RNA–Protein interactions for RNA: ENST00000544639.1

RAP1B-231, Transcript of RAP1B, member of RAS oncogene family, human

TSL 4

Gene RAP1B, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAP1B-231	ENST00000544639	PLCD3	Q8N3E9	789 aa		11.68	□□□□□ -0.54
RAP1B-231	ENST00000544639	IFNLR1	Q8IU57	520 aa	Predicted RBP	11.67	□□□□□ -0.54
RAP1B-231	ENST00000544639	TSPYL2	Q9H2G4	693 aa	Predicted RBP	11.67	□□□□□ -0.54
RAP1B-231	ENST00000544639	ZBTB47	Q9UFB7	747 aa	Predicted RBP	11.67	□□□□□ -0.54
RAP1B-231	ENST00000544639	CCDC61	Q9Y6R9	512 aa		11.66	□□□□□ -0.54
RAP1B-231	ENST00000544639	MS4A3	Q96HJ5	214 aa		11.62	□□□□□ -0.55
RAP1B-231	ENST00000544639	RASEF	Q8IZ41	740 aa		11.6	□□□□□ -0.55
RAP1B-231	ENST00000544639	KIF12	Q96FN5	646 aa		11.58	□□□□□ -0.56
RAP1B-231	ENST00000544639	ASTL	Q6HA08	431 aa	Predicted RBP	11.57	□□□□□ -0.56
RAP1B-231	ENST00000544639	NUBP1	P53384	320 aa		11.55	□□□□□ -0.56
RAP1B-231	ENST00000544639	KLHL34	Q8N239	644 aa		11.53	□□□□□ -0.56
RAP1B-231	ENST00000544639	ATMIN	O43313	823 aa	Predicted RBP	11.52	□□□□□ -0.57
RAP1B-231	ENST00000544639	PELP1	Q8IZL8	1130 aa	Known RBP	11.51	□□□□□ -0.57
RAP1B-231	ENST00000544639	MAP3K13	O43283	966 aa		11.49	□□□□□ -0.57
RAP1B-231	ENST00000544639	SPOCK2	Q92563	424 aa		11.49	□□□□□ -0.57
RAP1B-231	ENST00000544639	SGIP1	Q9BQI5	828 aa		11.49	□□□□□ -0.57
RAP1B-231	ENST00000544639	SLC39A7	Q92504	469 aa		11.48	□□□□□ -0.57
RAP1B-231	ENST00000544639	C7	P10643	843 aa		11.47	□□□□□ -0.57
RAP1B-231	ENST00000544639	FAM212A	Q96EL1	285 aa		11.47	□□□□□ -0.57
RAP1B-231	ENST00000544639	TIE1	P35590	1138 aa		11.45	□□□□□ -0.58
RAP1B-231	ENST00000544639	METRN	Q9UJH8	293 aa		11.44	□□□□□ -0.58
RAP1B-231	ENST00000544639	POTEB2	H3BUK9	544 aa		11.42	□□□□□ -0.58
RAP1B-231	ENST00000544639	ATN1	P54259	1190 aa	Predicted RBP	11.42	□□□□□ -0.58
RAP1B-231	ENST00000544639	BMP2K	Q9NSY1	1161 aa	Predicted RBP	11.42	□□□□□ -0.58
RAP1B-231	ENST00000544639	TRPC6	Q9Y210	931 aa		11.4	□□□□□ -0.58
RAP1B-231	ENST00000544639	PCDHB13	Q9Y5F0	798 aa		11.4	□□□□□ -0.58
RAP1B-231	ENST00000544639	OTUD5	Q96G74	571 aa		11.38	□□□□□ -0.59
RAP1B-231	ENST00000544639	PKD2	Q13563	968 aa		11.37	□□□□□ -0.59
RAP1B-231	ENST00000544639	TTLL13P	A6NNM8	815 aa		11.35	□□□□□ -0.59
RAP1B-231	ENST00000544639	DCAF8	Q5TAQ9	597 aa		11.35	□□□□□ -0.59
RAP1B-231	ENST00000544639	IFNL1	Q8IU54	200 aa		11.33	□□□□□ -0.6
RAP1B-231	ENST00000544639	MAMSTR	Q6ZN01	415 aa		11.3	□□□□□ -0.6
RAP1B-231	ENST00000544639	GSE1	Q14687	1217 aa		11.29	□□□□□ -0.6
RAP1B-231	ENST00000544639	IER5L	Q5T953	404 aa		11.29	□□□□□ -0.6
RAP1B-231	ENST00000544639	POTEF	A5A3E0	1075 aa		11.27	□□□□□ -0.61
RAP1B-231	ENST00000544639	POTEJ	P0CG39	1038 aa		11.27	□□□□□ -0.61
RAP1B-231	ENST00000544639	PYGB	P11216	843 aa		11.27	□□□□□ -0.61
RAP1B-231	ENST00000544639	TRIM35	Q9UPQ4	493 aa		11.27	□□□□□ -0.61
RAP1B-231	ENST00000544639	CIZ1	Q9ULV3	898 aa	Predicted RBP	11.25	□□□□□ -0.61
RAP1B-231	ENST00000544639	TMEM106C	Q9BVX2	250 aa		11.24	□□□□□ -0.61
RAP1B-231	ENST00000544639	ECM2	O94769	699 aa	Predicted RBP	11.23	□□□□□ -0.61
RAP1B-231	ENST00000544639	SEC24B	O95487	1268 aa		11.22	□□□□□ -0.61
RAP1B-231	ENST00000544639	SCUBE2	Q9NQ36	999 aa		11.22	□□□□□ -0.61
RAP1B-231	ENST00000544639	CHRM1	P11229	460 aa	Predicted RBP	11.21	□□□□□ -0.61
RAP1B-231	ENST00000544639	COLQ	Q9Y215	455 aa	Predicted RBP	11.2	□□□□□ -0.62
RAP1B-231	ENST00000544639	ZNF467	Q7Z7K2	595 aa	Predicted RBP	11.18	□□□□□ -0.62
RAP1B-231	ENST00000544639	TRIM41	Q8WV44	630 aa		11.18	□□□□□ -0.62
RAP1B-231	ENST00000544639	PCDHB8	Q9UN66	801 aa		11.17	□□□□□ -0.62
RAP1B-231	ENST00000544639	RGL2	O15211	777 aa		11.14	□□□□□ -0.63
RAP1B-231	ENST00000544639	DCAF8L2	P0C7V8	631 aa		11.12	□□□□□ -0.63
RAP1B-231	ENST00000544639	IRX5	P78411	483 aa	Predicted RBP	11.12	□□□□□ -0.63
RAP1B-231	ENST00000544639	PLCG2	P16885	1265 aa		11.11	□□□□□ -0.63
RAP1B-231	ENST00000544639	OCEL1	Q9H607	264 aa		11.08	□□□□□ -0.64
RAP1B-231	ENST00000544639	RNF25	Q96BH1	459 aa	Predicted RBP	11.05	□□□□□ -0.64
RAP1B-231	ENST00000544639	POTEM	A6NI47	508 aa		11.03	□□□□□ -0.64
RAP1B-231	ENST00000544639	PSEN1	P49768	467 aa		11.03	□□□□□ -0.64
RAP1B-231	ENST00000544639	PDAP1	Q13442	181 aa	Known RBP	11.02	□□□□□ -0.65
RAP1B-231	ENST00000544639	GOLGA2	Q08379	1002 aa		11.01	□□□□□ -0.65
RAP1B-231	ENST00000544639	POTEG	Q6S5H5	508 aa		11.01	□□□□□ -0.65
RAP1B-231	ENST00000544639	MKRN3	Q13064	507 aa	Known RBP	11	□□□□□ -0.65
RAP1B-231	ENST00000544639	RIOK3	O14730	519 aa	Known RBP	10.99	□□□□□ -0.65
RAP1B-231	ENST00000544639	LCE2D	Q5TA82	110 aa	Predicted RBP	10.98	□□□□□ -0.65
RAP1B-231	ENST00000544639	SLAIN1	Q8ND83	568 aa		10.97	□□□□□ -0.65
RAP1B-231	ENST00000544639	FAM163A	Q96GL9	167 aa	Predicted RBP	10.97	□□□□□ -0.65
RAP1B-231	ENST00000544639	PDCD7	Q8N8D1	485 aa	Known RBP	10.96	□□□□□ -0.65
RAP1B-231	ENST00000544639	PCDH10	Q9P2E7	1040 aa		10.95	□□□□□ -0.66
RAP1B-231	ENST00000544639	ILDR1	Q86SU0	546 aa	Predicted RBP	10.93	□□□□□ -0.66
RAP1B-231	ENST00000544639	VGF	O15240	615 aa	Predicted RBP	10.92	□□□□□ -0.66
RAP1B-231	ENST00000544639	CHGA	P10645	457 aa	Known RBP	10.92	□□□□□ -0.66
RAP1B-231	ENST00000544639	L3MBTL3	Q96JM7	780 aa	Predicted RBP	10.92	□□□□□ -0.66
RAP1B-231	ENST00000544639	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	10.92	□□□□□ -0.66
RAP1B-231	ENST00000544639	TAOK2	Q9UL54	1235 aa		10.92	□□□□□ -0.66
RAP1B-231	ENST00000544639	SLC24A1	O60721	1099 aa		10.91	□□□□□ -0.66
RAP1B-231	ENST00000544639	HS6ST3	Q8IZP7	471 aa		10.91	□□□□□ -0.66
RAP1B-231	ENST00000544639	EIF2AK3	Q9NZJ5	1116 aa	Known RBP	10.91	□□□□□ -0.66
RAP1B-231	ENST00000544639	BBX	Q8WY36	941 aa	Predicted RBP	10.9	□□□□□ -0.66
RAP1B-231	ENST00000544639	CABP2	Q9NPB3	220 aa		10.88	□□□□□ -0.67
RAP1B-231	ENST00000544639	PLCB2	Q00722	1185 aa		10.87	□□□□□ -0.67
RAP1B-231	ENST00000544639	C3orf67	Q6ZVT6	689 aa		10.85	□□□□□ -0.67
RAP1B-231	ENST00000544639	ZFP91-CNTF	A0A0A6YYC7	529 aa	Predicted RBP	10.84	□□□□□ -0.67
RAP1B-231	ENST00000544639	SNPH	O15079	494 aa		10.84	□□□□□ -0.67
RAP1B-231	ENST00000544639	ZFP91	Q96JP5	570 aa	Predicted RBP	10.84	□□□□□ -0.67
RAP1B-231	ENST00000544639	PLSCR2	Q9NRY7	297 aa		10.84	□□□□□ -0.67
RAP1B-231	ENST00000544639	STK25	O00506	426 aa		10.83	□□□□□ -0.68
RAP1B-231	ENST00000544639	DNAJC5	Q9H3Z4	198 aa		10.83	□□□□□ -0.68
RAP1B-231	ENST00000544639	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	10.83	□□□□□ -0.68
RAP1B-231	ENST00000544639	ST18	O60284	1047 aa		10.82	□□□□□ -0.68
RAP1B-231	ENST00000544639	BCL11B	Q9C0K0	894 aa	Predicted RBP	10.8	□□□□□ -0.68
RAP1B-231	ENST00000544639	TMEM121B	Q9BXQ6	578 aa	Predicted RBP	10.79	□□□□□ -0.68
RAP1B-231	ENST00000544639	DPY19L2	Q6NUT2	758 aa		10.78	□□□□□ -0.68
RAP1B-231	ENST00000544639	STK24	Q9Y6E0	443 aa		10.78	□□□□□ -0.68
RAP1B-231	ENST00000544639	EFCAB3	Q8N7B9	438 aa		10.77	□□□□□ -0.69
RAP1B-231	ENST00000544639	BOLA1	Q9Y3E2	137 aa		10.77	□□□□□ -0.69
RAP1B-231	ENST00000544639		G3V3G9	751 aa		10.76	□□□□□ -0.69
RAP1B-231	ENST00000544639	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	10.76	□□□□□ -0.69
RAP1B-231	ENST00000544639	NKX1-1	Q15270	411 aa	Predicted RBP	10.75	□□□□□ -0.69
RAP1B-231	ENST00000544639	SOX12	O15370	315 aa		10.73	□□□□□ -0.69
RAP1B-231	ENST00000544639	SPRYD3	Q8NCJ5	442 aa		10.73	□□□□□ -0.69
RAP1B-231	ENST00000544639	CFAP44	Q96MT7	982 aa		10.73	□□□□□ -0.69
RAP1B-231	ENST00000544639	CDAN1	Q8IWY9	1227 aa		10.7	□□□□□ -0.7

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