RNA–Protein interactions for RNA: ENST00000541615.5

SNHG1-218, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5 BASIC

Gene SNHG1, Length 748 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-218ENST00000541615 PODXL2Q9NZ53 605 aa7.68□□□□□ -1.18
SNHG1-218ENST00000541615 NEFLP07196 543 aa7.67□□□□□ -1.18
SNHG1-218ENST00000541615 EHMT2Q96KQ7 1210 aa7.67□□□□□ -1.18
SNHG1-218ENST00000541615 FARP1Q9Y4F1 1045 aaPredicted RBP7.66□□□□□ -1.18
SNHG1-218ENST00000541615 DCAF1Q9Y4B6 1507 aa7.64□□□□□ -1.19
SNHG1-218ENST00000541615 STAG3Q9UJ98 1225 aa7.64□□□□□ -1.19
SNHG1-218ENST00000541615 CD44P16070 742 aaKnown RBP7.63□□□□□ -1.19
SNHG1-218ENST00000541615 CLCN6P51797 869 aa7.63□□□□□ -1.19
SNHG1-218ENST00000541615 PKNOX2Q96KN3 472 aa7.63□□□□□ -1.19
SNHG1-218ENST00000541615 TRIM26Q12899 539 aaPredicted RBP7.62□□□□□ -1.19
SNHG1-218ENST00000541615 CCDC180Q9P1Z9 1646 aa7.6□□□□□ -1.19
SNHG1-218ENST00000541615 SPDYE4A6NLX3 237 aa7.6□□□□□ -1.19
SNHG1-218ENST00000541615 NISCHQ9Y2I1 1504 aa7.59□□□□□ -1.19
SNHG1-218ENST00000541615 GLIPR1L2Q4G1C9 344 aa7.59□□□□□ -1.19
SNHG1-218ENST00000541615 CREBZFQ9NS37 354 aa7.57□□□□□ -1.2
SNHG1-218ENST00000541615 ANO8Q9HCE9 1232 aaPredicted RBP7.55□□□□□ -1.2
SNHG1-218ENST00000541615 ZNF579Q8NAF0 562 aaKnown RBP7.54□□□□□ -1.2
SNHG1-218ENST00000541615 LHX8Q68G74 356 aa7.53□□□□□ -1.2
SNHG1-218ENST00000541615 PLEKHG5O94827 1062 aa7.52□□□□□ -1.21
SNHG1-218ENST00000541615 POTEIP0CG38 1075 aa7.51□□□□□ -1.21
SNHG1-218ENST00000541615 ZRANB1Q9UGI0 708 aa7.5□□□□□ -1.21
SNHG1-218ENST00000541615 HOMEZQ8IX15 550 aa7.47□□□□□ -1.21
SNHG1-218ENST00000541615 CCER1Q8TC90 406 aaPredicted RBP7.47□□□□□ -1.21
SNHG1-218ENST00000541615 TSHZ2Q9NRE2 1034 aa7.47□□□□□ -1.21
SNHG1-218ENST00000541615 PAK3O75914 559 aaPredicted RBP7.46□□□□□ -1.22
SNHG1-218ENST00000541615 YTHDC1Q96MU7 727 aaKnown RBP7.46□□□□□ -1.22
SNHG1-218ENST00000541615 DCBLD2Q96PD2 775 aa7.46□□□□□ -1.22
SNHG1-218ENST00000541615 NPM1P06748 294 aaKnown RBP eCLIP7.45□□□□□ -1.22
SNHG1-218ENST00000541615 PDIA4P13667 645 aaKnown RBP7.45□□□□□ -1.22
SNHG1-218ENST00000541615 MNX1P50219 401 aaPredicted RBP7.45□□□□□ -1.22
SNHG1-218ENST00000541615 DIEXFQ68CQ4 756 aaKnown RBP7.45□□□□□ -1.22
SNHG1-218ENST00000541615 PROM2Q8N271 834 aa7.45□□□□□ -1.22
SNHG1-218ENST00000541615 PDE4CQ08493 712 aa7.43□□□□□ -1.22
SNHG1-218ENST00000541615 ZNF326Q5BKZ1 582 aaKnown RBP7.42□□□□□ -1.22
SNHG1-218ENST00000541615 GALR2O43603 387 aaPredicted RBP7.41□□□□□ -1.22
SNHG1-218ENST00000541615 TAF7LQ5H9L4 462 aa7.41□□□□□ -1.22
SNHG1-218ENST00000541615 SALL2Q9Y467 1007 aaPredicted RBP7.38□□□□□ -1.23
SNHG1-218ENST00000541615 PHF12Q96QT6 1004 aa7.37□□□□□ -1.23
SNHG1-218ENST00000541615 DEKP35659 375 aaKnown RBP7.36□□□□□ -1.23
SNHG1-218ENST00000541615 FANCIQ9NVI1 1328 aa7.35□□□□□ -1.23
SNHG1-218ENST00000541615 FGD1P98174 961 aa7.35□□□□□ -1.23
SNHG1-218ENST00000541615 AMER1Q5JTC6 1135 aaPredicted RBP7.33□□□□□ -1.24
SNHG1-218ENST00000541615 RSPH6AQ9H0K4 717 aa7.33□□□□□ -1.24
SNHG1-218ENST00000541615 SUPT16HQ9Y5B9 1047 aaKnown RBP7.33□□□□□ -1.24
SNHG1-218ENST00000541615 MYO15BQ96JP2 1530 aa7.32□□□□□ -1.24
SNHG1-218ENST00000541615 KLHL34Q8N239 644 aa7.32□□□□□ -1.24
SNHG1-218ENST00000541615 DCAF8L2P0C7V8 631 aa7.31□□□□□ -1.24
SNHG1-218ENST00000541615 ASTLQ6HA08 431 aaPredicted RBP7.29□□□□□ -1.24
SNHG1-218ENST00000541615 MS4A3Q96HJ5 214 aa7.29□□□□□ -1.24
SNHG1-218ENST00000541615 TIMELESSQ9UNS1 1208 aa7.29□□□□□ -1.24
SNHG1-218ENST00000541615 CDK11AQ9UQ88 783 aaPredicted RBP7.29□□□□□ -1.24
SNHG1-218ENST00000541615 TRIM41Q8WV44 630 aa7.28□□□□□ -1.24
SNHG1-218ENST00000541615 RTN4Q9NQC3 1192 aaKnown RBP7.28□□□□□ -1.24
SNHG1-218ENST00000541615 RBM19Q9Y4C8 960 aaKnown RBP7.27□□□□□ -1.25
SNHG1-218ENST00000541615 CCDC61Q9Y6R9 512 aa7.27□□□□□ -1.25
SNHG1-218ENST00000541615 OTUD5Q96G74 571 aa7.26□□□□□ -1.25
SNHG1-218ENST00000541615 TSPYL2Q9H2G4 693 aaPredicted RBP7.26□□□□□ -1.25
SNHG1-218ENST00000541615 POTEB2H3BUK9 544 aa7.25□□□□□ -1.25
SNHG1-218ENST00000541615 ATMINO43313 823 aaPredicted RBP7.25□□□□□ -1.25
SNHG1-218ENST00000541615 MIER1Q8N108 512 aa7.25□□□□□ -1.25
SNHG1-218ENST00000541615 ZMYND15Q9H091 742 aa7.25□□□□□ -1.25
SNHG1-218ENST00000541615 C7P10643 843 aa7.24□□□□□ -1.25
SNHG1-218ENST00000541615 BRD2P25440 801 aaKnown RBP7.24□□□□□ -1.25
SNHG1-218ENST00000541615 AAMPQ13685 434 aa7.24□□□□□ -1.25
SNHG1-218ENST00000541615 SLC39A7Q92504 469 aa7.24□□□□□ -1.25
SNHG1-218ENST00000541615 CCDC136Q96JN2 1154 aa7.24□□□□□ -1.25
SNHG1-218ENST00000541615 ZNF316A6NFI3 1004 aaPredicted RBP7.23□□□□□ -1.25
SNHG1-218ENST00000541615 KIF12Q96FN5 646 aa7.23□□□□□ -1.25
SNHG1-218ENST00000541615 METRNQ9UJH8 293 aa7.23□□□□□ -1.25
SNHG1-218ENST00000541615 FBXO3Q9UK99 471 aa7.23□□□□□ -1.25
SNHG1-218ENST00000541615 C11orf95C9JLR9 678 aaPredicted RBP7.22□□□□□ -1.25
SNHG1-218ENST00000541615 NPM2Q86SE8 214 aaKnown RBP7.21□□□□□ -1.26
SNHG1-218ENST00000541615 RTL5Q5HYW3 569 aaPredicted RBP7.2□□□□□ -1.26
SNHG1-218ENST00000541615 ZBTB47Q9UFB7 747 aaPredicted RBP7.2□□□□□ -1.26
SNHG1-218ENST00000541615 TULP1O00294 542 aaPredicted RBP7.19□□□□□ -1.26
SNHG1-218ENST00000541615 NCLP19338 710 aaKnown RBP7.19□□□□□ -1.26
SNHG1-218ENST00000541615 RSPH4AQ5TD94 716 aa7.19□□□□□ -1.26
SNHG1-218ENST00000541615 RASEFQ8IZ41 740 aa7.19□□□□□ -1.26
SNHG1-218ENST00000541615 RBM10P98175 930 aaKnown RBP7.18□□□□□ -1.26
SNHG1-218ENST00000541615 PLCD3Q8N3E9 789 aa7.18□□□□□ -1.26
SNHG1-218ENST00000541615 MAP3K13O43283 966 aa7.17□□□□□ -1.26
SNHG1-218ENST00000541615 TIE1P35590 1138 aa7.17□□□□□ -1.26
SNHG1-218ENST00000541615 ATN1P54259 1190 aaPredicted RBP7.17□□□□□ -1.26
SNHG1-218ENST00000541615 VSIG10Q8N0Z9 540 aa7.17□□□□□ -1.26
SNHG1-218ENST00000541615 BCL11BQ9C0K0 894 aaPredicted RBP7.17□□□□□ -1.26
SNHG1-218ENST00000541615 BCCIPQ9P287 314 aaKnown RBP eCLIP7.17□□□□□ -1.26
SNHG1-218ENST00000541615 USP35Q9P2H5 1018 aa7.17□□□□□ -1.26
SNHG1-218ENST00000541615 RRP9O43818 475 aaKnown RBP7.16□□□□□ -1.26
SNHG1-218ENST00000541615 MAMSTRQ6ZN01 415 aa7.16□□□□□ -1.26
SNHG1-218ENST00000541615 SGIP1Q9BQI5 828 aa7.16□□□□□ -1.26
SNHG1-218ENST00000541615 BMP2KQ9NSY1 1161 aaPredicted RBP7.16□□□□□ -1.26
SNHG1-218ENST00000541615 HSP90B1P14625 803 aaKnown RBP7.15□□□□□ -1.26
SNHG1-218ENST00000541615 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.15□□□□□ -1.26
SNHG1-218ENST00000541615 POTEJP0CG39 1038 aa7.14□□□□□ -1.27
SNHG1-218ENST00000541615 NAP1L5Q96NT1 182 aaPredicted RBP7.14□□□□□ -1.27
SNHG1-218ENST00000541615 NUBP1P53384 320 aa7.13□□□□□ -1.27
SNHG1-218ENST00000541615 TRPC6Q9Y210 931 aa7.13□□□□□ -1.27
SNHG1-218ENST00000541615 FKBP8Q14318 412 aa7.12□□□□□ -1.27
SNHG1-218ENST00000541615 SCUBE2Q9NQ36 999 aa7.12□□□□□ -1.27
SNHG1-218ENST00000541615 HMGB1P09429 215 aaKnown RBP7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms