RNA–Protein interactions for RNA: ENST00000541968.1

RAP1B-226, Transcript of RAP1B, member of RAS oncogene family, humanhuman

TSL 3

Gene RAP1B, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-226ENST00000541968 CCDC61Q9Y6R9 512 aa14.16□□□□□ -0.14
RAP1B-226ENST00000541968 CLCN6P51797 869 aa14.15□□□□□ -0.14
RAP1B-226ENST00000541968 FAM212AQ96EL1 285 aa14.14□□□□□ -0.15
RAP1B-226ENST00000541968 DCAF8Q5TAQ9 597 aa14.12□□□□□ -0.15
RAP1B-226ENST00000541968 GALR2O43603 387 aaPredicted RBP14.1□□□□□ -0.15
RAP1B-226ENST00000541968 SPOCK2Q92563 424 aa14.09□□□□□ -0.15
RAP1B-226ENST00000541968 KIF12Q96FN5 646 aa14.05□□□□□ -0.16
RAP1B-226ENST00000541968 MS4A3Q96HJ5 214 aa14.03□□□□□ -0.16
RAP1B-226ENST00000541968 MAP3K13O43283 966 aa14.01□□□□□ -0.17
RAP1B-226ENST00000541968 GSE1Q14687 1217 aa14□□□□□ -0.17
RAP1B-226ENST00000541968 DCBLD2Q96PD2 775 aa14□□□□□ -0.17
RAP1B-226ENST00000541968 PYGBP11216 843 aa13.97□□□□□ -0.17
RAP1B-226ENST00000541968 CIZ1Q9ULV3 898 aaPredicted RBP13.97□□□□□ -0.17
RAP1B-226ENST00000541968 POTEIP0CG38 1075 aa13.96□□□□□ -0.17
RAP1B-226ENST00000541968 PCDHB13Q9Y5F0 798 aa13.93□□□□□ -0.18
RAP1B-226ENST00000541968 SGIP1Q9BQI5 828 aa13.88□□□□□ -0.19
RAP1B-226ENST00000541968 TRPC6Q9Y210 931 aa13.87□□□□□ -0.19
RAP1B-226ENST00000541968 IFNL1Q8IU54 200 aa13.86□□□□□ -0.19
RAP1B-226ENST00000541968 CHRM1P11229 460 aaPredicted RBP13.81□□□□□ -0.2
RAP1B-226ENST00000541968 ATMINO43313 823 aaPredicted RBP13.8□□□□□ -0.2
RAP1B-226ENST00000541968 ASTLQ6HA08 431 aaPredicted RBP13.8□□□□□ -0.2
RAP1B-226ENST00000541968 BMP2KQ9NSY1 1161 aaPredicted RBP13.8□□□□□ -0.2
RAP1B-226ENST00000541968 PCDHB8Q9UN66 801 aa13.8□□□□□ -0.2
RAP1B-226ENST00000541968 TIE1P35590 1138 aa13.78□□□□□ -0.2
RAP1B-226ENST00000541968 PELP1Q8IZL8 1130 aaKnown RBP13.77□□□□□ -0.21
RAP1B-226ENST00000541968 ATN1P54259 1190 aaPredicted RBP13.76□□□□□ -0.21
RAP1B-226ENST00000541968 TTLL13PA6NNM8 815 aa13.74□□□□□ -0.21
RAP1B-226ENST00000541968 ZNF467Q7Z7K2 595 aaPredicted RBP13.74□□□□□ -0.21
RAP1B-226ENST00000541968 TRIM41Q8WV44 630 aa13.73□□□□□ -0.21
RAP1B-226ENST00000541968 TMEM106CQ9BVX2 250 aa13.72□□□□□ -0.21
RAP1B-226ENST00000541968 SLC39A7Q92504 469 aa13.66□□□□□ -0.22
RAP1B-226ENST00000541968 TRIM35Q9UPQ4 493 aa13.65□□□□□ -0.22
RAP1B-226ENST00000541968 METRNQ9UJH8 293 aa13.64□□□□□ -0.23
RAP1B-226ENST00000541968 C7P10643 843 aa13.63□□□□□ -0.23
RAP1B-226ENST00000541968 LHX8Q68G74 356 aa13.63□□□□□ -0.23
RAP1B-226ENST00000541968 PSEN1P49768 467 aa13.62□□□□□ -0.23
RAP1B-226ENST00000541968 ECM2O94769 699 aaPredicted RBP13.6□□□□□ -0.23
RAP1B-226ENST00000541968 PDAP1Q13442 181 aaKnown RBP13.6□□□□□ -0.23
RAP1B-226ENST00000541968 PKD2Q13563 968 aa13.6□□□□□ -0.23
RAP1B-226ENST00000541968 RNF25Q96BH1 459 aaPredicted RBP13.57□□□□□ -0.24
RAP1B-226ENST00000541968 RIOK3O14730 519 aaKnown RBP13.56□□□□□ -0.24
RAP1B-226ENST00000541968 SEC24BO95487 1268 aa13.53□□□□□ -0.24
RAP1B-226ENST00000541968 POTEB2H3BUK9 544 aa13.52□□□□□ -0.25
RAP1B-226ENST00000541968 IER5LQ5T953 404 aa13.52□□□□□ -0.25
RAP1B-226ENST00000541968 GOLGA2Q08379 1002 aa13.51□□□□□ -0.25
RAP1B-226ENST00000541968 POTEFA5A3E0 1075 aa13.5□□□□□ -0.25
RAP1B-226ENST00000541968 COLQQ9Y215 455 aaPredicted RBP13.5□□□□□ -0.25
RAP1B-226ENST00000541968 RGL2O15211 777 aa13.47□□□□□ -0.25
RAP1B-226ENST00000541968 VGFO15240 615 aaPredicted RBP13.47□□□□□ -0.25
RAP1B-226ENST00000541968 MKRN3Q13064 507 aaKnown RBP13.47□□□□□ -0.25
RAP1B-226ENST00000541968 CABP2Q9NPB3 220 aa13.47□□□□□ -0.25
RAP1B-226ENST00000541968 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.45□□□□□ -0.26
RAP1B-226ENST00000541968 ZFP91Q96JP5 570 aaPredicted RBP13.45□□□□□ -0.26
RAP1B-226ENST00000541968 PLCG2P16885 1265 aa13.44□□□□□ -0.26
RAP1B-226ENST00000541968 IRX5P78411 483 aaPredicted RBP13.43□□□□□ -0.26
RAP1B-226ENST00000541968 TAOK2Q9UL54 1235 aa13.41□□□□□ -0.26
RAP1B-226ENST00000541968 POTEJP0CG39 1038 aa13.4□□□□□ -0.26
RAP1B-226ENST00000541968 OCEL1Q9H607 264 aa13.4□□□□□ -0.26
RAP1B-226ENST00000541968 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.37□□□□□ -0.27
RAP1B-226ENST00000541968 EFCAB3Q8N7B9 438 aa13.36□□□□□ -0.27
RAP1B-226ENST00000541968 OTUD5Q96G74 571 aa13.36□□□□□ -0.27
RAP1B-226ENST00000541968 BCL11BQ9C0K0 894 aaPredicted RBP13.35□□□□□ -0.27
RAP1B-226ENST00000541968 STK25O00506 426 aa13.33□□□□□ -0.28
RAP1B-226ENST00000541968 STK24Q9Y6E0 443 aa13.33□□□□□ -0.28
RAP1B-226ENST00000541968 PDCD7Q8N8D1 485 aaKnown RBP13.32□□□□□ -0.28
RAP1B-226ENST00000541968 MAMSTRQ6ZN01 415 aa13.31□□□□□ -0.28
RAP1B-226ENST00000541968 SCUBE2Q9NQ36 999 aa13.3□□□□□ -0.28
RAP1B-226ENST00000541968 ILDR1Q86SU0 546 aaPredicted RBP13.26□□□□□ -0.29
RAP1B-226ENST00000541968 DPY19L2Q6NUT2 758 aa13.25□□□□□ -0.29
RAP1B-226ENST00000541968 SOX12O15370 315 aa13.24□□□□□ -0.29
RAP1B-226ENST00000541968 L3MBTL3Q96JM7 780 aaPredicted RBP13.21□□□□□ -0.29
RAP1B-226ENST00000541968 PHF8Q9UPP1 1060 aa13.21□□□□□ -0.29
RAP1B-226ENST00000541968 CHGAP10645 457 aaKnown RBP13.18□□□□□ -0.3
RAP1B-226ENST00000541968 DCAF8L2P0C7V8 631 aa13.17□□□□□ -0.3
RAP1B-226ENST00000541968 AMER1Q5JTC6 1135 aaPredicted RBP13.16□□□□□ -0.3
RAP1B-226ENST00000541968 G3V3G9 751 aa13.15□□□□□ -0.3
RAP1B-226ENST00000541968 NLRP6P59044 892 aa13.15□□□□□ -0.3
RAP1B-226ENST00000541968 HS6ST3Q8IZP7 471 aa13.15□□□□□ -0.3
RAP1B-226ENST00000541968 MS4A4AQ96JQ5 239 aa13.15□□□□□ -0.3
RAP1B-226ENST00000541968 SLAIN1Q8ND83 568 aa13.14□□□□□ -0.31
RAP1B-226ENST00000541968 RTN4Q9NQC3 1192 aaKnown RBP13.14□□□□□ -0.31
RAP1B-226ENST00000541968 BOLA1Q9Y3E2 137 aa13.14□□□□□ -0.31
RAP1B-226ENST00000541968 C3orf67Q6ZVT6 689 aa13.13□□□□□ -0.31
RAP1B-226ENST00000541968 MFRPQ9BY79 579 aa13.13□□□□□ -0.31
RAP1B-226ENST00000541968 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.13□□□□□ -0.31
RAP1B-226ENST00000541968 FBXO22Q8NEZ5 403 aa13.11□□□□□ -0.31
RAP1B-226ENST00000541968 MICALL2Q8IY33 904 aa13.04□□□□□ -0.32
RAP1B-226ENST00000541968 TMEM121BQ9BXQ6 578 aaPredicted RBP13.04□□□□□ -0.32
RAP1B-226ENST00000541968 NKX1-1Q15270 411 aaPredicted RBP12.99□□□□□ -0.33
RAP1B-226ENST00000541968 FAM163AQ96GL9 167 aaPredicted RBP12.99□□□□□ -0.33
RAP1B-226ENST00000541968 DNAJC5Q9H3Z4 198 aa12.98□□□□□ -0.33
RAP1B-226ENST00000541968 PPP1R37O75864 691 aa12.96□□□□□ -0.33
RAP1B-226ENST00000541968 TMEM92Q6UXU6 159 aa12.91□□□□□ -0.34
RAP1B-226ENST00000541968 SNPHO15079 494 aa12.89□□□□□ -0.35
RAP1B-226ENST00000541968 LCE2DQ5TA82 110 aaPredicted RBP12.87□□□□□ -0.35
RAP1B-226ENST00000541968 RYDENQ9NUL5 291 aaKnown RBP12.87□□□□□ -0.35
RAP1B-226ENST00000541968 ST18O60284 1047 aa12.84□□□□□ -0.35
RAP1B-226ENST00000541968 GTPBP6O43824 516 aaPredicted RBP12.83□□□□□ -0.36
RAP1B-226ENST00000541968 POTEMA6NI47 508 aa12.8□□□□□ -0.36
RAP1B-226ENST00000541968 POTEGQ6S5H5 508 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms