RNA–Protein interactions for RNA: ENST00000542765.4

LDHB-209, Transcript of lactate dehydrogenase B, humanhuman

TSL 2

Gene LDHB, Length 672 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHB-209ENST00000542765 POTEIP0CG38 1075 aa10.56□□□□□ -0.72
LDHB-209ENST00000542765 GALR2O43603 387 aaPredicted RBP10.55□□□□□ -0.72
LDHB-209ENST00000542765 IFNLR1Q8IU57 520 aaPredicted RBP10.55□□□□□ -0.72
LDHB-209ENST00000542765 KIF12Q96FN5 646 aa10.52□□□□□ -0.73
LDHB-209ENST00000542765 MS4A3Q96HJ5 214 aa10.48□□□□□ -0.73
LDHB-209ENST00000542765 KLHL34Q8N239 644 aa10.47□□□□□ -0.73
LDHB-209ENST00000542765 FAM212AQ96EL1 285 aa10.46□□□□□ -0.73
LDHB-209ENST00000542765 MAP3K13O43283 966 aa10.45□□□□□ -0.74
LDHB-209ENST00000542765 SGIP1Q9BQI5 828 aa10.43□□□□□ -0.74
LDHB-209ENST00000542765 SPOCK2Q92563 424 aa10.41□□□□□ -0.74
LDHB-209ENST00000542765 DCBLD2Q96PD2 775 aa10.41□□□□□ -0.74
LDHB-209ENST00000542765 DCAF8Q5TAQ9 597 aa10.4□□□□□ -0.74
LDHB-209ENST00000542765 ASTLQ6HA08 431 aaPredicted RBP10.39□□□□□ -0.75
LDHB-209ENST00000542765 TRPC6Q9Y210 931 aa10.38□□□□□ -0.75
LDHB-209ENST00000542765 GSE1Q14687 1217 aa10.37□□□□□ -0.75
LDHB-209ENST00000542765 ATMINO43313 823 aaPredicted RBP10.36□□□□□ -0.75
LDHB-209ENST00000542765 CHRM1P11229 460 aaPredicted RBP10.36□□□□□ -0.75
LDHB-209ENST00000542765 PELP1Q8IZL8 1130 aaKnown RBP10.36□□□□□ -0.75
LDHB-209ENST00000542765 IFNL1Q8IU54 200 aa10.34□□□□□ -0.75
LDHB-209ENST00000542765 PCDHB13Q9Y5F0 798 aa10.34□□□□□ -0.75
LDHB-209ENST00000542765 PYGBP11216 843 aa10.33□□□□□ -0.76
LDHB-209ENST00000542765 TIE1P35590 1138 aa10.33□□□□□ -0.76
LDHB-209ENST00000542765 BMP2KQ9NSY1 1161 aaPredicted RBP10.33□□□□□ -0.76
LDHB-209ENST00000542765 ATN1P54259 1190 aaPredicted RBP10.29□□□□□ -0.76
LDHB-209ENST00000542765 TTLL13PA6NNM8 815 aa10.27□□□□□ -0.77
LDHB-209ENST00000542765 LHX8Q68G74 356 aa10.26□□□□□ -0.77
LDHB-209ENST00000542765 CIZ1Q9ULV3 898 aaPredicted RBP10.24□□□□□ -0.77
LDHB-209ENST00000542765 PCDHB8Q9UN66 801 aa10.24□□□□□ -0.77
LDHB-209ENST00000542765 SLC39A7Q92504 469 aa10.23□□□□□ -0.77
LDHB-209ENST00000542765 POTEB2H3BUK9 544 aa10.22□□□□□ -0.77
LDHB-209ENST00000542765 C7P10643 843 aa10.22□□□□□ -0.77
LDHB-209ENST00000542765 POTEFA5A3E0 1075 aa10.2□□□□□ -0.78
LDHB-209ENST00000542765 ZNF467Q7Z7K2 595 aaPredicted RBP10.2□□□□□ -0.78
LDHB-209ENST00000542765 TRIM41Q8WV44 630 aa10.2□□□□□ -0.78
LDHB-209ENST00000542765 METRNQ9UJH8 293 aa10.2□□□□□ -0.78
LDHB-209ENST00000542765 TMEM106CQ9BVX2 250 aa10.18□□□□□ -0.78
LDHB-209ENST00000542765 TRIM35Q9UPQ4 493 aa10.18□□□□□ -0.78
LDHB-209ENST00000542765 IER5LQ5T953 404 aa10.15□□□□□ -0.78
LDHB-209ENST00000542765 POTEJP0CG39 1038 aa10.14□□□□□ -0.79
LDHB-209ENST00000542765 RNF25Q96BH1 459 aaPredicted RBP10.12□□□□□ -0.79
LDHB-209ENST00000542765 COLQQ9Y215 455 aaPredicted RBP10.12□□□□□ -0.79
LDHB-209ENST00000542765 PSEN1P49768 467 aa10.11□□□□□ -0.79
LDHB-209ENST00000542765 PDAP1Q13442 181 aaKnown RBP10.1□□□□□ -0.79
LDHB-209ENST00000542765 PKD2Q13563 968 aa10.1□□□□□ -0.79
LDHB-209ENST00000542765 IRX5P78411 483 aaPredicted RBP10.09□□□□□ -0.79
LDHB-209ENST00000542765 OTUD5Q96G74 571 aa10.09□□□□□ -0.79
LDHB-209ENST00000542765 RIOK3O14730 519 aaKnown RBP10.04□□□□□ -0.8
LDHB-209ENST00000542765 ILDR1Q86SU0 546 aaPredicted RBP10.04□□□□□ -0.8
LDHB-209ENST00000542765 SEC24BO95487 1268 aa10.01□□□□□ -0.81
LDHB-209ENST00000542765 OCEL1Q9H607 264 aa10.01□□□□□ -0.81
LDHB-209ENST00000542765 VGFO15240 615 aaPredicted RBP9.99□□□□□ -0.81
LDHB-209ENST00000542765 ECM2O94769 699 aaPredicted RBP9.99□□□□□ -0.81
LDHB-209ENST00000542765 PDCD7Q8N8D1 485 aaKnown RBP9.99□□□□□ -0.81
LDHB-209ENST00000542765 PLCG2P16885 1265 aa9.97□□□□□ -0.81
LDHB-209ENST00000542765 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.96□□□□□ -0.82
LDHB-209ENST00000542765 RGL2O15211 777 aa9.96□□□□□ -0.82
LDHB-209ENST00000542765 MAMSTRQ6ZN01 415 aa9.96□□□□□ -0.82
LDHB-209ENST00000542765 ZFP91Q96JP5 570 aaPredicted RBP9.96□□□□□ -0.82
LDHB-209ENST00000542765 CABP2Q9NPB3 220 aa9.96□□□□□ -0.82
LDHB-209ENST00000542765 MKRN3Q13064 507 aaKnown RBP9.95□□□□□ -0.82
LDHB-209ENST00000542765 GOLGA2Q08379 1002 aa9.92□□□□□ -0.82
LDHB-209ENST00000542765 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.92□□□□□ -0.82
LDHB-209ENST00000542765 EFCAB3Q8N7B9 438 aa9.91□□□□□ -0.82
LDHB-209ENST00000542765 SCUBE2Q9NQ36 999 aa9.9□□□□□ -0.82
LDHB-209ENST00000542765 TAOK2Q9UL54 1235 aa9.88□□□□□ -0.83
LDHB-209ENST00000542765 SOX12O15370 315 aa9.86□□□□□ -0.83
LDHB-209ENST00000542765 DPY19L2Q6NUT2 758 aa9.86□□□□□ -0.83
LDHB-209ENST00000542765 BCL11BQ9C0K0 894 aaPredicted RBP9.86□□□□□ -0.83
LDHB-209ENST00000542765 L3MBTL3Q96JM7 780 aaPredicted RBP9.83□□□□□ -0.84
LDHB-209ENST00000542765 MS4A4AQ96JQ5 239 aa9.83□□□□□ -0.84
LDHB-209ENST00000542765 TMEM121BQ9BXQ6 578 aaPredicted RBP9.82□□□□□ -0.84
LDHB-209ENST00000542765 STK25O00506 426 aa9.81□□□□□ -0.84
LDHB-209ENST00000542765 AMER1Q5JTC6 1135 aaPredicted RBP9.81□□□□□ -0.84
LDHB-209ENST00000542765 FBXO22Q8NEZ5 403 aa9.81□□□□□ -0.84
LDHB-209ENST00000542765 RTN4Q9NQC3 1192 aaKnown RBP9.81□□□□□ -0.84
LDHB-209ENST00000542765 STK24Q9Y6E0 443 aa9.81□□□□□ -0.84
LDHB-209ENST00000542765 PHF8Q9UPP1 1060 aa9.8□□□□□ -0.84
LDHB-209ENST00000542765 LCE2DQ5TA82 110 aaPredicted RBP9.78□□□□□ -0.84
LDHB-209ENST00000542765 MFRPQ9BY79 579 aa9.78□□□□□ -0.84
LDHB-209ENST00000542765 BOLA1Q9Y3E2 137 aa9.78□□□□□ -0.84
LDHB-209ENST00000542765 SLAIN1Q8ND83 568 aa9.77□□□□□ -0.85
LDHB-209ENST00000542765 HS6ST3Q8IZP7 471 aa9.76□□□□□ -0.85
LDHB-209ENST00000542765 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.76□□□□□ -0.85
LDHB-209ENST00000542765 DNAJC5Q9H3Z4 198 aa9.75□□□□□ -0.85
LDHB-209ENST00000542765 NLRP6P59044 892 aa9.74□□□□□ -0.85
LDHB-209ENST00000542765 C3orf67Q6ZVT6 689 aa9.71□□□□□ -0.86
LDHB-209ENST00000542765 MICALL2Q8IY33 904 aa9.71□□□□□ -0.86
LDHB-209ENST00000542765 CHGAP10645 457 aaKnown RBP9.67□□□□□ -0.86
LDHB-209ENST00000542765 TMEM92Q6UXU6 159 aa9.67□□□□□ -0.86
LDHB-209ENST00000542765 NKX1-1Q15270 411 aaPredicted RBP9.66□□□□□ -0.86
LDHB-209ENST00000542765 FAM163AQ96GL9 167 aaPredicted RBP9.66□□□□□ -0.86
LDHB-209ENST00000542765 G3V3G9 751 aa9.64□□□□□ -0.87
LDHB-209ENST00000542765 PPP1R37O75864 691 aa9.63□□□□□ -0.87
LDHB-209ENST00000542765 ST18O60284 1047 aa9.62□□□□□ -0.87
LDHB-209ENST00000542765 POTEMA6NI47 508 aa9.61□□□□□ -0.87
LDHB-209ENST00000542765 SNPHO15079 494 aa9.61□□□□□ -0.87
LDHB-209ENST00000542765 HOXB3P14651 431 aaPredicted RBP9.6□□□□□ -0.87
LDHB-209ENST00000542765 POTEGQ6S5H5 508 aa9.6□□□□□ -0.87
LDHB-209ENST00000542765 PLSCR2Q9NRY7 297 aa9.6□□□□□ -0.87
LDHB-209ENST00000542765 KIF3CO14782 793 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms