RNA–Protein interactions for RNA: ENST00000543991.1

SMCO2-206, Transcript of single-pass membrane protein with coiled-coil domains 2, humanhuman

TSL 3

Gene SMCO2, Length 486 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO2-206ENST00000543991 MNX1P50219 401 aaPredicted RBP14.74□□□□□ -0.05
SMCO2-206ENST00000543991 HS6ST3Q8IZP7 471 aa14.72□□□□□ -0.05
SMCO2-206ENST00000543991 RNF25Q96BH1 459 aaPredicted RBP14.72□□□□□ -0.05
SMCO2-206ENST00000543991 FAM212AQ96EL1 285 aa14.72□□□□□ -0.05
SMCO2-206ENST00000543991 BCANQ96GW7 911 aa14.7□□□□□ -0.06
SMCO2-206ENST00000543991 KDM2AQ9Y2K7 1162 aa14.69□□□□□ -0.06
SMCO2-206ENST00000543991 TAOK2Q9UL54 1235 aa14.68□□□□□ -0.06
SMCO2-206ENST00000543991 RIOK3O14730 519 aaKnown RBP14.66□□□□□ -0.06
SMCO2-206ENST00000543991 PITPNM1O00562 1244 aa14.65□□□□□ -0.06
SMCO2-206ENST00000543991 DNAJC5Q9H3Z4 198 aa14.64□□□□□ -0.07
SMCO2-206ENST00000543991 TSHZ2Q9NRE2 1034 aa14.63□□□□□ -0.07
SMCO2-206ENST00000543991 CHRM1P11229 460 aaPredicted RBP14.62□□□□□ -0.07
SMCO2-206ENST00000543991 RASEFQ8IZ41 740 aa14.62□□□□□ -0.07
SMCO2-206ENST00000543991 VGFO15240 615 aaPredicted RBP14.55□□□□□ -0.08
SMCO2-206ENST00000543991 STK25O00506 426 aa14.5□□□□□ -0.09
SMCO2-206ENST00000543991 NKX1-1Q15270 411 aaPredicted RBP14.49□□□□□ -0.09
SMCO2-206ENST00000543991 SGIP1Q9BQI5 828 aa14.49□□□□□ -0.09
SMCO2-206ENST00000543991 PYGBP11216 843 aa14.47□□□□□ -0.09
SMCO2-206ENST00000543991 GTPBP6O43824 516 aaPredicted RBP14.43□□□□□ -0.1
SMCO2-206ENST00000543991 CHADLQ6NUI6 762 aa14.42□□□□□ -0.1
SMCO2-206ENST00000543991 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.41□□□□□ -0.1
SMCO2-206ENST00000543991 ZFP91Q96JP5 570 aaPredicted RBP14.41□□□□□ -0.1
SMCO2-206ENST00000543991 BCL11BQ9C0K0 894 aaPredicted RBP14.4□□□□□ -0.1
SMCO2-206ENST00000543991 STK24Q9Y6E0 443 aa14.39□□□□□ -0.11
SMCO2-206ENST00000543991 FARP1Q9Y4F1 1045 aaPredicted RBP14.38□□□□□ -0.11
SMCO2-206ENST00000543991 TSPYL2Q9H2G4 693 aaPredicted RBP14.35□□□□□ -0.11
SMCO2-206ENST00000543991 RYDENQ9NUL5 291 aaKnown RBP14.34□□□□□ -0.11
SMCO2-206ENST00000543991 PRKCSHP14314 528 aaPredicted RBP14.32□□□□□ -0.12
SMCO2-206ENST00000543991 ZNF467Q7Z7K2 595 aaPredicted RBP14.31□□□□□ -0.12
SMCO2-206ENST00000543991 PRKAR2AP13861 404 aaKnown RBP14.29□□□□□ -0.12
SMCO2-206ENST00000543991 FXR2P51116 673 aaKnown RBP eCLIP14.26□□□□□ -0.13
SMCO2-206ENST00000543991 PDAP1Q13442 181 aaKnown RBP14.23□□□□□ -0.13
SMCO2-206ENST00000543991 CCDC61Q9Y6R9 512 aa14.23□□□□□ -0.13
SMCO2-206ENST00000543991 TPRNQ4KMQ1 711 aa14.22□□□□□ -0.13
SMCO2-206ENST00000543991 NBR1Q14596 966 aa14.21□□□□□ -0.13
SMCO2-206ENST00000543991 PCDHB8Q9UN66 801 aa14.2□□□□□ -0.14
SMCO2-206ENST00000543991 PCDHB13Q9Y5F0 798 aa14.2□□□□□ -0.14
SMCO2-206ENST00000543991 ZNF579Q8NAF0 562 aaKnown RBP14.18□□□□□ -0.14
SMCO2-206ENST00000543991 PAK3O75914 559 aaPredicted RBP14.15□□□□□ -0.14
SMCO2-206ENST00000543991 PSEN1P49768 467 aa14.14□□□□□ -0.15
SMCO2-206ENST00000543991 CHRDL2Q6WN34 429 aa14.12□□□□□ -0.15
SMCO2-206ENST00000543991 PIP4P2Q8N4L2 257 aa14.1□□□□□ -0.15
SMCO2-206ENST00000543991 IFNL1Q8IU54 200 aa14.06□□□□□ -0.16
SMCO2-206ENST00000543991 KIF12Q96FN5 646 aa14.05□□□□□ -0.16
SMCO2-206ENST00000543991 MAP3K13O43283 966 aa14.04□□□□□ -0.16
SMCO2-206ENST00000543991 MFRPQ9BY79 579 aa14.03□□□□□ -0.16
SMCO2-206ENST00000543991 CADPS2Q86UW7 1296 aa13.98□□□□□ -0.17
SMCO2-206ENST00000543991 P3H3Q8IVL6 736 aa13.98□□□□□ -0.17
SMCO2-206ENST00000543991 WDR70Q9NW82 654 aa13.96□□□□□ -0.17
SMCO2-206ENST00000543991 SOX12O15370 315 aa13.95□□□□□ -0.18
SMCO2-206ENST00000543991 EFCAB3Q8N7B9 438 aa13.95□□□□□ -0.18
SMCO2-206ENST00000543991 ZRANB1Q9UGI0 708 aa13.95□□□□□ -0.18
SMCO2-206ENST00000543991 NLRP6P59044 892 aa13.94□□□□□ -0.18
SMCO2-206ENST00000543991 CABP2Q9NPB3 220 aa13.94□□□□□ -0.18
SMCO2-206ENST00000543991 CD44P16070 742 aaKnown RBP13.92□□□□□ -0.18
SMCO2-206ENST00000543991 FBXO22Q8NEZ5 403 aa13.92□□□□□ -0.18
SMCO2-206ENST00000543991 PPP1R37O75864 691 aa13.88□□□□□ -0.19
SMCO2-206ENST00000543991 PHF8Q9UPP1 1060 aa13.88□□□□□ -0.19
SMCO2-206ENST00000543991 PHF12Q96QT6 1004 aa13.87□□□□□ -0.19
SMCO2-206ENST00000543991 KCNV2Q8TDN2 545 aa13.85□□□□□ -0.19
SMCO2-206ENST00000543991 GOLGA2Q08379 1002 aa13.77□□□□□ -0.21
SMCO2-206ENST00000543991 TMEM106CQ9BVX2 250 aa13.77□□□□□ -0.21
SMCO2-206ENST00000543991 C19orf67A6NJJ6 358 aa13.74□□□□□ -0.21
SMCO2-206ENST00000543991 MS4A4AQ96JQ5 239 aa13.74□□□□□ -0.21
SMCO2-206ENST00000543991 ARHGEF1Q92888 912 aaKnown RBP13.73□□□□□ -0.21
SMCO2-206ENST00000543991 MS4A3Q96HJ5 214 aa13.73□□□□□ -0.21
SMCO2-206ENST00000543991 E2F4Q16254 413 aa13.72□□□□□ -0.21
SMCO2-206ENST00000543991 TRPC6Q9Y210 931 aa13.7□□□□□ -0.22
SMCO2-206ENST00000543991 MKRN3Q13064 507 aaKnown RBP13.69□□□□□ -0.22
SMCO2-206ENST00000543991 PDE4AP27815 886 aa13.68□□□□□ -0.22
SMCO2-206ENST00000543991 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.68□□□□□ -0.22
SMCO2-206ENST00000543991 NCKAP5LQ9HCH0 1330 aa13.67□□□□□ -0.22
SMCO2-206ENST00000543991 TIE1P35590 1138 aa13.65□□□□□ -0.22
SMCO2-206ENST00000543991 LMOD2Q6P5Q4 547 aa13.65□□□□□ -0.22
SMCO2-206ENST00000543991 LARP6Q9BRS8 491 aaKnown RBP13.65□□□□□ -0.22
SMCO2-206ENST00000543991 TULP1O00294 542 aaPredicted RBP13.64□□□□□ -0.23
SMCO2-206ENST00000543991 MFSD10Q14728 455 aa13.63□□□□□ -0.23
SMCO2-206ENST00000543991 CRISPLD2Q9H0B8 497 aa13.62□□□□□ -0.23
SMCO2-206ENST00000543991 TTLL13PA6NNM8 815 aa13.6□□□□□ -0.23
SMCO2-206ENST00000543991 ILDR1Q86SU0 546 aaPredicted RBP13.58□□□□□ -0.24
SMCO2-206ENST00000543991 DDX27Q96GQ7 796 aaKnown RBP13.58□□□□□ -0.24
SMCO2-206ENST00000543991 BMP2KQ9NSY1 1161 aaPredicted RBP13.56□□□□□ -0.24
SMCO2-206ENST00000543991 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.56□□□□□ -0.24
SMCO2-206ENST00000543991 TESPA1A2RU30 521 aaPredicted RBP13.55□□□□□ -0.24
SMCO2-206ENST00000543991 SEMA3EO15041 775 aa13.54□□□□□ -0.24
SMCO2-206ENST00000543991 ARIH1Q9Y4X5 557 aaPredicted RBP13.54□□□□□ -0.24
SMCO2-206ENST00000543991 CAMK2BQ13554 666 aa13.51□□□□□ -0.25
SMCO2-206ENST00000543991 TRIM35Q9UPQ4 493 aa13.51□□□□□ -0.25
SMCO2-206ENST00000543991 GALR2O43603 387 aaPredicted RBP13.5□□□□□ -0.25
SMCO2-206ENST00000543991 CLCN6P51797 869 aa13.5□□□□□ -0.25
SMCO2-206ENST00000543991 SMYD5Q6GMV2 418 aa13.46□□□□□ -0.25
SMCO2-206ENST00000543991 GPHNQ9NQX3 736 aaPredicted RBP13.46□□□□□ -0.25
SMCO2-206ENST00000543991 HAX1O00165 279 aa13.45□□□□□ -0.26
SMCO2-206ENST00000543991 ZC3H15Q8WU90 426 aaKnown RBP13.45□□□□□ -0.26
SMCO2-206ENST00000543991 PPP1R15BQ5SWA1 713 aa13.44□□□□□ -0.26
SMCO2-206ENST00000543991 DPY19L2Q6NUT2 758 aa13.42□□□□□ -0.26
SMCO2-206ENST00000543991 MICALL2Q8IY33 904 aa13.39□□□□□ -0.27
SMCO2-206ENST00000543991 ATN1P54259 1190 aaPredicted RBP13.38□□□□□ -0.27
SMCO2-206ENST00000543991 EVX2Q03828 476 aa13.38□□□□□ -0.27
SMCO2-206ENST00000543991 PDCD7Q8N8D1 485 aaKnown RBP13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms