RNA–Protein interactions for RNA: ENST00000543323.5

MDM2-230, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 427 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-230ENST00000543323 RNF25Q96BH1 459 aaPredicted RBP11.95□□□□□ -0.5
MDM2-230ENST00000543323 RBM42Q9BTD8 480 aaKnown RBP11.94□□□□□ -0.5
MDM2-230ENST00000543323 NUBP1P53384 320 aa11.88□□□□□ -0.51
MDM2-230ENST00000543323 NKX1-1Q15270 411 aaPredicted RBP11.87□□□□□ -0.51
MDM2-230ENST00000543323 AKT1S1Q96B36 256 aa11.87□□□□□ -0.51
MDM2-230ENST00000543323 RIOK3O14730 519 aaKnown RBP11.86□□□□□ -0.51
MDM2-230ENST00000543323 GTPBP6O43824 516 aaPredicted RBP11.84□□□□□ -0.51
MDM2-230ENST00000543323 DCAF8Q5TAQ9 597 aa11.82□□□□□ -0.52
MDM2-230ENST00000543323 SPDYE1Q8NFV5 336 aaPredicted RBP11.8□□□□□ -0.52
MDM2-230ENST00000543323 VGFO15240 615 aaPredicted RBP11.78□□□□□ -0.52
MDM2-230ENST00000543323 STK25O00506 426 aa11.77□□□□□ -0.53
MDM2-230ENST00000543323 FAM212AQ96EL1 285 aa11.76□□□□□ -0.53
MDM2-230ENST00000543323 REM2Q8IYK8 340 aaPredicted RBP11.75□□□□□ -0.53
MDM2-230ENST00000543323 CHRM1P11229 460 aaPredicted RBP11.73□□□□□ -0.53
MDM2-230ENST00000543323 SGIP1Q9BQI5 828 aa11.73□□□□□ -0.53
MDM2-230ENST00000543323 RYDENQ9NUL5 291 aaKnown RBP11.7□□□□□ -0.54
MDM2-230ENST00000543323 CREBZFQ9NS37 354 aa11.69□□□□□ -0.54
MDM2-230ENST00000543323 MNX1P50219 401 aaPredicted RBP11.68□□□□□ -0.54
MDM2-230ENST00000543323 BCL11BQ9C0K0 894 aaPredicted RBP11.66□□□□□ -0.54
MDM2-230ENST00000543323 STK24Q9Y6E0 443 aa11.66□□□□□ -0.54
MDM2-230ENST00000543323 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.65□□□□□ -0.54
MDM2-230ENST00000543323 ZFP91Q96JP5 570 aaPredicted RBP11.65□□□□□ -0.54
MDM2-230ENST00000543323 CLEC11AQ9Y240 323 aa11.65□□□□□ -0.54
MDM2-230ENST00000543323 PRR29P0C7W0 189 aa11.63□□□□□ -0.55
MDM2-230ENST00000543323 RASEFQ8IZ41 740 aa11.63□□□□□ -0.55
MDM2-230ENST00000543323 PITPNM1O00562 1244 aa11.62□□□□□ -0.55
MDM2-230ENST00000543323 TIMELESSQ9UNS1 1208 aa11.61□□□□□ -0.55
MDM2-230ENST00000543323 GTF3C3Q9Y5Q9 886 aa11.61□□□□□ -0.55
MDM2-230ENST00000543323 P3H3Q8IVL6 736 aa11.6□□□□□ -0.55
MDM2-230ENST00000543323 TULP1O00294 542 aaPredicted RBP11.59□□□□□ -0.55
MDM2-230ENST00000543323 PYGBP11216 843 aa11.56□□□□□ -0.56
MDM2-230ENST00000543323 TMEM132AQ24JP5 1023 aa11.53□□□□□ -0.56
MDM2-230ENST00000543323 ERICH6Q7L0X2 663 aa11.52□□□□□ -0.57
MDM2-230ENST00000543323 WDR70Q9NW82 654 aa11.48□□□□□ -0.57
MDM2-230ENST00000543323 KCNV2Q8TDN2 545 aa11.47□□□□□ -0.57
MDM2-230ENST00000543323 ZNF467Q7Z7K2 595 aaPredicted RBP11.44□□□□□ -0.58
MDM2-230ENST00000543323 CADPS2Q86UW7 1296 aa11.44□□□□□ -0.58
MDM2-230ENST00000543323 LMOD2Q6P5Q4 547 aa11.43□□□□□ -0.58
MDM2-230ENST00000543323 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.43□□□□□ -0.58
MDM2-230ENST00000543323 PDAP1Q13442 181 aaKnown RBP11.39□□□□□ -0.59
MDM2-230ENST00000543323 CHADLQ6NUI6 762 aa11.35□□□□□ -0.59
MDM2-230ENST00000543323 TSPYL2Q9H2G4 693 aaPredicted RBP11.34□□□□□ -0.59
MDM2-230ENST00000543323 FARP1Q9Y4F1 1045 aaPredicted RBP11.34□□□□□ -0.59
MDM2-230ENST00000543323 FXR2P51116 673 aaKnown RBP eCLIP11.33□□□□□ -0.6
MDM2-230ENST00000543323 MFRPQ9BY79 579 aa11.33□□□□□ -0.6
MDM2-230ENST00000543323 ARXQ96QS3 562 aa11.31□□□□□ -0.6
MDM2-230ENST00000543323 PCDHB8Q9UN66 801 aa11.31□□□□□ -0.6
MDM2-230ENST00000543323 PCDHB13Q9Y5F0 798 aa11.31□□□□□ -0.6
MDM2-230ENST00000543323 PRKAR2AP13861 404 aaKnown RBP11.3□□□□□ -0.6
MDM2-230ENST00000543323 ARHGEF1Q92888 912 aaKnown RBP11.3□□□□□ -0.6
MDM2-230ENST00000543323 PSEN1P49768 467 aa11.29□□□□□ -0.6
MDM2-230ENST00000543323 C14orf37Q86TY3 774 aa11.28□□□□□ -0.6
MDM2-230ENST00000543323 BRPF1P55201 1214 aaPredicted RBP11.27□□□□□ -0.61
MDM2-230ENST00000543323 CHRDL2Q6WN34 429 aa11.27□□□□□ -0.61
MDM2-230ENST00000543323 ZNF579Q8NAF0 562 aaKnown RBP11.27□□□□□ -0.61
MDM2-230ENST00000543323 ZC3H15Q8WU90 426 aaKnown RBP11.25□□□□□ -0.61
MDM2-230ENST00000543323 E2F4Q16254 413 aa11.24□□□□□ -0.61
MDM2-230ENST00000543323 CCDC61Q9Y6R9 512 aa11.24□□□□□ -0.61
MDM2-230ENST00000543323 PPP1R37O75864 691 aa11.22□□□□□ -0.61
MDM2-230ENST00000543323 PIP4P2Q8N4L2 257 aa11.22□□□□□ -0.61
MDM2-230ENST00000543323 TESPA1A2RU30 521 aaPredicted RBP11.21□□□□□ -0.61
MDM2-230ENST00000543323 NLRP6P59044 892 aa11.21□□□□□ -0.61
MDM2-230ENST00000543323 FBXO22Q8NEZ5 403 aa11.21□□□□□ -0.61
MDM2-230ENST00000543323 SEMA3EO15041 775 aa11.18□□□□□ -0.62
MDM2-230ENST00000543323 SOX12O15370 315 aa11.18□□□□□ -0.62
MDM2-230ENST00000543323 EFCAB3Q8N7B9 438 aa11.18□□□□□ -0.62
MDM2-230ENST00000543323 NEUROD2Q15784 382 aa11.17□□□□□ -0.62
MDM2-230ENST00000543323 SLC24A3Q9HC58 644 aa11.16□□□□□ -0.62
MDM2-230ENST00000543323 PHF8Q9UPP1 1060 aa11.15□□□□□ -0.62
MDM2-230ENST00000543323 IFNL1Q8IU54 200 aa11.14□□□□□ -0.63
MDM2-230ENST00000543323 CABP2Q9NPB3 220 aa11.14□□□□□ -0.63
MDM2-230ENST00000543323 SMYD5Q6GMV2 418 aa11.11□□□□□ -0.63
MDM2-230ENST00000543323 NCKAP5LQ9HCH0 1330 aa11.1□□□□□ -0.63
MDM2-230ENST00000543323 PAK3O75914 559 aaPredicted RBP11.1□□□□□ -0.63
MDM2-230ENST00000543323 HOMEZQ8IX15 550 aa11.1□□□□□ -0.63
MDM2-230ENST00000543323 ZMYND10O75800 440 aa11.09□□□□□ -0.63
MDM2-230ENST00000543323 MAP3K13O43283 966 aa11.08□□□□□ -0.64
MDM2-230ENST00000543323 PDE4AP27815 886 aa11.08□□□□□ -0.64
MDM2-230ENST00000543323 MFSD10Q14728 455 aa11.08□□□□□ -0.64
MDM2-230ENST00000543323 KIF12Q96FN5 646 aa11.07□□□□□ -0.64
MDM2-230ENST00000543323 LARP6Q9BRS8 491 aaKnown RBP11.07□□□□□ -0.64
MDM2-230ENST00000543323 ARIH1Q9Y4X5 557 aaPredicted RBP11.07□□□□□ -0.64
MDM2-230ENST00000543323 DAXXQ9UER7 740 aaPredicted RBP11.05□□□□□ -0.64
MDM2-230ENST00000543323 CRISPLD2Q9H0B8 497 aa11.04□□□□□ -0.64
MDM2-230ENST00000543323 BARGINQ6ZT62 677 aa11.02□□□□□ -0.65
MDM2-230ENST00000543323 DDX27Q96GQ7 796 aaKnown RBP11.02□□□□□ -0.65
MDM2-230ENST00000543323 MS4A4AQ96JQ5 239 aa11.01□□□□□ -0.65
MDM2-230ENST00000543323 CD44P16070 742 aaKnown RBP11□□□□□ -0.65
MDM2-230ENST00000543323 CAMK2BQ13554 666 aa11□□□□□ -0.65
MDM2-230ENST00000543323 ZRANB1Q9UGI0 708 aa10.98□□□□□ -0.65
MDM2-230ENST00000543323 AK7Q96M32 723 aa10.95□□□□□ -0.66
MDM2-230ENST00000543323 SUPT5HO00267 1087 aaKnown RBP10.94□□□□□ -0.66
MDM2-230ENST00000543323 PHF12Q96QT6 1004 aa10.94□□□□□ -0.66
MDM2-230ENST00000543323 C19orf67A6NJJ6 358 aa10.93□□□□□ -0.66
MDM2-230ENST00000543323 GOLGA2Q08379 1002 aa10.92□□□□□ -0.66
MDM2-230ENST00000543323 GPIHBP1Q8IV16 184 aa10.92□□□□□ -0.66
MDM2-230ENST00000543323 RBM26Q5T8P6 1007 aaKnown RBP10.9□□□□□ -0.66
MDM2-230ENST00000543323 MLLT3P42568 568 aaPredicted RBP10.89□□□□□ -0.67
MDM2-230ENST00000543323 KRI1Q8N9T8 703 aaKnown RBP10.88□□□□□ -0.67
MDM2-230ENST00000543323 GPBP1L1Q9HC44 474 aaPredicted RBP10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms