RNA–Protein interactions for RNA: ENST00000542936.1

PACRG-207, Transcript of parkin coregulated, humanhuman

TSL 3

Gene PACRG, Length 415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACRG-207ENST00000542936 TSPYL2Q9H2G4 693 aaPredicted RBP13.36□□□□□ -0.27
PACRG-207ENST00000542936 VASPP50552 380 aaPredicted RBP13.31□□□□□ -0.28
PACRG-207ENST00000542936 ZBTB47Q9UFB7 747 aaPredicted RBP13.29□□□□□ -0.28
PACRG-207ENST00000542936 MS4A3Q96HJ5 214 aa13.27□□□□□ -0.29
PACRG-207ENST00000542936 CCDC61Q9Y6R9 512 aa13.27□□□□□ -0.29
PACRG-207ENST00000542936 RASEFQ8IZ41 740 aa13.26□□□□□ -0.29
PACRG-207ENST00000542936 KLHL34Q8N239 644 aa13.24□□□□□ -0.29
PACRG-207ENST00000542936 NUBP1P53384 320 aa13.19□□□□□ -0.3
PACRG-207ENST00000542936 KIF12Q96FN5 646 aa13.19□□□□□ -0.3
PACRG-207ENST00000542936 ASTLQ6HA08 431 aaPredicted RBP13.17□□□□□ -0.3
PACRG-207ENST00000542936 PELP1Q8IZL8 1130 aaKnown RBP13.17□□□□□ -0.3
PACRG-207ENST00000542936 ATMINO43313 823 aaPredicted RBP13.15□□□□□ -0.3
PACRG-207ENST00000542936 MAP3K13O43283 966 aa13.12□□□□□ -0.31
PACRG-207ENST00000542936 FAM212AQ96EL1 285 aa13.12□□□□□ -0.31
PACRG-207ENST00000542936 IFNLR1Q8IU57 520 aaPredicted RBP13.11□□□□□ -0.31
PACRG-207ENST00000542936 DCAF8Q5TAQ9 597 aa13.1□□□□□ -0.31
PACRG-207ENST00000542936 SLC39A7Q92504 469 aa13.09□□□□□ -0.31
PACRG-207ENST00000542936 METRNQ9UJH8 293 aa13.09□□□□□ -0.31
PACRG-207ENST00000542936 C7P10643 843 aa13.08□□□□□ -0.32
PACRG-207ENST00000542936 POTEB2H3BUK9 544 aa13.07□□□□□ -0.32
PACRG-207ENST00000542936 ATN1P54259 1190 aaPredicted RBP13.05□□□□□ -0.32
PACRG-207ENST00000542936 BMP2KQ9NSY1 1161 aaPredicted RBP13.04□□□□□ -0.32
PACRG-207ENST00000542936 TRPC6Q9Y210 931 aa13.04□□□□□ -0.32
PACRG-207ENST00000542936 OTUD5Q96G74 571 aa13.03□□□□□ -0.32
PACRG-207ENST00000542936 TIE1P35590 1138 aa13.02□□□□□ -0.33
PACRG-207ENST00000542936 SGIP1Q9BQI5 828 aa13.01□□□□□ -0.33
PACRG-207ENST00000542936 PCDHB13Q9Y5F0 798 aa13.01□□□□□ -0.33
PACRG-207ENST00000542936 SPOCK2Q92563 424 aa13□□□□□ -0.33
PACRG-207ENST00000542936 PYGBP11216 843 aa12.99□□□□□ -0.33
PACRG-207ENST00000542936 TTLL13PA6NNM8 815 aa12.95□□□□□ -0.34
PACRG-207ENST00000542936 CIZ1Q9ULV3 898 aaPredicted RBP12.95□□□□□ -0.34
PACRG-207ENST00000542936 GSE1Q14687 1217 aa12.94□□□□□ -0.34
PACRG-207ENST00000542936 IFNL1Q8IU54 200 aa12.92□□□□□ -0.34
PACRG-207ENST00000542936 MAMSTRQ6ZN01 415 aa12.9□□□□□ -0.34
PACRG-207ENST00000542936 POTEJP0CG39 1038 aa12.89□□□□□ -0.35
PACRG-207ENST00000542936 TRIM35Q9UPQ4 493 aa12.88□□□□□ -0.35
PACRG-207ENST00000542936 SEC24BO95487 1268 aa12.86□□□□□ -0.35
PACRG-207ENST00000542936 POTEFA5A3E0 1075 aa12.85□□□□□ -0.35
PACRG-207ENST00000542936 TMEM106CQ9BVX2 250 aa12.84□□□□□ -0.35
PACRG-207ENST00000542936 PCDHB8Q9UN66 801 aa12.84□□□□□ -0.35
PACRG-207ENST00000542936 SCUBE2Q9NQ36 999 aa12.83□□□□□ -0.36
PACRG-207ENST00000542936 IER5LQ5T953 404 aa12.82□□□□□ -0.36
PACRG-207ENST00000542936 COLQQ9Y215 455 aaPredicted RBP12.81□□□□□ -0.36
PACRG-207ENST00000542936 CHRM1P11229 460 aaPredicted RBP12.73□□□□□ -0.37
PACRG-207ENST00000542936 ZNF467Q7Z7K2 595 aaPredicted RBP12.73□□□□□ -0.37
PACRG-207ENST00000542936 PLCG2P16885 1265 aa12.7□□□□□ -0.38
PACRG-207ENST00000542936 POTEMA6NI47 508 aa12.67□□□□□ -0.38
PACRG-207ENST00000542936 IRX5P78411 483 aaPredicted RBP12.66□□□□□ -0.38
PACRG-207ENST00000542936 POTEGQ6S5H5 508 aa12.65□□□□□ -0.38
PACRG-207ENST00000542936 PSEN1P49768 467 aa12.64□□□□□ -0.39
PACRG-207ENST00000542936 TRIM41Q8WV44 630 aa12.63□□□□□ -0.39
PACRG-207ENST00000542936 OCEL1Q9H607 264 aa12.63□□□□□ -0.39
PACRG-207ENST00000542936 FAM163AQ96GL9 167 aaPredicted RBP12.62□□□□□ -0.39
PACRG-207ENST00000542936 PDAP1Q13442 181 aaKnown RBP12.6□□□□□ -0.39
PACRG-207ENST00000542936 GOLGA2Q08379 1002 aa12.58□□□□□ -0.4
PACRG-207ENST00000542936 SLAIN1Q8ND83 568 aa12.56□□□□□ -0.4
PACRG-207ENST00000542936 RNF25Q96BH1 459 aaPredicted RBP12.56□□□□□ -0.4
PACRG-207ENST00000542936 ECM2O94769 699 aaPredicted RBP12.55□□□□□ -0.4
PACRG-207ENST00000542936 MKRN3Q13064 507 aaKnown RBP12.55□□□□□ -0.4
PACRG-207ENST00000542936 LCE2DQ5TA82 110 aaPredicted RBP12.55□□□□□ -0.4
PACRG-207ENST00000542936 CABP2Q9NPB3 220 aa12.53□□□□□ -0.4
PACRG-207ENST00000542936 RIOK3O14730 519 aaKnown RBP12.52□□□□□ -0.41
PACRG-207ENST00000542936 PKD2Q13563 968 aa12.51□□□□□ -0.41
PACRG-207ENST00000542936 PDCD7Q8N8D1 485 aaKnown RBP12.48□□□□□ -0.41
PACRG-207ENST00000542936 PCDH10Q9P2E7 1040 aa12.48□□□□□ -0.41
PACRG-207ENST00000542936 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.47□□□□□ -0.41
PACRG-207ENST00000542936 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.47□□□□□ -0.41
PACRG-207ENST00000542936 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.46□□□□□ -0.41
PACRG-207ENST00000542936 ZFP91Q96JP5 570 aaPredicted RBP12.46□□□□□ -0.41
PACRG-207ENST00000542936 VGFO15240 615 aaPredicted RBP12.44□□□□□ -0.42
PACRG-207ENST00000542936 RGL2O15211 777 aa12.43□□□□□ -0.42
PACRG-207ENST00000542936 L3MBTL3Q96JM7 780 aaPredicted RBP12.43□□□□□ -0.42
PACRG-207ENST00000542936 C3orf67Q6ZVT6 689 aa12.4□□□□□ -0.42
PACRG-207ENST00000542936 EFCAB3Q8N7B9 438 aa12.4□□□□□ -0.42
PACRG-207ENST00000542936 ST18O60284 1047 aa12.38□□□□□ -0.43
PACRG-207ENST00000542936 ILDR1Q86SU0 546 aaPredicted RBP12.37□□□□□ -0.43
PACRG-207ENST00000542936 SNPHO15079 494 aa12.36□□□□□ -0.43
PACRG-207ENST00000542936 BCL11BQ9C0K0 894 aaPredicted RBP12.36□□□□□ -0.43
PACRG-207ENST00000542936 TAOK2Q9UL54 1235 aa12.35□□□□□ -0.43
PACRG-207ENST00000542936 STK24Q9Y6E0 443 aa12.35□□□□□ -0.43
PACRG-207ENST00000542936 DPY19L2Q6NUT2 758 aa12.34□□□□□ -0.43
PACRG-207ENST00000542936 STK25O00506 426 aa12.33□□□□□ -0.44
PACRG-207ENST00000542936 G3V3G9 751 aa12.3□□□□□ -0.44
PACRG-207ENST00000542936 TMEM121BQ9BXQ6 578 aaPredicted RBP12.29□□□□□ -0.44
PACRG-207ENST00000542936 CDAN1Q8IWY9 1227 aa12.28□□□□□ -0.44
PACRG-207ENST00000542936 BOLA1Q9Y3E2 137 aa12.28□□□□□ -0.44
PACRG-207ENST00000542936 PHF8Q9UPP1 1060 aa12.27□□□□□ -0.45
PACRG-207ENST00000542936 SOX12O15370 315 aa12.23□□□□□ -0.45
PACRG-207ENST00000542936 MS4A4AQ96JQ5 239 aa12.2□□□□□ -0.46
PACRG-207ENST00000542936 MARVELD3Q96A59 401 aa12.19□□□□□ -0.46
PACRG-207ENST00000542936 DCAF8L2P0C7V8 631 aa12.17□□□□□ -0.46
PACRG-207ENST00000542936 NLRP6P59044 892 aa12.17□□□□□ -0.46
PACRG-207ENST00000542936 CHGAP10645 457 aaKnown RBP12.16□□□□□ -0.46
PACRG-207ENST00000542936 MFRPQ9BY79 579 aa12.16□□□□□ -0.46
PACRG-207ENST00000542936 EMP3P54852 163 aa12.13□□□□□ -0.47
PACRG-207ENST00000542936 FBXO22Q8NEZ5 403 aa12.13□□□□□ -0.47
PACRG-207ENST00000542936 MICALL2Q8IY33 904 aa12.11□□□□□ -0.47
PACRG-207ENST00000542936 HS6ST3Q8IZP7 471 aa12.1□□□□□ -0.47
PACRG-207ENST00000542936 HOXB3P14651 431 aaPredicted RBP12.06□□□□□ -0.48
PACRG-207ENST00000542936 ZNF710Q8N1W2 664 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms