RNA–Protein interactions for RNA: ENST00000546248.5

TRDN-205, Transcript of triadin, humanhuman

TSL 1 (best) BASIC

Gene TRDN, Length 1,179 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRDN-205ENST00000546248 MS4A3Q96HJ5 214 aa13.8□□□□□ -0.2
TRDN-205ENST00000546248 PLSCR2Q9NRY7 297 aa13.74□□□□□ -0.21
TRDN-205ENST00000546248 KIF12Q96FN5 646 aa13.72□□□□□ -0.21
TRDN-205ENST00000546248 PELP1Q8IZL8 1130 aaKnown RBP13.71□□□□□ -0.21
TRDN-205ENST00000546248 NUBP1P53384 320 aa13.7□□□□□ -0.22
TRDN-205ENST00000546248 ZBTB47Q9UFB7 747 aaPredicted RBP13.69□□□□□ -0.22
TRDN-205ENST00000546248 ASTLQ6HA08 431 aaPredicted RBP13.66□□□□□ -0.22
TRDN-205ENST00000546248 FBXO3Q9UK99 471 aa13.66□□□□□ -0.22
TRDN-205ENST00000546248 MAP3K13O43283 966 aa13.65□□□□□ -0.22
TRDN-205ENST00000546248 ATMINO43313 823 aaPredicted RBP13.65□□□□□ -0.22
TRDN-205ENST00000546248 TRPC6Q9Y210 931 aa13.63□□□□□ -0.23
TRDN-205ENST00000546248 POTEB2H3BUK9 544 aa13.62□□□□□ -0.23
TRDN-205ENST00000546248 ATN1P54259 1190 aaPredicted RBP13.57□□□□□ -0.24
TRDN-205ENST00000546248 BMP2KQ9NSY1 1161 aaPredicted RBP13.56□□□□□ -0.24
TRDN-205ENST00000546248 VASPP50552 380 aaPredicted RBP13.55□□□□□ -0.24
TRDN-205ENST00000546248 FAM212AQ96EL1 285 aa13.55□□□□□ -0.24
TRDN-205ENST00000546248 METRNQ9UJH8 293 aa13.54□□□□□ -0.24
TRDN-205ENST00000546248 SLC39A7Q92504 469 aa13.52□□□□□ -0.25
TRDN-205ENST00000546248 PCDHB13Q9Y5F0 798 aa13.51□□□□□ -0.25
TRDN-205ENST00000546248 C7P10643 843 aa13.5□□□□□ -0.25
TRDN-205ENST00000546248 TIE1P35590 1138 aa13.5□□□□□ -0.25
TRDN-205ENST00000546248 OTUD5Q96G74 571 aa13.5□□□□□ -0.25
TRDN-205ENST00000546248 SGIP1Q9BQI5 828 aa13.49□□□□□ -0.25
TRDN-205ENST00000546248 DCAF8Q5TAQ9 597 aa13.46□□□□□ -0.25
TRDN-205ENST00000546248 IFNL1Q8IU54 200 aa13.46□□□□□ -0.25
TRDN-205ENST00000546248 TTLL13PA6NNM8 815 aa13.45□□□□□ -0.26
TRDN-205ENST00000546248 KLHL34Q8N239 644 aa13.45□□□□□ -0.26
TRDN-205ENST00000546248 POTEJP0CG39 1038 aa13.44□□□□□ -0.26
TRDN-205ENST00000546248 POTEFA5A3E0 1075 aa13.42□□□□□ -0.26
TRDN-205ENST00000546248 PYGBP11216 843 aa13.41□□□□□ -0.26
TRDN-205ENST00000546248 TRIM35Q9UPQ4 493 aa13.37□□□□□ -0.27
TRDN-205ENST00000546248 IFNLR1Q8IU57 520 aaPredicted RBP13.34□□□□□ -0.27
TRDN-205ENST00000546248 TMEM106CQ9BVX2 250 aa13.33□□□□□ -0.28
TRDN-205ENST00000546248 COLQQ9Y215 455 aaPredicted RBP13.33□□□□□ -0.28
TRDN-205ENST00000546248 PCDHB8Q9UN66 801 aa13.31□□□□□ -0.28
TRDN-205ENST00000546248 GSE1Q14687 1217 aa13.3□□□□□ -0.28
TRDN-205ENST00000546248 IER5LQ5T953 404 aa13.27□□□□□ -0.29
TRDN-205ENST00000546248 SEC24BO95487 1268 aa13.26□□□□□ -0.29
TRDN-205ENST00000546248 MAMSTRQ6ZN01 415 aa13.25□□□□□ -0.29
TRDN-205ENST00000546248 SPOCK2Q92563 424 aa13.25□□□□□ -0.29
TRDN-205ENST00000546248 SCUBE2Q9NQ36 999 aa13.21□□□□□ -0.29
TRDN-205ENST00000546248 CHRM1P11229 460 aaPredicted RBP13.2□□□□□ -0.3
TRDN-205ENST00000546248 IRX5P78411 483 aaPredicted RBP13.17□□□□□ -0.3
TRDN-205ENST00000546248 ZNF467Q7Z7K2 595 aaPredicted RBP13.17□□□□□ -0.3
TRDN-205ENST00000546248 CIZ1Q9ULV3 898 aaPredicted RBP13.16□□□□□ -0.3
TRDN-205ENST00000546248 PLCG2P16885 1265 aa13.14□□□□□ -0.31
TRDN-205ENST00000546248 POTEMA6NI47 508 aa13.1□□□□□ -0.31
TRDN-205ENST00000546248 LCE2DQ5TA82 110 aaPredicted RBP13.1□□□□□ -0.31
TRDN-205ENST00000546248 PSEN1P49768 467 aa13.08□□□□□ -0.32
TRDN-205ENST00000546248 OCEL1Q9H607 264 aa13.08□□□□□ -0.32
TRDN-205ENST00000546248 POTEGQ6S5H5 508 aa13.04□□□□□ -0.32
TRDN-205ENST00000546248 PDAP1Q13442 181 aaKnown RBP13.02□□□□□ -0.33
TRDN-205ENST00000546248 FAM163AQ96GL9 167 aaPredicted RBP13.02□□□□□ -0.33
TRDN-205ENST00000546248 GOLGA2Q08379 1002 aa13□□□□□ -0.33
TRDN-205ENST00000546248 MKRN3Q13064 507 aaKnown RBP13□□□□□ -0.33
TRDN-205ENST00000546248 PDCD7Q8N8D1 485 aaKnown RBP13□□□□□ -0.33
TRDN-205ENST00000546248 SLAIN1Q8ND83 568 aa12.99□□□□□ -0.33
TRDN-205ENST00000546248 TRIM41Q8WV44 630 aa12.94□□□□□ -0.34
TRDN-205ENST00000546248 CABP2Q9NPB3 220 aa12.94□□□□□ -0.34
TRDN-205ENST00000546248 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.94□□□□□ -0.34
TRDN-205ENST00000546248 ILDR1Q86SU0 546 aaPredicted RBP12.9□□□□□ -0.34
TRDN-205ENST00000546248 RNF25Q96BH1 459 aaPredicted RBP12.88□□□□□ -0.35
TRDN-205ENST00000546248 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.88□□□□□ -0.35
TRDN-205ENST00000546248 DPY19L2Q6NUT2 758 aa12.87□□□□□ -0.35
TRDN-205ENST00000546248 L3MBTL3Q96JM7 780 aaPredicted RBP12.84□□□□□ -0.35
TRDN-205ENST00000546248 ST18O60284 1047 aa12.82□□□□□ -0.36
TRDN-205ENST00000546248 RIOK3O14730 519 aaKnown RBP12.81□□□□□ -0.36
TRDN-205ENST00000546248 C3orf67Q6ZVT6 689 aa12.81□□□□□ -0.36
TRDN-205ENST00000546248 EFCAB3Q8N7B9 438 aa12.81□□□□□ -0.36
TRDN-205ENST00000546248 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.77□□□□□ -0.37
TRDN-205ENST00000546248 ZFP91Q96JP5 570 aaPredicted RBP12.77□□□□□ -0.37
TRDN-205ENST00000546248 PCDH10Q9P2E7 1040 aa12.77□□□□□ -0.37
TRDN-205ENST00000546248 VGFO15240 615 aaPredicted RBP12.74□□□□□ -0.37
TRDN-205ENST00000546248 BOLA1Q9Y3E2 137 aa12.74□□□□□ -0.37
TRDN-205ENST00000546248 SNPHO15079 494 aa12.71□□□□□ -0.37
TRDN-205ENST00000546248 G3V3G9 751 aa12.68□□□□□ -0.38
TRDN-205ENST00000546248 CDAN1Q8IWY9 1227 aa12.66□□□□□ -0.38
TRDN-205ENST00000546248 TMEM121BQ9BXQ6 578 aaPredicted RBP12.66□□□□□ -0.38
TRDN-205ENST00000546248 SOX12O15370 315 aa12.65□□□□□ -0.38
TRDN-205ENST00000546248 ECM2O94769 699 aaPredicted RBP12.65□□□□□ -0.38
TRDN-205ENST00000546248 MS4A4AQ96JQ5 239 aa12.65□□□□□ -0.38
TRDN-205ENST00000546248 PHF8Q9UPP1 1060 aa12.65□□□□□ -0.38
TRDN-205ENST00000546248 PKD2Q13563 968 aa12.64□□□□□ -0.39
TRDN-205ENST00000546248 MARVELD3Q96A59 401 aa12.63□□□□□ -0.39
TRDN-205ENST00000546248 BCL11BQ9C0K0 894 aaPredicted RBP12.62□□□□□ -0.39
TRDN-205ENST00000546248 MICALL2Q8IY33 904 aa12.6□□□□□ -0.39
TRDN-205ENST00000546248 RGL2O15211 777 aa12.58□□□□□ -0.4
TRDN-205ENST00000546248 STK24Q9Y6E0 443 aa12.58□□□□□ -0.4
TRDN-205ENST00000546248 TAOK2Q9UL54 1235 aa12.57□□□□□ -0.4
TRDN-205ENST00000546248 HOXB3P14651 431 aaPredicted RBP12.56□□□□□ -0.4
TRDN-205ENST00000546248 TMEM92Q6UXU6 159 aa12.56□□□□□ -0.4
TRDN-205ENST00000546248 STK25O00506 426 aa12.54□□□□□ -0.4
TRDN-205ENST00000546248 FBXO22Q8NEZ5 403 aa12.54□□□□□ -0.4
TRDN-205ENST00000546248 EMP3P54852 163 aa12.52□□□□□ -0.41
TRDN-205ENST00000546248 NLRP6P59044 892 aa12.51□□□□□ -0.41
TRDN-205ENST00000546248 MFRPQ9BY79 579 aa12.51□□□□□ -0.41
TRDN-205ENST00000546248 POTEB3A0JP26 581 aa12.49□□□□□ -0.41
TRDN-205ENST00000546248 POTEBQ6S5H4 581 aa12.49□□□□□ -0.41
TRDN-205ENST00000546248 FAM205CA6NFA0 338 aa12.46□□□□□ -0.41
TRDN-205ENST00000546248 DOK7Q18PE1 504 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms