RNA–Protein interactions for RNA: ENST00000546816.5

CCDC38-204, Transcript of coiled-coil domain containing 38, humanhuman

TSL 2

Gene CCDC38, Length 465 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-204ENST00000546816 RASEFQ8IZ41 740 aa15.59■□□□□ 0.09
CCDC38-204ENST00000546816 PELP1Q8IZL8 1130 aaKnown RBP15.56■□□□□ 0.08
CCDC38-204ENST00000546816 KIF12Q96FN5 646 aa15.56■□□□□ 0.08
CCDC38-204ENST00000546816 ASTLQ6HA08 431 aaPredicted RBP15.54■□□□□ 0.08
CCDC38-204ENST00000546816 ATMINO43313 823 aaPredicted RBP15.51■□□□□ 0.07
CCDC38-204ENST00000546816 ZBTB47Q9UFB7 747 aaPredicted RBP15.5■□□□□ 0.07
CCDC38-204ENST00000546816 NUBP1P53384 320 aa15.49■□□□□ 0.07
CCDC38-204ENST00000546816 POTEB2H3BUK9 544 aa15.47■□□□□ 0.07
CCDC38-204ENST00000546816 MAP3K13O43283 966 aa15.46■□□□□ 0.07
CCDC38-204ENST00000546816 TRPC6Q9Y210 931 aa15.41■□□□□ 0.06
CCDC38-204ENST00000546816 FBXO3Q9UK99 471 aa15.4■□□□□ 0.06
CCDC38-204ENST00000546816 ATN1P54259 1190 aaPredicted RBP15.39■□□□□ 0.05
CCDC38-204ENST00000546816 SLC39A7Q92504 469 aa15.39■□□□□ 0.05
CCDC38-204ENST00000546816 METRNQ9UJH8 293 aa15.39■□□□□ 0.05
CCDC38-204ENST00000546816 C7P10643 843 aa15.38■□□□□ 0.05
CCDC38-204ENST00000546816 OTUD5Q96G74 571 aa15.38■□□□□ 0.05
CCDC38-204ENST00000546816 BMP2KQ9NSY1 1161 aaPredicted RBP15.38■□□□□ 0.05
CCDC38-204ENST00000546816 TIE1P35590 1138 aa15.34■□□□□ 0.05
CCDC38-204ENST00000546816 SGIP1Q9BQI5 828 aa15.33■□□□□ 0.04
CCDC38-204ENST00000546816 FAM212AQ96EL1 285 aa15.32■□□□□ 0.04
CCDC38-204ENST00000546816 PCDHB13Q9Y5F0 798 aa15.28■□□□□ 0.04
CCDC38-204ENST00000546816 POTEJP0CG39 1038 aa15.27■□□□□ 0.04
CCDC38-204ENST00000546816 TTLL13PA6NNM8 815 aa15.26■□□□□ 0.03
CCDC38-204ENST00000546816 VASPP50552 380 aaPredicted RBP15.24■□□□□ 0.03
CCDC38-204ENST00000546816 POTEFA5A3E0 1075 aa15.23■□□□□ 0.03
CCDC38-204ENST00000546816 IFNL1Q8IU54 200 aa15.23■□□□□ 0.03
CCDC38-204ENST00000546816 DCAF8Q5TAQ9 597 aa15.19■□□□□ 0.02
CCDC38-204ENST00000546816 TRIM35Q9UPQ4 493 aa15.14■□□□□ 0.01
CCDC38-204ENST00000546816 PYGBP11216 843 aa15.13■□□□□ 0.01
CCDC38-204ENST00000546816 MAMSTRQ6ZN01 415 aa15.13■□□□□ 0.01
CCDC38-204ENST00000546816 KLHL34Q8N239 644 aa15.12■□□□□ 0.01
CCDC38-204ENST00000546816 COLQQ9Y215 455 aaPredicted RBP15.12■□□□□ 0.01
CCDC38-204ENST00000546816 IER5LQ5T953 404 aa15.1■□□□□ 0.01
CCDC38-204ENST00000546816 TMEM106CQ9BVX2 250 aa15.09■□□□□ 0.01
CCDC38-204ENST00000546816 SEC24BO95487 1268 aa15.05■□□□□ -0
CCDC38-204ENST00000546816 GSE1Q14687 1217 aa15.04■□□□□ -0
CCDC38-204ENST00000546816 SCUBE2Q9NQ36 999 aa15.04■□□□□ -0
CCDC38-204ENST00000546816 PCDHB8Q9UN66 801 aa15.02■□□□□ -0
CCDC38-204ENST00000546816 IFNLR1Q8IU57 520 aaPredicted RBP14.99□□□□□ -0.01
CCDC38-204ENST00000546816 CHRM1P11229 460 aaPredicted RBP14.96□□□□□ -0.01
CCDC38-204ENST00000546816 IRX5P78411 483 aaPredicted RBP14.95□□□□□ -0.02
CCDC38-204ENST00000546816 SPOCK2Q92563 424 aa14.92□□□□□ -0.02
CCDC38-204ENST00000546816 ZNF467Q7Z7K2 595 aaPredicted RBP14.91□□□□□ -0.02
CCDC38-204ENST00000546816 POTEMA6NI47 508 aa14.9□□□□□ -0.02
CCDC38-204ENST00000546816 PLCG2P16885 1265 aa14.89□□□□□ -0.03
CCDC38-204ENST00000546816 LCE2DQ5TA82 110 aaPredicted RBP14.88□□□□□ -0.03
CCDC38-204ENST00000546816 POTEGQ6S5H5 508 aa14.87□□□□□ -0.03
CCDC38-204ENST00000546816 OCEL1Q9H607 264 aa14.85□□□□□ -0.03
CCDC38-204ENST00000546816 FAM163AQ96GL9 167 aaPredicted RBP14.81□□□□□ -0.04
CCDC38-204ENST00000546816 CIZ1Q9ULV3 898 aaPredicted RBP14.8□□□□□ -0.04
CCDC38-204ENST00000546816 PSEN1P49768 467 aa14.79□□□□□ -0.04
CCDC38-204ENST00000546816 SLAIN1Q8ND83 568 aa14.75□□□□□ -0.05
CCDC38-204ENST00000546816 PDCD7Q8N8D1 485 aaKnown RBP14.73□□□□□ -0.05
CCDC38-204ENST00000546816 PDAP1Q13442 181 aaKnown RBP14.72□□□□□ -0.05
CCDC38-204ENST00000546816 MKRN3Q13064 507 aaKnown RBP14.71□□□□□ -0.05
CCDC38-204ENST00000546816 PLSCR2Q9NRY7 297 aa14.7□□□□□ -0.06
CCDC38-204ENST00000546816 GOLGA2Q08379 1002 aa14.69□□□□□ -0.06
CCDC38-204ENST00000546816 PCDH10Q9P2E7 1040 aa14.68□□□□□ -0.06
CCDC38-204ENST00000546816 ILDR1Q86SU0 546 aaPredicted RBP14.65□□□□□ -0.06
CCDC38-204ENST00000546816 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.64□□□□□ -0.07
CCDC38-204ENST00000546816 TRIM41Q8WV44 630 aa14.63□□□□□ -0.07
CCDC38-204ENST00000546816 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.62□□□□□ -0.07
CCDC38-204ENST00000546816 ST18O60284 1047 aa14.59□□□□□ -0.07
CCDC38-204ENST00000546816 L3MBTL3Q96JM7 780 aaPredicted RBP14.59□□□□□ -0.07
CCDC38-204ENST00000546816 CABP2Q9NPB3 220 aa14.59□□□□□ -0.07
CCDC38-204ENST00000546816 DPY19L2Q6NUT2 758 aa14.53□□□□□ -0.08
CCDC38-204ENST00000546816 C3orf67Q6ZVT6 689 aa14.52□□□□□ -0.09
CCDC38-204ENST00000546816 SNPHO15079 494 aa14.49□□□□□ -0.09
CCDC38-204ENST00000546816 RNF25Q96BH1 459 aaPredicted RBP14.48□□□□□ -0.09
CCDC38-204ENST00000546816 RIOK3O14730 519 aaKnown RBP14.44□□□□□ -0.1
CCDC38-204ENST00000546816 CDAN1Q8IWY9 1227 aa14.44□□□□□ -0.1
CCDC38-204ENST00000546816 EFCAB3Q8N7B9 438 aa14.44□□□□□ -0.1
CCDC38-204ENST00000546816 TMEM121BQ9BXQ6 578 aaPredicted RBP14.44□□□□□ -0.1
CCDC38-204ENST00000546816 BOLA1Q9Y3E2 137 aa14.43□□□□□ -0.1
CCDC38-204ENST00000546816 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.38□□□□□ -0.11
CCDC38-204ENST00000546816 VGFO15240 615 aaPredicted RBP14.38□□□□□ -0.11
CCDC38-204ENST00000546816 ZFP91Q96JP5 570 aaPredicted RBP14.38□□□□□ -0.11
CCDC38-204ENST00000546816 G3V3G9 751 aa14.35□□□□□ -0.11
CCDC38-204ENST00000546816 MARVELD3Q96A59 401 aa14.33□□□□□ -0.12
CCDC38-204ENST00000546816 SOX12O15370 315 aa14.31□□□□□ -0.12
CCDC38-204ENST00000546816 MS4A4AQ96JQ5 239 aa14.28□□□□□ -0.12
CCDC38-204ENST00000546816 HOXB3P14651 431 aaPredicted RBP14.26□□□□□ -0.13
CCDC38-204ENST00000546816 PHF8Q9UPP1 1060 aa14.25□□□□□ -0.13
CCDC38-204ENST00000546816 MICALL2Q8IY33 904 aa14.24□□□□□ -0.13
CCDC38-204ENST00000546816 EMP3P54852 163 aa14.22□□□□□ -0.13
CCDC38-204ENST00000546816 TMEM92Q6UXU6 159 aa14.2□□□□□ -0.14
CCDC38-204ENST00000546816 BCL11BQ9C0K0 894 aaPredicted RBP14.2□□□□□ -0.14
CCDC38-204ENST00000546816 TAOK2Q9UL54 1235 aa14.2□□□□□ -0.14
CCDC38-204ENST00000546816 POTEB3A0JP26 581 aa14.18□□□□□ -0.14
CCDC38-204ENST00000546816 ECM2O94769 699 aaPredicted RBP14.18□□□□□ -0.14
CCDC38-204ENST00000546816 POTEBQ6S5H4 581 aa14.18□□□□□ -0.14
CCDC38-204ENST00000546816 PKD2Q13563 968 aa14.17□□□□□ -0.14
CCDC38-204ENST00000546816 FBXO22Q8NEZ5 403 aa14.16□□□□□ -0.14
CCDC38-204ENST00000546816 NLRP6P59044 892 aa14.14□□□□□ -0.15
CCDC38-204ENST00000546816 HS3ST6Q96QI5 342 aa14.14□□□□□ -0.15
CCDC38-204ENST00000546816 STK24Q9Y6E0 443 aa14.14□□□□□ -0.15
CCDC38-204ENST00000546816 FAM205CA6NFA0 338 aa14.13□□□□□ -0.15
CCDC38-204ENST00000546816 DOK7Q18PE1 504 aa14.13□□□□□ -0.15
CCDC38-204ENST00000546816 HOXB1P14653 301 aaPredicted RBP14.12□□□□□ -0.15
CCDC38-204ENST00000546816 STK25O00506 426 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms