RNA–Protein interactions for RNA: ENST00000546102.1

CUL3-215, Transcript of cullin 3, humanhuman

TSL 4

Gene CUL3, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-215ENST00000546102 CCDC61Q9Y6R9 512 aa8.4□□□□□ -1.06
CUL3-215ENST00000546102 ASTLQ6HA08 431 aaPredicted RBP8.39□□□□□ -1.07
CUL3-215ENST00000546102 METRNQ9UJH8 293 aa8.38□□□□□ -1.07
CUL3-215ENST00000546102 ATMINO43313 823 aaPredicted RBP8.37□□□□□ -1.07
CUL3-215ENST00000546102 C7P10643 843 aa8.37□□□□□ -1.07
CUL3-215ENST00000546102 FKBP8Q14318 412 aa8.36□□□□□ -1.07
CUL3-215ENST00000546102 PELP1Q8IZL8 1130 aaKnown RBP8.35□□□□□ -1.07
CUL3-215ENST00000546102 KIF12Q96FN5 646 aa8.35□□□□□ -1.07
CUL3-215ENST00000546102 MAMSTRQ6ZN01 415 aa8.33□□□□□ -1.08
CUL3-215ENST00000546102 RASEFQ8IZ41 740 aa8.33□□□□□ -1.08
CUL3-215ENST00000546102 OTUD5Q96G74 571 aa8.33□□□□□ -1.08
CUL3-215ENST00000546102 MAP3K13O43283 966 aa8.32□□□□□ -1.08
CUL3-215ENST00000546102 POTEB2H3BUK9 544 aa8.31□□□□□ -1.08
CUL3-215ENST00000546102 TIE1P35590 1138 aa8.3□□□□□ -1.08
CUL3-215ENST00000546102 ATN1P54259 1190 aaPredicted RBP8.3□□□□□ -1.08
CUL3-215ENST00000546102 FAM212AQ96EL1 285 aa8.3□□□□□ -1.08
CUL3-215ENST00000546102 SCUBE2Q9NQ36 999 aa8.29□□□□□ -1.08
CUL3-215ENST00000546102 FBXO3Q9UK99 471 aa8.29□□□□□ -1.08
CUL3-215ENST00000546102 PCDHB13Q9Y5F0 798 aa8.28□□□□□ -1.08
CUL3-215ENST00000546102 SGIP1Q9BQI5 828 aa8.27□□□□□ -1.09
CUL3-215ENST00000546102 BMP2KQ9NSY1 1161 aaPredicted RBP8.27□□□□□ -1.09
CUL3-215ENST00000546102 SEC24BO95487 1268 aa8.26□□□□□ -1.09
CUL3-215ENST00000546102 NUBP1P53384 320 aa8.24□□□□□ -1.09
CUL3-215ENST00000546102 PLSCR2Q9NRY7 297 aa8.23□□□□□ -1.09
CUL3-215ENST00000546102 TRPC6Q9Y210 931 aa8.22□□□□□ -1.09
CUL3-215ENST00000546102 TTLL13PA6NNM8 815 aa8.21□□□□□ -1.1
CUL3-215ENST00000546102 DCAF8Q5TAQ9 597 aa8.21□□□□□ -1.1
CUL3-215ENST00000546102 POTEMA6NI47 508 aa8.19□□□□□ -1.1
CUL3-215ENST00000546102 SLC24A1O60721 1099 aa8.19□□□□□ -1.1
CUL3-215ENST00000546102 TRIM35Q9UPQ4 493 aa8.19□□□□□ -1.1
CUL3-215ENST00000546102 IER5LQ5T953 404 aa8.18□□□□□ -1.1
CUL3-215ENST00000546102 KLHL34Q8N239 644 aa8.18□□□□□ -1.1
CUL3-215ENST00000546102 POTEGQ6S5H5 508 aa8.16□□□□□ -1.1
CUL3-215ENST00000546102 IFNL1Q8IU54 200 aa8.16□□□□□ -1.1
CUL3-215ENST00000546102 TMEM106CQ9BVX2 250 aa8.16□□□□□ -1.1
CUL3-215ENST00000546102 POTEJP0CG39 1038 aa8.15□□□□□ -1.1
CUL3-215ENST00000546102 POTEFA5A3E0 1075 aa8.13□□□□□ -1.11
CUL3-215ENST00000546102 PYGBP11216 843 aa8.13□□□□□ -1.11
CUL3-215ENST00000546102 PLCG2P16885 1265 aa8.13□□□□□ -1.11
CUL3-215ENST00000546102 FAM163AQ96GL9 167 aaPredicted RBP8.13□□□□□ -1.11
CUL3-215ENST00000546102 GSE1Q14687 1217 aa8.12□□□□□ -1.11
CUL3-215ENST00000546102 COLQQ9Y215 455 aaPredicted RBP8.12□□□□□ -1.11
CUL3-215ENST00000546102 PCDH10Q9P2E7 1040 aa8.11□□□□□ -1.11
CUL3-215ENST00000546102 VASPP50552 380 aaPredicted RBP8.1□□□□□ -1.11
CUL3-215ENST00000546102 RTN4Q9NQC3 1192 aaKnown RBP8.09□□□□□ -1.11
CUL3-215ENST00000546102 GOLGA2Q08379 1002 aa8.08□□□□□ -1.12
CUL3-215ENST00000546102 ZNF467Q7Z7K2 595 aaPredicted RBP8.06□□□□□ -1.12
CUL3-215ENST00000546102 SLAIN1Q8ND83 568 aa8.06□□□□□ -1.12
CUL3-215ENST00000546102 PCDHB8Q9UN66 801 aa8.05□□□□□ -1.12
CUL3-215ENST00000546102 AMER1Q5JTC6 1135 aaPredicted RBP8.04□□□□□ -1.12
CUL3-215ENST00000546102 OCEL1Q9H607 264 aa8.04□□□□□ -1.12
CUL3-215ENST00000546102 IRX5P78411 483 aaPredicted RBP8.02□□□□□ -1.13
CUL3-215ENST00000546102 MKRN3Q13064 507 aaKnown RBP8.02□□□□□ -1.13
CUL3-215ENST00000546102 EIF2AK3Q9NZJ5 1116 aaKnown RBP8□□□□□ -1.13
CUL3-215ENST00000546102 CHRM1P11229 460 aaPredicted RBP7.98□□□□□ -1.13
CUL3-215ENST00000546102 SPOCK2Q92563 424 aa7.98□□□□□ -1.13
CUL3-215ENST00000546102 CIZ1Q9ULV3 898 aaPredicted RBP7.98□□□□□ -1.13
CUL3-215ENST00000546102 SNPHO15079 494 aa7.97□□□□□ -1.13
CUL3-215ENST00000546102 LCE2DQ5TA82 110 aaPredicted RBP7.97□□□□□ -1.13
CUL3-215ENST00000546102 PSEN1P49768 467 aa7.95□□□□□ -1.14
CUL3-215ENST00000546102 C3orf67Q6ZVT6 689 aa7.95□□□□□ -1.14
CUL3-215ENST00000546102 L3MBTL3Q96JM7 780 aaPredicted RBP7.95□□□□□ -1.14
CUL3-215ENST00000546102 G3V3G9 751 aa7.93□□□□□ -1.14
CUL3-215ENST00000546102 ST18O60284 1047 aa7.93□□□□□ -1.14
CUL3-215ENST00000546102 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.93□□□□□ -1.145e-10■□□□□ 10.5
CUL3-215ENST00000546102 PDAP1Q13442 181 aaKnown RBP7.92□□□□□ -1.14
CUL3-215ENST00000546102 CDAN1Q8IWY9 1227 aa7.92□□□□□ -1.14
CUL3-215ENST00000546102 IFNLR1Q8IU57 520 aaPredicted RBP7.9□□□□□ -1.14
CUL3-215ENST00000546102 TMEM121BQ9BXQ6 578 aaPredicted RBP7.9□□□□□ -1.14
CUL3-215ENST00000546102 PDCD7Q8N8D1 485 aaKnown RBP7.88□□□□□ -1.15
CUL3-215ENST00000546102 TRIM41Q8WV44 630 aa7.87□□□□□ -1.15
CUL3-215ENST00000546102 CABP2Q9NPB3 220 aa7.87□□□□□ -1.15
CUL3-215ENST00000546102 EMP3P54852 163 aa7.8□□□□□ -1.16
CUL3-215ENST00000546102 MARVELD3Q96A59 401 aa7.8□□□□□ -1.16
CUL3-215ENST00000546102 BOLA1Q9Y3E2 137 aa7.8□□□□□ -1.16
CUL3-215ENST00000546102 DPY19L2Q6NUT2 758 aa7.77□□□□□ -1.17
CUL3-215ENST00000546102 ILDR1Q86SU0 546 aaPredicted RBP7.76□□□□□ -1.17
CUL3-215ENST00000546102 ZNF710Q8N1W2 664 aa7.75□□□□□ -1.17
CUL3-215ENST00000546102 EFCAB3Q8N7B9 438 aa7.74□□□□□ -1.17
CUL3-215ENST00000546102 TAOK2Q9UL54 1235 aa7.73□□□□□ -1.17
CUL3-215ENST00000546102 FAM205CA6NFA0 338 aa7.72□□□□□ -1.17
CUL3-215ENST00000546102 RIOK3O14730 519 aaKnown RBP7.72□□□□□ -1.17
CUL3-215ENST00000546102 RIMBP2O15034 1052 aa7.72□□□□□ -1.17
CUL3-215ENST00000546102 DOK7Q18PE1 504 aa7.72□□□□□ -1.17
CUL3-215ENST00000546102 VGFO15240 615 aaPredicted RBP7.71□□□□□ -1.18
CUL3-215ENST00000546102 SOX12O15370 315 aa7.7□□□□□ -1.18
CUL3-215ENST00000546102 SPNS2Q8IVW8 549 aa7.7□□□□□ -1.18
CUL3-215ENST00000546102 HS3ST6Q96QI5 342 aa7.7□□□□□ -1.18
CUL3-215ENST00000546102 MMRN1Q13201 1228 aa7.68□□□□□ -1.18
CUL3-215ENST00000546102 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.67□□□□□ -1.18
CUL3-215ENST00000546102 ZFP91Q96JP5 570 aaPredicted RBP7.67□□□□□ -1.18
CUL3-215ENST00000546102 ERBB3P21860 1342 aa7.65□□□□□ -1.18
CUL3-215ENST00000546102 HOXB1P14653 301 aaPredicted RBP7.64□□□□□ -1.19
CUL3-215ENST00000546102 MICALL2Q8IY33 904 aa7.64□□□□□ -1.19
CUL3-215ENST00000546102 HOXB3P14651 431 aaPredicted RBP7.63□□□□□ -1.19
CUL3-215ENST00000546102 RNF25Q96BH1 459 aaPredicted RBP7.62□□□□□ -1.19
CUL3-215ENST00000546102 PHF8Q9UPP1 1060 aa7.62□□□□□ -1.19
CUL3-215ENST00000546102 NLRP6P59044 892 aa7.61□□□□□ -1.19
CUL3-215ENST00000546102 ZSWIM6Q9HCJ5 1215 aa7.61□□□□□ -1.19
CUL3-215ENST00000546102 STK24Q9Y6E0 443 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms