RNA–Protein interactions for RNA: ENST00000546964.5

PFKM-206, Transcript of phosphofructokinase, muscle, humanhuman

TSL 1 (best)

Gene PFKM, Length 3,063 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFKM-206ENST00000546964 GTF2E1P29083 439 aaPredicted RBP15.31■□□□□ 0.04
PFKM-206ENST00000546964 RTL5Q5HYW3 569 aaPredicted RBP15.31■□□□□ 0.04
PFKM-206ENST00000546964 TRIM41Q8WV44 630 aa15.3■□□□□ 0.04
PFKM-206ENST00000546964 CCER1Q8TC90 406 aaPredicted RBP15.29■□□□□ 0.04
PFKM-206ENST00000546964 SECISBP2LQ93073 1101 aaKnown RBP15.29■□□□□ 0.04
PFKM-206ENST00000546964 TPRNQ4KMQ1 711 aa15.28■□□□□ 0.04
PFKM-206ENST00000546964 PRDM10Q9NQV6 1147 aa15.28■□□□□ 0.04
PFKM-206ENST00000546964 FANCIQ9NVI1 1328 aa15.26■□□□□ 0.03
PFKM-206ENST00000546964 PAK3O75914 559 aaPredicted RBP15.26■□□□□ 0.03
PFKM-206ENST00000546964 HSP90AA2PQ14568 343 aaPredicted RBP15.26■□□□□ 0.03
PFKM-206ENST00000546964 DCAF1Q9Y4B6 1507 aa15.26■□□□□ 0.03
PFKM-206ENST00000546964 CNPY4Q8N129 248 aa15.21■□□□□ 0.03
PFKM-206ENST00000546964 POLR3GLQ9BT43 218 aa15.2■□□□□ 0.02
PFKM-206ENST00000546964 AMER1Q5JTC6 1135 aaPredicted RBP15.19■□□□□ 0.02
PFKM-206ENST00000546964 STAC3Q96MF2 364 aa15.18■□□□□ 0.02
PFKM-206ENST00000546964 IPO4Q8TEX9 1081 aaKnown RBP15.17■□□□□ 0.02
PFKM-206ENST00000546964 ARID4BQ4LE39 1312 aaPredicted RBP15.17■□□□□ 0.02
PFKM-206ENST00000546964 KCNG1Q9UIX4 513 aa15.16■□□□□ 0.02
PFKM-206ENST00000546964 ZNF316A6NFI3 1004 aaPredicted RBP15.16■□□□□ 0.02
PFKM-206ENST00000546964 VGLL3A8MV65 326 aa15.16■□□□□ 0.02
PFKM-206ENST00000546964 ZNF326Q5BKZ1 582 aaKnown RBP15.16■□□□□ 0.02
PFKM-206ENST00000546964 CANXP27824 592 aaKnown RBP15.15■□□□□ 0.02
PFKM-206ENST00000546964 PPP6R1Q9UPN7 881 aa15.15■□□□□ 0.02
PFKM-206ENST00000546964 CNKSR2Q8WXI2 1034 aa15.14■□□□□ 0.01
PFKM-206ENST00000546964 SUPT5HO00267 1087 aaKnown RBP15.14■□□□□ 0.01
PFKM-206ENST00000546964 NOP58Q9Y2X3 529 aaKnown RBP15.12■□□□□ 0.01
PFKM-206ENST00000546964 PRDM4Q9UKN5 801 aa15.1■□□□□ 0.01
PFKM-206ENST00000546964 CDK11BP21127 795 aaKnown RBP15.1■□□□□ 0.01
PFKM-206ENST00000546964 CDK11AQ9UQ88 783 aaPredicted RBP15.1■□□□□ 0.01
PFKM-206ENST00000546964 CHIC1Q5VXU3 224 aa15.08■□□□□ 0
PFKM-206ENST00000546964 KCNA4P22459 653 aa15.07■□□□□ 0
PFKM-206ENST00000546964 WWC1Q8IX03 1113 aa15.07■□□□□ 0
PFKM-206ENST00000546964 ZNF830Q96NB3 372 aaPredicted RBP15.06■□□□□ 0
PFKM-206ENST00000546964 IGSF3O75054 1194 aa15.05■□□□□ -0
PFKM-206ENST00000546964 TMED8Q6PL24 325 aaPredicted RBP15.04■□□□□ -0
PFKM-206ENST00000546964 MAPK8IP2Q13387 824 aaPredicted RBP15.03■□□□□ -0
PFKM-206ENST00000546964 FTSJ3Q8IY81 847 aaKnown RBP15.03■□□□□ -0
PFKM-206ENST00000546964 NEFMP07197 916 aa15.03■□□□□ -0
PFKM-206ENST00000546964 CNGB1Q14028 1251 aaPredicted RBP15□□□□□ -0.01
PFKM-206ENST00000546964 RRP9O43818 475 aaKnown RBP14.98□□□□□ -0.01
PFKM-206ENST00000546964 HSP90AA1P07900 732 aaKnown RBP14.98□□□□□ -0.01
PFKM-206ENST00000546964 TEX2Q8IWB9 1127 aa14.96□□□□□ -0.01
PFKM-206ENST00000546964 UBTFP17480 764 aaKnown RBP14.96□□□□□ -0.02
PFKM-206ENST00000546964 ZHX1Q9UKY1 873 aaPredicted RBP14.95□□□□□ -0.02
PFKM-206ENST00000546964 BCCIPQ9P287 314 aaKnown RBP eCLIP14.93□□□□□ -0.02
PFKM-206ENST00000546964 LAS1LQ9Y4W2 734 aaKnown RBP14.91□□□□□ -0.02
PFKM-206ENST00000546964 E9PSI1 815 aa14.88□□□□□ -0.03
PFKM-206ENST00000546964 HSP90B1P14625 803 aaKnown RBP14.88□□□□□ -0.03
PFKM-206ENST00000546964 RNF216Q9NWF9 866 aaPredicted RBP14.88□□□□□ -0.03
PFKM-206ENST00000546964 PATL2C9JE40 543 aaKnown RBP14.87□□□□□ -0.03
PFKM-206ENST00000546964 FAM43BQ6ZT52 329 aaPredicted RBP14.87□□□□□ -0.03
PFKM-206ENST00000546964 NCLP19338 710 aaKnown RBP14.86□□□□□ -0.03
PFKM-206ENST00000546964 SOX12O15370 315 aa14.84□□□□□ -0.03
PFKM-206ENST00000546964 WASHC2CQ9Y4E1 1318 aa14.83□□□□□ -0.04
PFKM-206ENST00000546964 CHRM1P11229 460 aaPredicted RBP14.83□□□□□ -0.04
PFKM-206ENST00000546964 CERS3Q8IU89 383 aa14.82□□□□□ -0.04
PFKM-206ENST00000546964 KCNH8Q96L42 1107 aa14.82□□□□□ -0.04
PFKM-206ENST00000546964 FAM43AQ8N2R8 423 aa14.81□□□□□ -0.04
PFKM-206ENST00000546964 CALD1Q05682 793 aaKnown RBP14.81□□□□□ -0.04
PFKM-206ENST00000546964 WASHC2AQ641Q2 1341 aa14.81□□□□□ -0.04
PFKM-206ENST00000546964 RRAGDQ9NQL2 400 aaPredicted RBP14.79□□□□□ -0.04
PFKM-206ENST00000546964 P3H3Q8IVL6 736 aa14.79□□□□□ -0.04
PFKM-206ENST00000546964 TMEM51Q9NW97 253 aa14.79□□□□□ -0.04
PFKM-206ENST00000546964 ZNF592Q92610 1267 aa14.78□□□□□ -0.04
PFKM-206ENST00000546964 ARID3AQ99856 593 aa14.77□□□□□ -0.04
PFKM-206ENST00000546964 BAZ1BQ9UIG0 1483 aaKnown RBP14.77□□□□□ -0.05
PFKM-206ENST00000546964 CCDC9Q9Y3X0 531 aaKnown RBP14.77□□□□□ -0.05
PFKM-206ENST00000546964 MYCNP04198 464 aaPredicted RBP14.76□□□□□ -0.05
PFKM-206ENST00000546964 ZBTB47Q9UFB7 747 aaPredicted RBP14.76□□□□□ -0.05
PFKM-206ENST00000546964 ABCC9O60706 1549 aa14.74□□□□□ -0.05
PFKM-206ENST00000546964 DCAF11Q8TEB1 546 aa14.74□□□□□ -0.05
PFKM-206ENST00000546964 SLC52A1Q9NWF4 448 aa14.74□□□□□ -0.05
PFKM-206ENST00000546964 FBXO3Q9UK99 471 aa14.71□□□□□ -0.05
PFKM-206ENST00000546964 RGS22Q8NE09 1264 aa14.71□□□□□ -0.06
PFKM-206ENST00000546964 CHMP4CQ96CF2 233 aa14.71□□□□□ -0.06
PFKM-206ENST00000546964 FRAT1Q92837 279 aaPredicted RBP14.7□□□□□ -0.06
PFKM-206ENST00000546964 GSE1Q14687 1217 aa14.69□□□□□ -0.06
PFKM-206ENST00000546964 ZBTB22O15209 634 aa14.69□□□□□ -0.06
PFKM-206ENST00000546964 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.69□□□□□ -0.06
PFKM-206ENST00000546964 AEBP1Q8IUX7 1158 aa14.69□□□□□ -0.06
PFKM-206ENST00000546964 FAM193AP78312 1265 aa14.68□□□□□ -0.06
PFKM-206ENST00000546964 ZNF526Q8TF50 670 aaPredicted RBP14.67□□□□□ -0.06
PFKM-206ENST00000546964 PPM1GO15355 546 aaPredicted RBP14.67□□□□□ -0.06
PFKM-206ENST00000546964 DCAF8L2P0C7V8 631 aa14.66□□□□□ -0.06
PFKM-206ENST00000546964 ZBTB9Q96C00 473 aa14.64□□□□□ -0.07
PFKM-206ENST00000546964 PNNQ9H307 717 aaKnown RBP14.64□□□□□ -0.07
PFKM-206ENST00000546964 NGEFQ8N5V2 710 aa14.63□□□□□ -0.07
PFKM-206ENST00000546964 DDRGK1Q96HY6 314 aa14.63□□□□□ -0.07
PFKM-206ENST00000546964 IPO9Q96P70 1041 aaKnown RBP14.62□□□□□ -0.07
PFKM-206ENST00000546964 TMEM132AQ24JP5 1023 aa14.62□□□□□ -0.07
PFKM-206ENST00000546964 IRX3P78415 501 aaPredicted RBP14.61□□□□□ -0.07
PFKM-206ENST00000546964 ANP32BQ92688 251 aaKnown RBP14.61□□□□□ -0.07
PFKM-206ENST00000546964 HDAC5Q9UQL6 1122 aa14.61□□□□□ -0.07
PFKM-206ENST00000546964 APPP05067 770 aa14.61□□□□□ -0.07
PFKM-206ENST00000546964 ANP32AP39687 249 aaKnown RBP14.59□□□□□ -0.07
PFKM-206ENST00000546964 MPNDQ8N594 471 aa14.59□□□□□ -0.07
PFKM-206ENST00000546964 TICAM2Q86XR7 235 aa14.56□□□□□ -0.08
PFKM-206ENST00000546964 PDCL3Q9H2J4 239 aa14.56□□□□□ -0.08
PFKM-206ENST00000546964 TRIM52Q96A61 297 aa14.56□□□□□ -0.08
PFKM-206ENST00000546964 PPP4R3BQ5MIZ7 849 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms