RNA–Protein interactions for RNA: ENST00000544052.6

SCFD1-207, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-207ENST00000544052 NPM1P06748 294 aaKnown RBP eCLIP8.79□□□□□ -1
SCFD1-207ENST00000544052 PAK3O75914 559 aaPredicted RBP8.79□□□□□ -1
SCFD1-207ENST00000544052 HAP1P54257 671 aaPredicted RBP8.79□□□□□ -1
SCFD1-207ENST00000544052 RGL2O15211 777 aa8.76□□□□□ -1.01
SCFD1-207ENST00000544052 POTEIP0CG38 1075 aa8.76□□□□□ -1.01
SCFD1-207ENST00000544052 LHX8Q68G74 356 aa8.76□□□□□ -1.01
SCFD1-207ENST00000544052 MNX1P50219 401 aaPredicted RBP8.76□□□□□ -1.01
SCFD1-207ENST00000544052 DCBLD2Q96PD2 775 aa8.75□□□□□ -1.01
SCFD1-207ENST00000544052 CIZ1Q9ULV3 898 aaPredicted RBP8.73□□□□□ -1.01
SCFD1-207ENST00000544052 PLEKHG5O94827 1062 aa8.71□□□□□ -1.01
SCFD1-207ENST00000544052 GALR2O43603 387 aaPredicted RBP8.69□□□□□ -1.02
SCFD1-207ENST00000544052 PHF12Q96QT6 1004 aa8.69□□□□□ -1.02
SCFD1-207ENST00000544052 ZBTB47Q9UFB7 747 aaPredicted RBP8.69□□□□□ -1.02
SCFD1-207ENST00000544052 BBXQ8WY36 941 aaPredicted RBP8.68□□□□□ -1.02
SCFD1-207ENST00000544052 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.67□□□□□ -1.02
SCFD1-207ENST00000544052 PAXIP1Q6ZW49 1069 aaPredicted RBP8.66□□□□□ -1.02
SCFD1-207ENST00000544052 CFAP44Q96MT7 982 aa8.65□□□□□ -1.02
SCFD1-207ENST00000544052 CHGAP10645 457 aaKnown RBP8.62□□□□□ -1.03
SCFD1-207ENST00000544052 VSIG10Q8N0Z9 540 aa8.61□□□□□ -1.03
SCFD1-207ENST00000544052 TSPYL2Q9H2G4 693 aaPredicted RBP8.6□□□□□ -1.03
SCFD1-207ENST00000544052 NUBP1P53384 320 aa8.6□□□□□ -1.03
SCFD1-207ENST00000544052 KDM2AQ9Y2K7 1162 aa8.6□□□□□ -1.03
SCFD1-207ENST00000544052 RNF25Q96BH1 459 aaPredicted RBP8.58□□□□□ -1.04
SCFD1-207ENST00000544052 MS4A3Q96HJ5 214 aa8.58□□□□□ -1.04
SCFD1-207ENST00000544052 SPRYD3Q8NCJ5 442 aa8.57□□□□□ -1.04
SCFD1-207ENST00000544052 CCDC61Q9Y6R9 512 aa8.56□□□□□ -1.04
SCFD1-207ENST00000544052 GSE1Q14687 1217 aa8.55□□□□□ -1.04
SCFD1-207ENST00000544052 DCAF8Q5TAQ9 597 aa8.55□□□□□ -1.04
SCFD1-207ENST00000544052 TRIM41Q8WV44 630 aa8.55□□□□□ -1.04
SCFD1-207ENST00000544052 TSHZ2Q9NRE2 1034 aa8.54□□□□□ -1.04
SCFD1-207ENST00000544052 ASTLQ6HA08 431 aaPredicted RBP8.53□□□□□ -1.04
SCFD1-207ENST00000544052 BCANQ96GW7 911 aa8.52□□□□□ -1.05
SCFD1-207ENST00000544052 RASEFQ8IZ41 740 aa8.52□□□□□ -1.05
SCFD1-207ENST00000544052 PELP1Q8IZL8 1130 aaKnown RBP8.52□□□□□ -1.05
SCFD1-207ENST00000544052 KIF12Q96FN5 646 aa8.52□□□□□ -1.05
SCFD1-207ENST00000544052 ATMINO43313 823 aaPredicted RBP8.51□□□□□ -1.05
SCFD1-207ENST00000544052 HS6ST3Q8IZP7 471 aa8.5□□□□□ -1.05
SCFD1-207ENST00000544052 SLC39A7Q92504 469 aa8.49□□□□□ -1.05
SCFD1-207ENST00000544052 FAM212AQ96EL1 285 aa8.48□□□□□ -1.05
SCFD1-207ENST00000544052 C7P10643 843 aa8.47□□□□□ -1.05
SCFD1-207ENST00000544052 METRNQ9UJH8 293 aa8.47□□□□□ -1.05
SCFD1-207ENST00000544052 POTEB2H3BUK9 544 aa8.47□□□□□ -1.05
SCFD1-207ENST00000544052 RIOK3O14730 519 aaKnown RBP8.47□□□□□ -1.05
SCFD1-207ENST00000544052 MAP3K13O43283 966 aa8.45□□□□□ -1.06
SCFD1-207ENST00000544052 NKX1-1Q15270 411 aaPredicted RBP8.45□□□□□ -1.06
SCFD1-207ENST00000544052 OTUD5Q96G74 571 aa8.45□□□□□ -1.06
SCFD1-207ENST00000544052 PRKCSHP14314 528 aaPredicted RBP8.45□□□□□ -1.06
SCFD1-207ENST00000544052 ATN1P54259 1190 aaPredicted RBP8.44□□□□□ -1.06
SCFD1-207ENST00000544052 PYGBP11216 843 aa8.42□□□□□ -1.06
SCFD1-207ENST00000544052 TIE1P35590 1138 aa8.42□□□□□ -1.06
SCFD1-207ENST00000544052 STK25O00506 426 aa8.42□□□□□ -1.06
SCFD1-207ENST00000544052 BMP2KQ9NSY1 1161 aaPredicted RBP8.42□□□□□ -1.06
SCFD1-207ENST00000544052 SGIP1Q9BQI5 828 aa8.41□□□□□ -1.06
SCFD1-207ENST00000544052 DNAJC5Q9H3Z4 198 aa8.41□□□□□ -1.06
SCFD1-207ENST00000544052 TAOK2Q9UL54 1235 aa8.41□□□□□ -1.06
SCFD1-207ENST00000544052 TRPC6Q9Y210 931 aa8.41□□□□□ -1.06
SCFD1-207ENST00000544052 CHRM1P11229 460 aaPredicted RBP8.4□□□□□ -1.06
SCFD1-207ENST00000544052 VGFO15240 615 aaPredicted RBP8.39□□□□□ -1.07
SCFD1-207ENST00000544052 GTPBP6O43824 516 aaPredicted RBP8.38□□□□□ -1.07
SCFD1-207ENST00000544052 PCDHB13Q9Y5F0 798 aa8.38□□□□□ -1.07
SCFD1-207ENST00000544052 MAMSTRQ6ZN01 415 aa8.38□□□□□ -1.07
SCFD1-207ENST00000544052 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.37□□□□□ -1.07
SCFD1-207ENST00000544052 ZFP91Q96JP5 570 aaPredicted RBP8.37□□□□□ -1.07
SCFD1-207ENST00000544052 BCL11BQ9C0K0 894 aaPredicted RBP8.36□□□□□ -1.07
SCFD1-207ENST00000544052 TTLL13PA6NNM8 815 aa8.36□□□□□ -1.07
SCFD1-207ENST00000544052 STK24Q9Y6E0 443 aa8.36□□□□□ -1.07
SCFD1-207ENST00000544052 POTEJP0CG39 1038 aa8.34□□□□□ -1.07
SCFD1-207ENST00000544052 TPRNQ4KMQ1 711 aa8.32□□□□□ -1.08
SCFD1-207ENST00000544052 IFNL1Q8IU54 200 aa8.32□□□□□ -1.08
SCFD1-207ENST00000544052 SCUBE2Q9NQ36 999 aa8.32□□□□□ -1.08
SCFD1-207ENST00000544052 POTEFA5A3E0 1075 aa8.31□□□□□ -1.08
SCFD1-207ENST00000544052 SEC24BO95487 1268 aa8.31□□□□□ -1.08
SCFD1-207ENST00000544052 IER5LQ5T953 404 aa8.31□□□□□ -1.08
SCFD1-207ENST00000544052 TRIM35Q9UPQ4 493 aa8.31□□□□□ -1.08
SCFD1-207ENST00000544052 TMEM106CQ9BVX2 250 aa8.28□□□□□ -1.08
SCFD1-207ENST00000544052 COLQQ9Y215 455 aaPredicted RBP8.28□□□□□ -1.08
SCFD1-207ENST00000544052 PCDHB8Q9UN66 801 aa8.26□□□□□ -1.09
SCFD1-207ENST00000544052 POTEMA6NI47 508 aa8.24□□□□□ -1.09
SCFD1-207ENST00000544052 NBR1Q14596 966 aa8.23□□□□□ -1.09
SCFD1-207ENST00000544052 ZNF467Q7Z7K2 595 aaPredicted RBP8.23□□□□□ -1.09
SCFD1-207ENST00000544052 POTEGQ6S5H5 508 aa8.22□□□□□ -1.09
SCFD1-207ENST00000544052 PLCG2P16885 1265 aa8.21□□□□□ -1.1
SCFD1-207ENST00000544052 PDAP1Q13442 181 aaKnown RBP8.2□□□□□ -1.1
SCFD1-207ENST00000544052 RYDENQ9NUL5 291 aaKnown RBP8.2□□□□□ -1.1
SCFD1-207ENST00000544052 PLSCR2Q9NRY7 297 aa8.2□□□□□ -1.1
SCFD1-207ENST00000544052 IRX5P78411 483 aaPredicted RBP8.18□□□□□ -1.1
SCFD1-207ENST00000544052 FAM163AQ96GL9 167 aaPredicted RBP8.18□□□□□ -1.1
SCFD1-207ENST00000544052 PSEN1P49768 467 aa8.17□□□□□ -1.1
SCFD1-207ENST00000544052 CADPS2Q86UW7 1296 aa8.17□□□□□ -1.1
SCFD1-207ENST00000544052 LCE2DQ5TA82 110 aaPredicted RBP8.15□□□□□ -1.1
SCFD1-207ENST00000544052 MFRPQ9BY79 579 aa8.15□□□□□ -1.1
SCFD1-207ENST00000544052 OCEL1Q9H607 264 aa8.15□□□□□ -1.1
SCFD1-207ENST00000544052 PCDH10Q9P2E7 1040 aa8.15□□□□□ -1.11
SCFD1-207ENST00000544052 SLAIN1Q8ND83 568 aa8.13□□□□□ -1.11
SCFD1-207ENST00000544052 GOLGA2Q08379 1002 aa8.1□□□□□ -1.11
SCFD1-207ENST00000544052 EFCAB3Q8N7B9 438 aa8.1□□□□□ -1.11
SCFD1-207ENST00000544052 PPP1R37O75864 691 aa8.1□□□□□ -1.11
SCFD1-207ENST00000544052 MKRN3Q13064 507 aaKnown RBP8.09□□□□□ -1.11
SCFD1-207ENST00000544052 CABP2Q9NPB3 220 aa8.09□□□□□ -1.11
SCFD1-207ENST00000544052 KCNV2Q8TDN2 545 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms