RNA–Protein interactions for RNA: ENST00000542727.1

KNTC1-213, Transcript of kinetochore associated 1, humanhuman

TSL 3

Gene KNTC1, Length 203 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-213ENST00000542727 TSPYL2Q9H2G4 693 aaPredicted RBP8.62□□□□□ -1.03
KNTC1-213ENST00000542727 CCDC61Q9Y6R9 512 aa8.61□□□□□ -1.03
KNTC1-213ENST00000542727 RASEFQ8IZ41 740 aa8.56□□□□□ -1.04
KNTC1-213ENST00000542727 MS4A3Q96HJ5 214 aa8.56□□□□□ -1.04
KNTC1-213ENST00000542727 ASTLQ6HA08 431 aaPredicted RBP8.54□□□□□ -1.04
KNTC1-213ENST00000542727 KIF12Q96FN5 646 aa8.54□□□□□ -1.04
KNTC1-213ENST00000542727 FAM212AQ96EL1 285 aa8.53□□□□□ -1.04
KNTC1-213ENST00000542727 NUBP1P53384 320 aa8.52□□□□□ -1.05
KNTC1-213ENST00000542727 SGIP1Q9BQI5 828 aa8.52□□□□□ -1.05
KNTC1-213ENST00000542727 ATMINO43313 823 aaPredicted RBP8.49□□□□□ -1.05
KNTC1-213ENST00000542727 SLC39A7Q92504 469 aa8.49□□□□□ -1.05
KNTC1-213ENST00000542727 MAP3K13O43283 966 aa8.48□□□□□ -1.05
KNTC1-213ENST00000542727 TIE1P35590 1138 aa8.48□□□□□ -1.05
KNTC1-213ENST00000542727 C7P10643 843 aa8.47□□□□□ -1.05
KNTC1-213ENST00000542727 VASPP50552 380 aaPredicted RBP8.47□□□□□ -1.05
KNTC1-213ENST00000542727 PELP1Q8IZL8 1130 aaKnown RBP8.44□□□□□ -1.06
KNTC1-213ENST00000542727 METRNQ9UJH8 293 aa8.44□□□□□ -1.06
KNTC1-213ENST00000542727 PCDHB13Q9Y5F0 798 aa8.43□□□□□ -1.06
KNTC1-213ENST00000542727 KLHL34Q8N239 644 aa8.42□□□□□ -1.06
KNTC1-213ENST00000542727 BMP2KQ9NSY1 1161 aaPredicted RBP8.42□□□□□ -1.06
KNTC1-213ENST00000542727 ATN1P54259 1190 aaPredicted RBP8.41□□□□□ -1.06
KNTC1-213ENST00000542727 GSE1Q14687 1217 aa8.4□□□□□ -1.06
KNTC1-213ENST00000542727 DCAF8Q5TAQ9 597 aa8.4□□□□□ -1.06
KNTC1-213ENST00000542727 TTLL13PA6NNM8 815 aa8.38□□□□□ -1.07
KNTC1-213ENST00000542727 MAMSTRQ6ZN01 415 aa8.37□□□□□ -1.07
KNTC1-213ENST00000542727 TRPC6Q9Y210 931 aa8.37□□□□□ -1.07
KNTC1-213ENST00000542727 POTEB2H3BUK9 544 aa8.36□□□□□ -1.07
KNTC1-213ENST00000542727 IER5LQ5T953 404 aa8.36□□□□□ -1.07
KNTC1-213ENST00000542727 IFNL1Q8IU54 200 aa8.36□□□□□ -1.07
KNTC1-213ENST00000542727 OTUD5Q96G74 571 aa8.35□□□□□ -1.07
KNTC1-213ENST00000542727 PYGBP11216 843 aa8.33□□□□□ -1.08
KNTC1-213ENST00000542727 TRIM35Q9UPQ4 493 aa8.33□□□□□ -1.08
KNTC1-213ENST00000542727 SEC24BO95487 1268 aa8.31□□□□□ -1.08
KNTC1-213ENST00000542727 CHRM1P11229 460 aaPredicted RBP8.31□□□□□ -1.08
KNTC1-213ENST00000542727 ZNF467Q7Z7K2 595 aaPredicted RBP8.31□□□□□ -1.08
KNTC1-213ENST00000542727 SPOCK2Q92563 424 aa8.31□□□□□ -1.08
KNTC1-213ENST00000542727 TMEM106CQ9BVX2 250 aa8.31□□□□□ -1.08
KNTC1-213ENST00000542727 SCUBE2Q9NQ36 999 aa8.3□□□□□ -1.08
KNTC1-213ENST00000542727 IFNLR1Q8IU57 520 aaPredicted RBP8.29□□□□□ -1.08
KNTC1-213ENST00000542727 POTEFA5A3E0 1075 aa8.27□□□□□ -1.09
KNTC1-213ENST00000542727 POTEJP0CG39 1038 aa8.25□□□□□ -1.09
KNTC1-213ENST00000542727 PLCG2P16885 1265 aa8.24□□□□□ -1.09
KNTC1-213ENST00000542727 PCDHB8Q9UN66 801 aa8.24□□□□□ -1.09
KNTC1-213ENST00000542727 COLQQ9Y215 455 aaPredicted RBP8.24□□□□□ -1.09
KNTC1-213ENST00000542727 TRIM41Q8WV44 630 aa8.23□□□□□ -1.09
KNTC1-213ENST00000542727 CIZ1Q9ULV3 898 aaPredicted RBP8.22□□□□□ -1.09
KNTC1-213ENST00000542727 IRX5P78411 483 aaPredicted RBP8.21□□□□□ -1.1
KNTC1-213ENST00000542727 GOLGA2Q08379 1002 aa8.19□□□□□ -1.1
KNTC1-213ENST00000542727 OCEL1Q9H607 264 aa8.19□□□□□ -1.1
KNTC1-213ENST00000542727 PDAP1Q13442 181 aaKnown RBP8.18□□□□□ -1.1
KNTC1-213ENST00000542727 PSEN1P49768 467 aa8.17□□□□□ -1.1
KNTC1-213ENST00000542727 MKRN3Q13064 507 aaKnown RBP8.16□□□□□ -1.1
KNTC1-213ENST00000542727 POTEMA6NI47 508 aa8.11□□□□□ -1.11
KNTC1-213ENST00000542727 L3MBTL3Q96JM7 780 aaPredicted RBP8.1□□□□□ -1.11
KNTC1-213ENST00000542727 POTEGQ6S5H5 508 aa8.09□□□□□ -1.11
KNTC1-213ENST00000542727 PDCD7Q8N8D1 485 aaKnown RBP8.09□□□□□ -1.11
KNTC1-213ENST00000542727 SLAIN1Q8ND83 568 aa8.09□□□□□ -1.11
KNTC1-213ENST00000542727 PCDH10Q9P2E7 1040 aa8.09□□□□□ -1.11
KNTC1-213ENST00000542727 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.08□□□□□ -1.12
KNTC1-213ENST00000542727 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.08□□□□□ -1.12
KNTC1-213ENST00000542727 ILDR1Q86SU0 546 aaPredicted RBP8.07□□□□□ -1.12
KNTC1-213ENST00000542727 FAM163AQ96GL9 167 aaPredicted RBP8.06□□□□□ -1.12
KNTC1-213ENST00000542727 CABP2Q9NPB3 220 aa8.06□□□□□ -1.12
KNTC1-213ENST00000542727 C3orf67Q6ZVT6 689 aa8.05□□□□□ -1.12
KNTC1-213ENST00000542727 RIOK3O14730 519 aaKnown RBP8.04□□□□□ -1.12
KNTC1-213ENST00000542727 SNPHO15079 494 aa8.04□□□□□ -1.12
KNTC1-213ENST00000542727 TAOK2Q9UL54 1235 aa8.04□□□□□ -1.12
KNTC1-213ENST00000542727 LCE2DQ5TA82 110 aaPredicted RBP8.03□□□□□ -1.12
KNTC1-213ENST00000542727 G3V3G9 751 aa8.01□□□□□ -1.13
KNTC1-213ENST00000542727 VGFO15240 615 aaPredicted RBP8.01□□□□□ -1.13
KNTC1-213ENST00000542727 TMEM121BQ9BXQ6 578 aaPredicted RBP7.99□□□□□ -1.13
KNTC1-213ENST00000542727 RNF25Q96BH1 459 aaPredicted RBP7.98□□□□□ -1.13
KNTC1-213ENST00000542727 BOLA1Q9Y3E2 137 aa7.97□□□□□ -1.13
KNTC1-213ENST00000542727 SOX12O15370 315 aa7.96□□□□□ -1.14
KNTC1-213ENST00000542727 ST18O60284 1047 aa7.96□□□□□ -1.14
KNTC1-213ENST00000542727 EFCAB3Q8N7B9 438 aa7.96□□□□□ -1.14
KNTC1-213ENST00000542727 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.95□□□□□ -1.14
KNTC1-213ENST00000542727 ZFP91Q96JP5 570 aaPredicted RBP7.95□□□□□ -1.14
KNTC1-213ENST00000542727 DPY19L2Q6NUT2 758 aa7.92□□□□□ -1.14
KNTC1-213ENST00000542727 ECM2O94769 699 aaPredicted RBP7.91□□□□□ -1.14
KNTC1-213ENST00000542727 NLRP6P59044 892 aa7.87□□□□□ -1.15
KNTC1-213ENST00000542727 CDAN1Q8IWY9 1227 aa7.87□□□□□ -1.15
KNTC1-213ENST00000542727 BCL11BQ9C0K0 894 aaPredicted RBP7.87□□□□□ -1.15
KNTC1-213ENST00000542727 PKD2Q13563 968 aa7.86□□□□□ -1.15
KNTC1-213ENST00000542727 MICALL2Q8IY33 904 aa7.86□□□□□ -1.15
KNTC1-213ENST00000542727 PHF8Q9UPP1 1060 aa7.85□□□□□ -1.15
KNTC1-213ENST00000542727 STK24Q9Y6E0 443 aa7.85□□□□□ -1.15
KNTC1-213ENST00000542727 STK25O00506 426 aa7.84□□□□□ -1.15
KNTC1-213ENST00000542727 DOK7Q18PE1 504 aa7.84□□□□□ -1.15
KNTC1-213ENST00000542727 MS4A4AQ96JQ5 239 aa7.84□□□□□ -1.15
KNTC1-213ENST00000542727 RIMBP2O15034 1052 aa7.82□□□□□ -1.16
KNTC1-213ENST00000542727 EMP3P54852 163 aa7.82□□□□□ -1.16
KNTC1-213ENST00000542727 ZNF710Q8N1W2 664 aa7.81□□□□□ -1.16
KNTC1-213ENST00000542727 FBXO22Q8NEZ5 403 aa7.81□□□□□ -1.16
KNTC1-213ENST00000542727 RGL2O15211 777 aa7.8□□□□□ -1.16
KNTC1-213ENST00000542727 MARVELD3Q96A59 401 aa7.8□□□□□ -1.16
KNTC1-213ENST00000542727 HOXB3P14651 431 aaPredicted RBP7.79□□□□□ -1.16
KNTC1-213ENST00000542727 ZSWIM6Q9HCJ5 1215 aa7.79□□□□□ -1.16
KNTC1-213ENST00000542727 MFRPQ9BY79 579 aa7.78□□□□□ -1.16
KNTC1-213ENST00000542727 HOXB1P14653 301 aaPredicted RBP7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms