RNA–Protein interactions for RNA: ENST00000544400.1

DDX47-210, Transcript of DEAD-box helicase 47, humanhuman

TSL 3

Gene DDX47, Length 597 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47-210ENST00000544400 PLSCR2Q9NRY7 297 aa10.33□□□□□ -0.76
DDX47-210ENST00000544400 POTEB2H3BUK9 544 aa10.3□□□□□ -0.76
DDX47-210ENST00000544400 PELP1Q8IZL8 1130 aaKnown RBP10.3□□□□□ -0.76
DDX47-210ENST00000544400 PROM2Q8N271 834 aa10.3□□□□□ -0.76
DDX47-210ENST00000544400 SLC39A7Q92504 469 aa10.3□□□□□ -0.76
DDX47-210ENST00000544400 C7P10643 843 aa10.29□□□□□ -0.76
DDX47-210ENST00000544400 ASTLQ6HA08 431 aaPredicted RBP10.29□□□□□ -0.76
DDX47-210ENST00000544400 MIER1Q8N108 512 aa10.29□□□□□ -0.76
DDX47-210ENST00000544400 METRNQ9UJH8 293 aa10.29□□□□□ -0.76
DDX47-210ENST00000544400 ATMINO43313 823 aaPredicted RBP10.27□□□□□ -0.77
DDX47-210ENST00000544400 CCDC61Q9Y6R9 512 aa10.25□□□□□ -0.77
DDX47-210ENST00000544400 MAMSTRQ6ZN01 415 aa10.23□□□□□ -0.77
DDX47-210ENST00000544400 PLCD3Q8N3E9 789 aa10.2□□□□□ -0.78
DDX47-210ENST00000544400 KIF12Q96FN5 646 aa10.2□□□□□ -0.78
DDX47-210ENST00000544400 POTEMA6NI47 508 aa10.18□□□□□ -0.78
DDX47-210ENST00000544400 ATN1P54259 1190 aaPredicted RBP10.18□□□□□ -0.78
DDX47-210ENST00000544400 SCUBE2Q9NQ36 999 aa10.17□□□□□ -0.78
DDX47-210ENST00000544400 MAP3K13O43283 966 aa10.15□□□□□ -0.78
DDX47-210ENST00000544400 POTEGQ6S5H5 508 aa10.15□□□□□ -0.78
DDX47-210ENST00000544400 ZBTB47Q9UFB7 747 aaPredicted RBP10.14□□□□□ -0.79
DDX47-210ENST00000544400 RASEFQ8IZ41 740 aa10.13□□□□□ -0.79
DDX47-210ENST00000544400 BMP2KQ9NSY1 1161 aaPredicted RBP10.13□□□□□ -0.79
DDX47-210ENST00000544400 TIE1P35590 1138 aa10.12□□□□□ -0.79
DDX47-210ENST00000544400 SHROOM4Q9ULL8 1493 aa10.11□□□□□ -0.79
DDX47-210ENST00000544400 SEC24BO95487 1268 aa10.11□□□□□ -0.79
DDX47-210ENST00000544400 MYO15BQ96JP2 1530 aa10.11□□□□□ -0.79
DDX47-210ENST00000544400 POTEJP0CG39 1038 aa10.1□□□□□ -0.79
DDX47-210ENST00000544400 FAM163AQ96GL9 167 aaPredicted RBP10.08□□□□□ -0.8
DDX47-210ENST00000544400 TRPC6Q9Y210 931 aa10.08□□□□□ -0.8
DDX47-210ENST00000544400 PCDH10Q9P2E7 1040 aa10.07□□□□□ -0.8
DDX47-210ENST00000544400 PCDHB13Q9Y5F0 798 aa10.07□□□□□ -0.8
DDX47-210ENST00000544400 SGIP1Q9BQI5 828 aa10.06□□□□□ -0.8
DDX47-210ENST00000544400 TTLL13PA6NNM8 815 aa10.04□□□□□ -0.8
DDX47-210ENST00000544400 FAM212AQ96EL1 285 aa10.03□□□□□ -0.8
DDX47-210ENST00000544400 POTEFA5A3E0 1075 aa10.01□□□□□ -0.81
DDX47-210ENST00000544400 TRIM35Q9UPQ4 493 aa10.01□□□□□ -0.81
DDX47-210ENST00000544400 NUBP1P53384 320 aa9.99□□□□□ -0.81
DDX47-210ENST00000544400 FKBP8Q14318 412 aa9.99□□□□□ -0.81
DDX47-210ENST00000544400 IER5LQ5T953 404 aa9.99□□□□□ -0.81
DDX47-210ENST00000544400 COLQQ9Y215 455 aaPredicted RBP9.98□□□□□ -0.81
DDX47-210ENST00000544400 IFNL1Q8IU54 200 aa9.96□□□□□ -0.82
DDX47-210ENST00000544400 ABCC9O60706 1549 aa9.94□□□□□ -0.82
DDX47-210ENST00000544400 TMEM106CQ9BVX2 250 aa9.94□□□□□ -0.82
DDX47-210ENST00000544400 SUPT5HO00267 1087 aaKnown RBP9.93□□□□□ -0.82
DDX47-210ENST00000544400 DCAF8Q5TAQ9 597 aa9.93□□□□□ -0.82
DDX47-210ENST00000544400 PLCG2P16885 1265 aa9.91□□□□□ -0.82
DDX47-210ENST00000544400 LCE2DQ5TA82 110 aaPredicted RBP9.9□□□□□ -0.82
DDX47-210ENST00000544400 FBXO3Q9UK99 471 aa9.9□□□□□ -0.82
DDX47-210ENST00000544400 SLAIN1Q8ND83 568 aa9.89□□□□□ -0.83
DDX47-210ENST00000544400 PYGBP11216 843 aa9.86□□□□□ -0.83
DDX47-210ENST00000544400 NACADO15069 1562 aa9.85□□□□□ -0.83
DDX47-210ENST00000544400 KLHL34Q8N239 644 aa9.82□□□□□ -0.84
DDX47-210ENST00000544400 OCEL1Q9H607 264 aa9.82□□□□□ -0.84
DDX47-210ENST00000544400 CDAN1Q8IWY9 1227 aa9.81□□□□□ -0.84
DDX47-210ENST00000544400 DCAF8L2P0C7V8 631 aa9.8□□□□□ -0.84
DDX47-210ENST00000544400 IRX5P78411 483 aaPredicted RBP9.8□□□□□ -0.84
DDX47-210ENST00000544400 PCDHB8Q9UN66 801 aa9.79□□□□□ -0.84
DDX47-210ENST00000544400 GOLGA2Q08379 1002 aa9.78□□□□□ -0.84
DDX47-210ENST00000544400 ST18O60284 1047 aa9.77□□□□□ -0.85
DDX47-210ENST00000544400 GSE1Q14687 1217 aa9.77□□□□□ -0.85
DDX47-210ENST00000544400 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.77□□□□□ -0.85
DDX47-210ENST00000544400 SNPHO15079 494 aa9.76□□□□□ -0.85
DDX47-210ENST00000544400 ZNF467Q7Z7K2 595 aaPredicted RBP9.74□□□□□ -0.85
DDX47-210ENST00000544400 SCRIBQ14160 1630 aa9.74□□□□□ -0.85
DDX47-210ENST00000544400 MKRN3Q13064 507 aaKnown RBP9.73□□□□□ -0.85
DDX47-210ENST00000544400 RB1CC1Q8TDY2 1594 aa9.71□□□□□ -0.85
DDX47-210ENST00000544400 VASPP50552 380 aaPredicted RBP9.71□□□□□ -0.86
DDX47-210ENST00000544400 TMEM121BQ9BXQ6 578 aaPredicted RBP9.7□□□□□ -0.86
DDX47-210ENST00000544400 C3orf67Q6ZVT6 689 aa9.69□□□□□ -0.86
DDX47-210ENST00000544400 L3MBTL3Q96JM7 780 aaPredicted RBP9.68□□□□□ -0.86
DDX47-210ENST00000544400 RSF1Q96T23 1441 aaPredicted RBP9.66□□□□□ -0.86
DDX47-210ENST00000544400 CHRM1P11229 460 aaPredicted RBP9.65□□□□□ -0.86
DDX47-210ENST00000544400 PSEN1P49768 467 aa9.64□□□□□ -0.87
DDX47-210ENST00000544400 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.64□□□□□ -0.879e-9■□□□□ 9.1
DDX47-210ENST00000544400 MARVELD3Q96A59 401 aa9.62□□□□□ -0.87
DDX47-210ENST00000544400 G3V3G9 751 aa9.61□□□□□ -0.87
DDX47-210ENST00000544400 PDCD7Q8N8D1 485 aaKnown RBP9.61□□□□□ -0.87
DDX47-210ENST00000544400 CIZ1Q9ULV3 898 aaPredicted RBP9.6□□□□□ -0.87
DDX47-210ENST00000544400 PDAP1Q13442 181 aaKnown RBP9.58□□□□□ -0.88
DDX47-210ENST00000544400 BAZ1AQ9NRL2 1556 aaPredicted RBP9.58□□□□□ -0.88
DDX47-210ENST00000544400 EMP3P54852 163 aa9.56□□□□□ -0.88
DDX47-210ENST00000544400 SPOCK2Q92563 424 aa9.56□□□□□ -0.88
DDX47-210ENST00000544400 MMRN1Q13201 1228 aa9.54□□□□□ -0.88
DDX47-210ENST00000544400 SPNS2Q8IVW8 549 aa9.54□□□□□ -0.88
DDX47-210ENST00000544400 CABP2Q9NPB3 220 aa9.53□□□□□ -0.88
DDX47-210ENST00000544400 HRCP23327 699 aa9.52□□□□□ -0.89
DDX47-210ENST00000544400 FAM205CA6NFA0 338 aa9.49□□□□□ -0.89
DDX47-210ENST00000544400 IFNLR1Q8IU57 520 aaPredicted RBP9.49□□□□□ -0.89
DDX47-210ENST00000544400 BOLA1Q9Y3E2 137 aa9.49□□□□□ -0.89
DDX47-210ENST00000544400 DPY19L2Q6NUT2 758 aa9.48□□□□□ -0.89
DDX47-210ENST00000544400 MROH2BQ7Z745 1585 aa9.48□□□□□ -0.89
DDX47-210ENST00000544400 HS3ST6Q96QI5 342 aa9.47□□□□□ -0.89
DDX47-210ENST00000544400 EIF4G1Q04637 1599 aaKnown RBP9.46□□□□□ -0.89
DDX47-210ENST00000544400 SLC24A1O60721 1099 aa9.46□□□□□ -0.9
DDX47-210ENST00000544400 AMER1Q5JTC6 1135 aaPredicted RBP9.46□□□□□ -0.9
DDX47-210ENST00000544400 ZNF710Q8N1W2 664 aa9.46□□□□□ -0.9
DDX47-210ENST00000544400 TOP2AP11388 1531 aaKnown RBP9.46□□□□□ -0.9
DDX47-210ENST00000544400 ILDR1Q86SU0 546 aaPredicted RBP9.45□□□□□ -0.9
DDX47-210ENST00000544400 WIZO95785 1651 aa9.45□□□□□ -0.9
DDX47-210ENST00000544400 RTN4Q9NQC3 1192 aaKnown RBP9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms