RNA–Protein interactions for RNA: ENST00000544131.1

CCDC170-203, Transcript of coiled-coil domain containing 170, humanhuman

TSL 4

Gene CCDC170, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC170-203ENST00000544131 PLEKHG5O94827 1062 aa11.65□□□□□ -0.54
CCDC170-203ENST00000544131 FKBP8Q14318 412 aa11.65□□□□□ -0.54
CCDC170-203ENST00000544131 MIER1Q8N108 512 aa11.65□□□□□ -0.54
CCDC170-203ENST00000544131 ATMINO43313 823 aaPredicted RBP11.64□□□□□ -0.55
CCDC170-203ENST00000544131 METRNQ9UJH8 293 aa11.62□□□□□ -0.55
CCDC170-203ENST00000544131 KIF12Q96FN5 646 aa11.6□□□□□ -0.55
CCDC170-203ENST00000544131 RASEFQ8IZ41 740 aa11.59□□□□□ -0.55
CCDC170-203ENST00000544131 SLC39A7Q92504 469 aa11.59□□□□□ -0.55
CCDC170-203ENST00000544131 C7P10643 843 aa11.57□□□□□ -0.56
CCDC170-203ENST00000544131 PLCD3Q8N3E9 789 aa11.55□□□□□ -0.56
CCDC170-203ENST00000544131 ATN1P54259 1190 aaPredicted RBP11.54□□□□□ -0.56
CCDC170-203ENST00000544131 MAP3K13O43283 966 aa11.53□□□□□ -0.56
CCDC170-203ENST00000544131 TRPC6Q9Y210 931 aa11.53□□□□□ -0.56
CCDC170-203ENST00000544131 BMP2KQ9NSY1 1161 aaPredicted RBP11.52□□□□□ -0.57
CCDC170-203ENST00000544131 POTEJP0CG39 1038 aa11.51□□□□□ -0.57
CCDC170-203ENST00000544131 TIE1P35590 1138 aa11.46□□□□□ -0.57
CCDC170-203ENST00000544131 ZBTB47Q9UFB7 747 aaPredicted RBP11.46□□□□□ -0.57
CCDC170-203ENST00000544131 NUBP1P53384 320 aa11.45□□□□□ -0.58
CCDC170-203ENST00000544131 MAMSTRQ6ZN01 415 aa11.43□□□□□ -0.58
CCDC170-203ENST00000544131 POTEFA5A3E0 1075 aa11.42□□□□□ -0.58
CCDC170-203ENST00000544131 TTLL13PA6NNM8 815 aa11.42□□□□□ -0.58
CCDC170-203ENST00000544131 PLSCR2Q9NRY7 297 aa11.41□□□□□ -0.58
CCDC170-203ENST00000544131 PCDHB13Q9Y5F0 798 aa11.41□□□□□ -0.58
CCDC170-203ENST00000544131 POTEMA6NI47 508 aa11.39□□□□□ -0.59
CCDC170-203ENST00000544131 SGIP1Q9BQI5 828 aa11.39□□□□□ -0.59
CCDC170-203ENST00000544131 SCUBE2Q9NQ36 999 aa11.38□□□□□ -0.59
CCDC170-203ENST00000544131 FAM212AQ96EL1 285 aa11.37□□□□□ -0.59
CCDC170-203ENST00000544131 POTEGQ6S5H5 508 aa11.36□□□□□ -0.59
CCDC170-203ENST00000544131 COLQQ9Y215 455 aaPredicted RBP11.35□□□□□ -0.59
CCDC170-203ENST00000544131 IFNL1Q8IU54 200 aa11.34□□□□□ -0.59
CCDC170-203ENST00000544131 TRIM35Q9UPQ4 493 aa11.34□□□□□ -0.59
CCDC170-203ENST00000544131 SEC24BO95487 1268 aa11.33□□□□□ -0.6
CCDC170-203ENST00000544131 IER5LQ5T953 404 aa11.3□□□□□ -0.6
CCDC170-203ENST00000544131 LCE2DQ5TA82 110 aaPredicted RBP11.28□□□□□ -0.6
CCDC170-203ENST00000544131 TMEM106CQ9BVX2 250 aa11.27□□□□□ -0.61
CCDC170-203ENST00000544131 FBXO3Q9UK99 471 aa11.27□□□□□ -0.61
CCDC170-203ENST00000544131 FAM163AQ96GL9 167 aaPredicted RBP11.25□□□□□ -0.61
CCDC170-203ENST00000544131 DCAF8Q5TAQ9 597 aa11.24□□□□□ -0.61
CCDC170-203ENST00000544131 PYGBP11216 843 aa11.23□□□□□ -0.61
CCDC170-203ENST00000544131 PLCG2P16885 1265 aa11.17□□□□□ -0.62
CCDC170-203ENST00000544131 VASPP50552 380 aaPredicted RBP11.17□□□□□ -0.62
CCDC170-203ENST00000544131 PCDH10Q9P2E7 1040 aa11.17□□□□□ -0.62
CCDC170-203ENST00000544131 PCDHB8Q9UN66 801 aa11.17□□□□□ -0.62
CCDC170-203ENST00000544131 IRX5P78411 483 aaPredicted RBP11.16□□□□□ -0.62
CCDC170-203ENST00000544131 KLHL34Q8N239 644 aa11.14□□□□□ -0.63
CCDC170-203ENST00000544131 SLAIN1Q8ND83 568 aa11.13□□□□□ -0.63
CCDC170-203ENST00000544131 OCEL1Q9H607 264 aa11.1□□□□□ -0.63
CCDC170-203ENST00000544131 GSE1Q14687 1217 aa11.09□□□□□ -0.63
CCDC170-203ENST00000544131 ZNF467Q7Z7K2 595 aaPredicted RBP11.05□□□□□ -0.64
CCDC170-203ENST00000544131 ST18O60284 1047 aa11.02□□□□□ -0.65
CCDC170-203ENST00000544131 CHRM1P11229 460 aaPredicted RBP11.01□□□□□ -0.65
CCDC170-203ENST00000544131 PDCD7Q8N8D1 485 aaKnown RBP10.99□□□□□ -0.65
CCDC170-203ENST00000544131 GOLGA2Q08379 1002 aa10.98□□□□□ -0.65
CCDC170-203ENST00000544131 CDAN1Q8IWY9 1227 aa10.98□□□□□ -0.65
CCDC170-203ENST00000544131 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.98□□□□□ -0.65
CCDC170-203ENST00000544131 PSEN1P49768 467 aa10.97□□□□□ -0.65
CCDC170-203ENST00000544131 MKRN3Q13064 507 aaKnown RBP10.96□□□□□ -0.65
CCDC170-203ENST00000544131 IFNLR1Q8IU57 520 aaPredicted RBP10.95□□□□□ -0.66
CCDC170-203ENST00000544131 SPOCK2Q92563 424 aa10.94□□□□□ -0.66
CCDC170-203ENST00000544131 SNPHO15079 494 aa10.91□□□□□ -0.66
CCDC170-203ENST00000544131 PDAP1Q13442 181 aaKnown RBP10.91□□□□□ -0.66
CCDC170-203ENST00000544131 C3orf67Q6ZVT6 689 aa10.91□□□□□ -0.66
CCDC170-203ENST00000544131 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.91□□□□□ -0.66
CCDC170-203ENST00000544131 CIZ1Q9ULV3 898 aaPredicted RBP10.91□□□□□ -0.66
CCDC170-203ENST00000544131 TMEM121BQ9BXQ6 578 aaPredicted RBP10.9□□□□□ -0.66
CCDC170-203ENST00000544131 L3MBTL3Q96JM7 780 aaPredicted RBP10.89□□□□□ -0.67
CCDC170-203ENST00000544131 ILDR1Q86SU0 546 aaPredicted RBP10.85□□□□□ -0.67
CCDC170-203ENST00000544131 MARVELD3Q96A59 401 aa10.85□□□□□ -0.67
CCDC170-203ENST00000544131 CABP2Q9NPB3 220 aa10.84□□□□□ -0.67
CCDC170-203ENST00000544131 DPY19L2Q6NUT2 758 aa10.81□□□□□ -0.68
CCDC170-203ENST00000544131 EMP3P54852 163 aa10.75□□□□□ -0.69
CCDC170-203ENST00000544131 BOLA1Q9Y3E2 137 aa10.75□□□□□ -0.69
CCDC170-203ENST00000544131 G3V3G9 751 aa10.74□□□□□ -0.69
CCDC170-203ENST00000544131 TRIM41Q8WV44 630 aa10.74□□□□□ -0.69
CCDC170-203ENST00000544131 SPNS2Q8IVW8 549 aa10.71□□□□□ -0.69
CCDC170-203ENST00000544131 MMRN1Q13201 1228 aa10.7□□□□□ -0.7
CCDC170-203ENST00000544131 EFCAB3Q8N7B9 438 aa10.69□□□□□ -0.7
CCDC170-203ENST00000544131 POTEB3A0JP26 581 aa10.68□□□□□ -0.7
CCDC170-203ENST00000544131 POTEBQ6S5H4 581 aa10.68□□□□□ -0.7
CCDC170-203ENST00000544131 FAM205CA6NFA0 338 aa10.67□□□□□ -0.7
CCDC170-203ENST00000544131 HS3ST6Q96QI5 342 aa10.67□□□□□ -0.7
CCDC170-203ENST00000544131 HOXB3P14651 431 aaPredicted RBP10.66□□□□□ -0.7
CCDC170-203ENST00000544131 RIOK3O14730 519 aaKnown RBP10.63□□□□□ -0.71
CCDC170-203ENST00000544131 RNF25Q96BH1 459 aaPredicted RBP10.63□□□□□ -0.71
CCDC170-203ENST00000544131 KRTAP3-3Q9BYR6 98 aa10.63□□□□□ -0.71
CCDC170-203ENST00000544131 KRTAP3-2Q9BYR7 98 aa10.63□□□□□ -0.71
CCDC170-203ENST00000544131 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.6□□□□□ -0.71
CCDC170-203ENST00000544131 ZNF710Q8N1W2 664 aa10.6□□□□□ -0.71
CCDC170-203ENST00000544131 ZFP91Q96JP5 570 aaPredicted RBP10.6□□□□□ -0.71
CCDC170-203ENST00000544131 DOK7Q18PE1 504 aa10.59□□□□□ -0.71
CCDC170-203ENST00000544131 MICALL2Q8IY33 904 aa10.59□□□□□ -0.71
CCDC170-203ENST00000544131 HOXB1P14653 301 aaPredicted RBP10.58□□□□□ -0.72
CCDC170-203ENST00000544131 VGFO15240 615 aaPredicted RBP10.57□□□□□ -0.72
CCDC170-203ENST00000544131 SOX12O15370 315 aa10.56□□□□□ -0.72
CCDC170-203ENST00000544131 TMEM92Q6UXU6 159 aa10.56□□□□□ -0.72
CCDC170-203ENST00000544131 MS4A4AQ96JQ5 239 aa10.56□□□□□ -0.72
CCDC170-203ENST00000544131 PHF8Q9UPP1 1060 aa10.54□□□□□ -0.72
CCDC170-203ENST00000544131 RIMBP2O15034 1052 aa10.52□□□□□ -0.73
CCDC170-203ENST00000544131 ERBB3P21860 1342 aa10.52□□□□□ -0.73
CCDC170-203ENST00000544131 ECM2O94769 699 aaPredicted RBP10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms