RNA–Protein interactions for RNA: ENST00000542813.2

SFSWAP-211, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-211ENST00000542813 FKBP8Q14318 412 aa8.94□□□□□ -0.98
SFSWAP-211ENST00000542813 MS4A3Q96HJ5 214 aa8.94□□□□□ -0.98
SFSWAP-211ENST00000542813 CCDC61Q9Y6R9 512 aa8.94□□□□□ -0.98
SFSWAP-211ENST00000542813 PLCD3Q8N3E9 789 aa8.92□□□□□ -0.98
SFSWAP-211ENST00000542813 ASTLQ6HA08 431 aaPredicted RBP8.9□□□□□ -0.98
SFSWAP-211ENST00000542813 POTEMA6NI47 508 aa8.89□□□□□ -0.99
SFSWAP-211ENST00000542813 OTUD5Q96G74 571 aa8.89□□□□□ -0.99
SFSWAP-211ENST00000542813 ZBTB47Q9UFB7 747 aaPredicted RBP8.89□□□□□ -0.99
SFSWAP-211ENST00000542813 RASEFQ8IZ41 740 aa8.88□□□□□ -0.99
SFSWAP-211ENST00000542813 PELP1Q8IZL8 1130 aaKnown RBP8.88□□□□□ -0.99
SFSWAP-211ENST00000542813 KIF12Q96FN5 646 aa8.88□□□□□ -0.99
SFSWAP-211ENST00000542813 ATMINO43313 823 aaPredicted RBP8.87□□□□□ -0.99
SFSWAP-211ENST00000542813 POTEB2H3BUK9 544 aa8.84□□□□□ -0.99
SFSWAP-211ENST00000542813 POTEGQ6S5H5 508 aa8.84□□□□□ -0.99
SFSWAP-211ENST00000542813 SLC39A7Q92504 469 aa8.84□□□□□ -0.99
SFSWAP-211ENST00000542813 C7P10643 843 aa8.83□□□□□ -1
SFSWAP-211ENST00000542813 METRNQ9UJH8 293 aa8.83□□□□□ -1
SFSWAP-211ENST00000542813 MAP3K13O43283 966 aa8.82□□□□□ -1
SFSWAP-211ENST00000542813 NUBP1P53384 320 aa8.81□□□□□ -1
SFSWAP-211ENST00000542813 ATN1P54259 1190 aaPredicted RBP8.8□□□□□ -1
SFSWAP-211ENST00000542813 FBXO3Q9UK99 471 aa8.79□□□□□ -1
SFSWAP-211ENST00000542813 TIE1P35590 1138 aa8.78□□□□□ -1
SFSWAP-211ENST00000542813 BMP2KQ9NSY1 1161 aaPredicted RBP8.78□□□□□ -1
SFSWAP-211ENST00000542813 FAM212AQ96EL1 285 aa8.77□□□□□ -1.01
SFSWAP-211ENST00000542813 SGIP1Q9BQI5 828 aa8.77□□□□□ -1.01
SFSWAP-211ENST00000542813 TRPC6Q9Y210 931 aa8.77□□□□□ -1.01
SFSWAP-211ENST00000542813 PCDHB13Q9Y5F0 798 aa8.75□□□□□ -1.01
SFSWAP-211ENST00000542813 TTLL13PA6NNM8 815 aa8.72□□□□□ -1.01
SFSWAP-211ENST00000542813 MAMSTRQ6ZN01 415 aa8.72□□□□□ -1.01
SFSWAP-211ENST00000542813 POTEJP0CG39 1038 aa8.71□□□□□ -1.02
SFSWAP-211ENST00000542813 POTEFA5A3E0 1075 aa8.68□□□□□ -1.02
SFSWAP-211ENST00000542813 IFNL1Q8IU54 200 aa8.68□□□□□ -1.02
SFSWAP-211ENST00000542813 DCAF8Q5TAQ9 597 aa8.67□□□□□ -1.02
SFSWAP-211ENST00000542813 SCUBE2Q9NQ36 999 aa8.67□□□□□ -1.02
SFSWAP-211ENST00000542813 TRIM35Q9UPQ4 493 aa8.67□□□□□ -1.02
SFSWAP-211ENST00000542813 VASPP50552 380 aaPredicted RBP8.66□□□□□ -1.02
SFSWAP-211ENST00000542813 IER5LQ5T953 404 aa8.66□□□□□ -1.02
SFSWAP-211ENST00000542813 SEC24BO95487 1268 aa8.65□□□□□ -1.02
SFSWAP-211ENST00000542813 PCDH10Q9P2E7 1040 aa8.65□□□□□ -1.02
SFSWAP-211ENST00000542813 KLHL34Q8N239 644 aa8.63□□□□□ -1.03
SFSWAP-211ENST00000542813 TMEM106CQ9BVX2 250 aa8.63□□□□□ -1.03
SFSWAP-211ENST00000542813 COLQQ9Y215 455 aaPredicted RBP8.63□□□□□ -1.03
SFSWAP-211ENST00000542813 PYGBP11216 843 aa8.62□□□□□ -1.03
SFSWAP-211ENST00000542813 LCE2DQ5TA82 110 aaPredicted RBP8.6□□□□□ -1.03
SFSWAP-211ENST00000542813 FAM163AQ96GL9 167 aaPredicted RBP8.6□□□□□ -1.03
SFSWAP-211ENST00000542813 GSE1Q14687 1217 aa8.59□□□□□ -1.03
SFSWAP-211ENST00000542813 PLCG2P16885 1265 aa8.55□□□□□ -1.04
SFSWAP-211ENST00000542813 PCDHB8Q9UN66 801 aa8.55□□□□□ -1.04
SFSWAP-211ENST00000542813 IRX5P78411 483 aaPredicted RBP8.53□□□□□ -1.04
SFSWAP-211ENST00000542813 PLCB2Q00722 1185 aa8.53□□□□□ -1.04
SFSWAP-211ENST00000542813 ZNF467Q7Z7K2 595 aaPredicted RBP8.53□□□□□ -1.04
SFSWAP-211ENST00000542813 CHRM1P11229 460 aaPredicted RBP8.52□□□□□ -1.05
SFSWAP-211ENST00000542813 OCEL1Q9H607 264 aa8.5□□□□□ -1.05
SFSWAP-211ENST00000542813 IFNLR1Q8IU57 520 aaPredicted RBP8.49□□□□□ -1.05
SFSWAP-211ENST00000542813 SPOCK2Q92563 424 aa8.49□□□□□ -1.05
SFSWAP-211ENST00000542813 SLAIN1Q8ND83 568 aa8.47□□□□□ -1.05
SFSWAP-211ENST00000542813 GOLGA2Q08379 1002 aa8.45□□□□□ -1.06
SFSWAP-211ENST00000542813 CIZ1Q9ULV3 898 aaPredicted RBP8.44□□□□□ -1.06
SFSWAP-211ENST00000542813 PSEN1P49768 467 aa8.43□□□□□ -1.06
SFSWAP-211ENST00000542813 MKRN3Q13064 507 aaKnown RBP8.43□□□□□ -1.06
SFSWAP-211ENST00000542813 CDAN1Q8IWY9 1227 aa8.42□□□□□ -1.06
SFSWAP-211ENST00000542813 HAP1P54257 671 aaPredicted RBP8.41□□□□□ -1.06
SFSWAP-211ENST00000542813 PDAP1Q13442 181 aaKnown RBP8.41□□□□□ -1.06
SFSWAP-211ENST00000542813 PDCD7Q8N8D1 485 aaKnown RBP8.4□□□□□ -1.06
SFSWAP-211ENST00000542813 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.4□□□□□ -1.06
SFSWAP-211ENST00000542813 BCANQ96GW7 911 aa8.38□□□□□ -1.07
SFSWAP-211ENST00000542813 L3MBTL3Q96JM7 780 aaPredicted RBP8.37□□□□□ -1.07
SFSWAP-211ENST00000542813 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.37□□□□□ -1.074e-6■■□□□ 12.9
SFSWAP-211ENST00000542813 ST18O60284 1047 aa8.36□□□□□ -1.07
SFSWAP-211ENST00000542813 TRIM41Q8WV44 630 aa8.36□□□□□ -1.07
SFSWAP-211ENST00000542813 C3orf67Q6ZVT6 689 aa8.35□□□□□ -1.07
SFSWAP-211ENST00000542813 SNPHO15079 494 aa8.34□□□□□ -1.07
SFSWAP-211ENST00000542813 DCAF8L2P0C7V8 631 aa8.34□□□□□ -1.07
SFSWAP-211ENST00000542813 ILDR1Q86SU0 546 aaPredicted RBP8.34□□□□□ -1.07
SFSWAP-211ENST00000542813 CABP2Q9NPB3 220 aa8.33□□□□□ -1.08
SFSWAP-211ENST00000542813 TMEM121BQ9BXQ6 578 aaPredicted RBP8.31□□□□□ -1.08
SFSWAP-211ENST00000542813 PRKCSHP14314 528 aaPredicted RBP8.3□□□□□ -1.08
SFSWAP-211ENST00000542813 VSIG10Q8N0Z9 540 aa8.28□□□□□ -1.08
SFSWAP-211ENST00000542813 TAOK2Q9UL54 1235 aa8.28□□□□□ -1.08
SFSWAP-211ENST00000542813 DPY19L2Q6NUT2 758 aa8.27□□□□□ -1.09
SFSWAP-211ENST00000542813 G3V3G9 751 aa8.26□□□□□ -1.09
SFSWAP-211ENST00000542813 MMRN1Q13201 1228 aa8.26□□□□□ -1.09
SFSWAP-211ENST00000542813 BOLA1Q9Y3E2 137 aa8.25□□□□□ -1.09
SFSWAP-211ENST00000542813 RIOK3O14730 519 aaKnown RBP8.23□□□□□ -1.09
SFSWAP-211ENST00000542813 SPNS2Q8IVW8 549 aa8.23□□□□□ -1.09
SFSWAP-211ENST00000542813 EFCAB3Q8N7B9 438 aa8.23□□□□□ -1.09
SFSWAP-211ENST00000542813 PKD2Q13563 968 aa8.22□□□□□ -1.09
SFSWAP-211ENST00000542813 MARVELD3Q96A59 401 aa8.21□□□□□ -1.1
SFSWAP-211ENST00000542813 RNF25Q96BH1 459 aaPredicted RBP8.2□□□□□ -1.1
SFSWAP-211ENST00000542813 VGFO15240 615 aaPredicted RBP8.19□□□□□ -1.1
SFSWAP-211ENST00000542813 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.18□□□□□ -1.1
SFSWAP-211ENST00000542813 EMP3P54852 163 aa8.18□□□□□ -1.1
SFSWAP-211ENST00000542813 ZFP91Q96JP5 570 aaPredicted RBP8.18□□□□□ -1.1
SFSWAP-211ENST00000542813 SOX12O15370 315 aa8.17□□□□□ -1.1
SFSWAP-211ENST00000542813 TPRNQ4KMQ1 711 aa8.16□□□□□ -1.1
SFSWAP-211ENST00000542813 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.15□□□□□ -1.1
SFSWAP-211ENST00000542813 HOXB3P14651 431 aaPredicted RBP8.13□□□□□ -1.11
SFSWAP-211ENST00000542813 MICALL2Q8IY33 904 aa8.13□□□□□ -1.11
SFSWAP-211ENST00000542813 BBXQ8WY36 941 aaPredicted RBP8.13□□□□□ -1.11
SFSWAP-211ENST00000542813 KDM2AQ9Y2K7 1162 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms