RNA–Protein interactions for RNA: ENST00000541168.1

SMCO2-205, Transcript of single-pass membrane protein with coiled-coil domains 2, humanhuman

TSL 3

Gene SMCO2, Length 922 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO2-205ENST00000541168 PELP1Q8IZL8 1130 aaKnown RBP18.59■□□□□ 0.57
SMCO2-205ENST00000541168 ASTLQ6HA08 431 aaPredicted RBP18.57■□□□□ 0.56
SMCO2-205ENST00000541168 RASEFQ8IZ41 740 aa18.57■□□□□ 0.56
SMCO2-205ENST00000541168 KIF12Q96FN5 646 aa18.55■□□□□ 0.56
SMCO2-205ENST00000541168 ATMINO43313 823 aaPredicted RBP18.53■□□□□ 0.56
SMCO2-205ENST00000541168 POTEB2H3BUK9 544 aa18.49■□□□□ 0.55
SMCO2-205ENST00000541168 ZBTB47Q9UFB7 747 aaPredicted RBP18.49■□□□□ 0.55
SMCO2-205ENST00000541168 METRNQ9UJH8 293 aa18.46■□□□□ 0.55
SMCO2-205ENST00000541168 SLC39A7Q92504 469 aa18.45■□□□□ 0.54
SMCO2-205ENST00000541168 MAP3K13O43283 966 aa18.43■□□□□ 0.54
SMCO2-205ENST00000541168 OTUD5Q96G74 571 aa18.43■□□□□ 0.54
SMCO2-205ENST00000541168 C7P10643 843 aa18.41■□□□□ 0.54
SMCO2-205ENST00000541168 ATN1P54259 1190 aaPredicted RBP18.39■□□□□ 0.53
SMCO2-205ENST00000541168 NUBP1P53384 320 aa18.38■□□□□ 0.53
SMCO2-205ENST00000541168 TRPC6Q9Y210 931 aa18.38■□□□□ 0.53
SMCO2-205ENST00000541168 BMP2KQ9NSY1 1161 aaPredicted RBP18.36■□□□□ 0.53
SMCO2-205ENST00000541168 TIE1P35590 1138 aa18.32■□□□□ 0.52
SMCO2-205ENST00000541168 FAM212AQ96EL1 285 aa18.29■□□□□ 0.52
SMCO2-205ENST00000541168 FBXO3Q9UK99 471 aa18.28■□□□□ 0.52
SMCO2-205ENST00000541168 SGIP1Q9BQI5 828 aa18.26■□□□□ 0.51
SMCO2-205ENST00000541168 PCDHB13Q9Y5F0 798 aa18.26■□□□□ 0.51
SMCO2-205ENST00000541168 TTLL13PA6NNM8 815 aa18.22■□□□□ 0.51
SMCO2-205ENST00000541168 POTEJP0CG39 1038 aa18.22■□□□□ 0.51
SMCO2-205ENST00000541168 MAMSTRQ6ZN01 415 aa18.18■□□□□ 0.5
SMCO2-205ENST00000541168 POTEFA5A3E0 1075 aa18.15■□□□□ 0.5
SMCO2-205ENST00000541168 IFNL1Q8IU54 200 aa18.15■□□□□ 0.5
SMCO2-205ENST00000541168 TRIM35Q9UPQ4 493 aa18.11■□□□□ 0.49
SMCO2-205ENST00000541168 DCAF8Q5TAQ9 597 aa18.09■□□□□ 0.49
SMCO2-205ENST00000541168 SCUBE2Q9NQ36 999 aa18.09■□□□□ 0.49
SMCO2-205ENST00000541168 VASPP50552 380 aaPredicted RBP18.08■□□□□ 0.48
SMCO2-205ENST00000541168 SEC24BO95487 1268 aa18.06■□□□□ 0.48
SMCO2-205ENST00000541168 IER5LQ5T953 404 aa18.05■□□□□ 0.48
SMCO2-205ENST00000541168 COLQQ9Y215 455 aaPredicted RBP18.05■□□□□ 0.48
SMCO2-205ENST00000541168 TMEM106CQ9BVX2 250 aa18.03■□□□□ 0.48
SMCO2-205ENST00000541168 PYGBP11216 843 aa18.02■□□□□ 0.48
SMCO2-205ENST00000541168 KLHL34Q8N239 644 aa18.01■□□□□ 0.47
SMCO2-205ENST00000541168 POTEMA6NI47 508 aa17.96■□□□□ 0.47
SMCO2-205ENST00000541168 POTEGQ6S5H5 508 aa17.92■□□□□ 0.46
SMCO2-205ENST00000541168 GSE1Q14687 1217 aa17.89■□□□□ 0.45
SMCO2-205ENST00000541168 PCDHB8Q9UN66 801 aa17.89■□□□□ 0.45
SMCO2-205ENST00000541168 PLSCR2Q9NRY7 297 aa17.87■□□□□ 0.45
SMCO2-205ENST00000541168 PLCG2P16885 1265 aa17.86■□□□□ 0.45
SMCO2-205ENST00000541168 IRX5P78411 483 aaPredicted RBP17.81■□□□□ 0.44
SMCO2-205ENST00000541168 LCE2DQ5TA82 110 aaPredicted RBP17.81■□□□□ 0.44
SMCO2-205ENST00000541168 FAM163AQ96GL9 167 aaPredicted RBP17.81■□□□□ 0.44
SMCO2-205ENST00000541168 ZNF467Q7Z7K2 595 aaPredicted RBP17.78■□□□□ 0.44
SMCO2-205ENST00000541168 OCEL1Q9H607 264 aa17.74■□□□□ 0.43
SMCO2-205ENST00000541168 CHRM1P11229 460 aaPredicted RBP17.73■□□□□ 0.43
SMCO2-205ENST00000541168 IFNLR1Q8IU57 520 aaPredicted RBP17.72■□□□□ 0.43
SMCO2-205ENST00000541168 SPOCK2Q92563 424 aa17.71■□□□□ 0.43
SMCO2-205ENST00000541168 SLAIN1Q8ND83 568 aa17.7■□□□□ 0.42
SMCO2-205ENST00000541168 PCDH10Q9P2E7 1040 aa17.65■□□□□ 0.42
SMCO2-205ENST00000541168 PSEN1P49768 467 aa17.62■□□□□ 0.41
SMCO2-205ENST00000541168 GOLGA2Q08379 1002 aa17.62■□□□□ 0.41
SMCO2-205ENST00000541168 CIZ1Q9ULV3 898 aaPredicted RBP17.62■□□□□ 0.41
SMCO2-205ENST00000541168 MKRN3Q13064 507 aaKnown RBP17.59■□□□□ 0.41
SMCO2-205ENST00000541168 PDCD7Q8N8D1 485 aaKnown RBP17.56■□□□□ 0.4
SMCO2-205ENST00000541168 PDAP1Q13442 181 aaKnown RBP17.55■□□□□ 0.4
SMCO2-205ENST00000541168 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.53■□□□□ 0.4
SMCO2-205ENST00000541168 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.49■□□□□ 0.39
SMCO2-205ENST00000541168 ST18O60284 1047 aa17.48■□□□□ 0.39
SMCO2-205ENST00000541168 C3orf67Q6ZVT6 689 aa17.44■□□□□ 0.38
SMCO2-205ENST00000541168 L3MBTL3Q96JM7 780 aaPredicted RBP17.44■□□□□ 0.38
SMCO2-205ENST00000541168 CABP2Q9NPB3 220 aa17.41■□□□□ 0.38
SMCO2-205ENST00000541168 SNPHO15079 494 aa17.39■□□□□ 0.37
SMCO2-205ENST00000541168 TRIM41Q8WV44 630 aa17.39■□□□□ 0.37
SMCO2-205ENST00000541168 ILDR1Q86SU0 546 aaPredicted RBP17.38■□□□□ 0.37
SMCO2-205ENST00000541168 CDAN1Q8IWY9 1227 aa17.36■□□□□ 0.37
SMCO2-205ENST00000541168 TMEM121BQ9BXQ6 578 aaPredicted RBP17.33■□□□□ 0.36
SMCO2-205ENST00000541168 DPY19L2Q6NUT2 758 aa17.3■□□□□ 0.36
SMCO2-205ENST00000541168 G3V3G9 751 aa17.23■□□□□ 0.35
SMCO2-205ENST00000541168 BOLA1Q9Y3E2 137 aa17.22■□□□□ 0.35
SMCO2-205ENST00000541168 MARVELD3Q96A59 401 aa17.2■□□□□ 0.34
SMCO2-205ENST00000541168 EFCAB3Q8N7B9 438 aa17.18■□□□□ 0.34
SMCO2-205ENST00000541168 RIOK3O14730 519 aaKnown RBP17.16■□□□□ 0.34
SMCO2-205ENST00000541168 RNF25Q96BH1 459 aaPredicted RBP17.15■□□□□ 0.34
SMCO2-205ENST00000541168 EMP3P54852 163 aa17.1■□□□□ 0.33
SMCO2-205ENST00000541168 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.08■□□□□ 0.32
SMCO2-205ENST00000541168 VGFO15240 615 aaPredicted RBP17.08■□□□□ 0.32
SMCO2-205ENST00000541168 ZFP91Q96JP5 570 aaPredicted RBP17.08■□□□□ 0.32
SMCO2-205ENST00000541168 SOX12O15370 315 aa17.01■□□□□ 0.31
SMCO2-205ENST00000541168 HOXB3P14651 431 aaPredicted RBP17■□□□□ 0.31
SMCO2-205ENST00000541168 MICALL2Q8IY33 904 aa16.98■□□□□ 0.31
SMCO2-205ENST00000541168 HS3ST6Q96QI5 342 aa16.97■□□□□ 0.31
SMCO2-205ENST00000541168 FAM205CA6NFA0 338 aa16.96■□□□□ 0.31
SMCO2-205ENST00000541168 MS4A4AQ96JQ5 239 aa16.95■□□□□ 0.3
SMCO2-205ENST00000541168 PHF8Q9UPP1 1060 aa16.95■□□□□ 0.3
SMCO2-205ENST00000541168 POTEB3A0JP26 581 aa16.93■□□□□ 0.3
SMCO2-205ENST00000541168 POTEBQ6S5H4 581 aa16.93■□□□□ 0.3
SMCO2-205ENST00000541168 SPNS2Q8IVW8 549 aa16.93■□□□□ 0.3
SMCO2-205ENST00000541168 DOK7Q18PE1 504 aa16.92■□□□□ 0.3
SMCO2-205ENST00000541168 ZNF710Q8N1W2 664 aa16.92■□□□□ 0.3
SMCO2-205ENST00000541168 TAOK2Q9UL54 1235 aa16.9■□□□□ 0.3
SMCO2-205ENST00000541168 MMRN1Q13201 1228 aa16.89■□□□□ 0.29
SMCO2-205ENST00000541168 TMEM92Q6UXU6 159 aa16.88■□□□□ 0.29
SMCO2-205ENST00000541168 BCL11BQ9C0K0 894 aaPredicted RBP16.88■□□□□ 0.29
SMCO2-205ENST00000541168 HOXB1P14653 301 aaPredicted RBP16.87■□□□□ 0.29
SMCO2-205ENST00000541168 KRTAP3-3Q9BYR6 98 aa16.85■□□□□ 0.29
SMCO2-205ENST00000541168 KRTAP3-2Q9BYR7 98 aa16.85■□□□□ 0.29
SMCO2-205ENST00000541168 RIMBP2O15034 1052 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms