -1.34
CPNE8-205ENST00000547417 IRX5P78411 483 aaPredicted RBP6.64□□□□□ -1.35
CPNE8-205ENST00000547417 TMEM121BQ9BXQ6 578 aaPredicted RBP6.63□□□□□ -1.35
CPNE8-205ENST00000547417 MARVELD3Q96A59 401 aa6.62□□□□□ -1.35
CPNE8-205ENST00000547417 PCDHB8Q9UN66 801 aa6.62□□□□□ -1.35
CPNE8-205ENST00000547417 OCEL1Q9H607 264 aa6.6□□□□□ -1.35
CPNE8-205ENST00000547417 SNPHO15079 494 aa6.59□□□□□ -1.35
CPNE8-205ENST00000547417 ZNF467Q7Z7K2 595 aaPredicted RBP6.59□□□□□ -1.35
CPNE8-205ENST00000547417 CHRM1P11229 460 aaPredicted RBP6.58□□□□□ -1.36
CPNE8-205ENST00000547417 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.58□□□□□ -1.36
CPNE8-205ENST00000547417 SPOCK2Q92563 424 aa6.57□□□□□ -1.36
CPNE8-205ENST00000547417 IFNLR1Q8IU57 520 aaPredicted RBP6.56□□□□□ -1.36
CPNE8-205ENST00000547417 GOLGA2Q08379 1002 aa6.53□□□□□ -1.36
CPNE8-205ENST00000547417 CIZ1Q9ULV3 898 aaPredicted RBP6.53□□□□□ -1.36
CPNE8-205ENST00000547417 PSEN1P49768 467 aa6.52□□□□□ -1.37
CPNE8-205ENST00000547417 EMP3P54852 163 aa6.52□□□□□ -1.37
CPNE8-205ENST00000547417 MKRN3Q13064 507 aaKnown RBP6.52□□□□□ -1.37
CPNE8-205ENST00000547417 POTEB3A0JP26 581 aa6.51□□□□□ -1.37
CPNE8-205ENST00000547417 POTEBQ6S5H4 581 aa6.51□□□□□ -1.37
CPNE8-205ENST00000547417 PDAP1Q13442 181 aaKnown RBP6.5□□□□□ -1.37
CPNE8-205ENST00000547417 KRTAP3-3Q9BYR6 98 aa6.5□□□□□ -1.37
CPNE8-205ENST00000547417 KRTAP3-2Q9BYR7 98 aa6.5□□□□□ -1.37
CPNE8-205ENST00000547417 C3orf67Q6ZVT6 689 aa6.49□□□□□ -1.37
CPNE8-205ENST00000547417 PDCD7Q8N8D1 485 aaKnown RBP6.49□□□□□ -1.37
CPNE8-205ENST00000547417 HS3ST6Q96QI5 342 aa6.49□□□□□ -1.37
CPNE8-205ENST00000547417 FAM205CA6NFA0 338 aa6.48□□□□□ -1.37
CPNE8-205ENST00000547417 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.48□□□□□ -1.37
CPNE8-205ENST00000547417 L3MBTL3Q96JM7 780 aaPredicted RBP6.47□□□□□ -1.37
CPNE8-205ENST00000547417 TRIM41Q8WV44 630 aa6.45□□□□□ -1.38
CPNE8-205ENST00000547417 CABP2Q9NPB3 220 aa6.44□□□□□ -1.38
CPNE8-205ENST00000547417 ILDR1Q86SU0 546 aaPredicted RBP6.43□□□□□ -1.38
CPNE8-205ENST00000547417 DPY19L2Q6NUT2 758 aa6.4□□□□□ -1.38
CPNE8-205ENST00000547417 G3V3G9 751 aa6.39□□□□□ -1.39
CPNE8-205ENST00000547417 BOLA1Q9Y3E2 137 aa6.38□□□□□ -1.39
CPNE8-205ENST00000547417 HOXB3P14651 431 aaPredicted RBP6.37□□□□□ -1.39
CPNE8-205ENST00000547417 EFCAB3Q8N7B9 438 aa6.37□□□□□ -1.39
CPNE8-205ENST00000547417 RIOK3O14730 519 aaKnown RBP6.35□□□□□ -1.39
CPNE8-205ENST00000547417 HOXB1P14653 301 aaPredicted RBP6.35□□□□□ -1.39
CPNE8-205ENST00000547417 RNF166Q96A37 237 aaPredicted RBP6.35□□□□□ -1.39
CPNE8-205ENST00000547417 ERBB3P21860 1342 aa6.33□□□□□ -1.4
CPNE8-205ENST00000547417 VGFO15240 615 aaPredicted RBP6.33□□□□□ -1.4
CPNE8-205ENST00000547417 ZNF710Q8N1W2 664 aa6.33□□□□□ -1.4
CPNE8-205ENST00000547417 RNF25Q96BH1 459 aaPredicted RBP6.33□□□□□ -1.4
CPNE8-205ENST00000547417 SOX12O15370 315 aa6.32□□□□□ -1.4
CPNE8-205ENST00000547417 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP6.31□□□□□ -1.4
CPNE8-205ENST00000547417 ZFP91Q96JP5 570 aaPredicted RBP6.31□□□□□ -1.4
CPNE8-205ENST00000547417 DOK7Q18PE1 504 aa6.3□□□□□ -1.4
CPNE8-205ENST00000547417 MYT1LQ9UL68 1186 aa6.3□□□□□ -1.4
CPNE8-205ENST00000547417 VARS2Q5ST30 1063 aaKnown RBP6.29□□□□□ -1.4
CPNE8-205ENST00000547417 TAOK2Q9UL54 1235 aa6.29□□□□□ -1.4
CPNE8-205ENST00000547417 MICALL2Q8IY33 904 aa6.27□□□□□ -1.41
CPNE8-205ENST00000547417 PHF8Q9UPP1 1060 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms