RNA–Protein interactions for RNA: ENST00000540606.5

ATE1-208, Transcript of arginyltransferase 1, humanhuman

TSL 2 BASIC

Gene ATE1, Length 5,165 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATE1-208ENST00000540606 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.77■□□□□ 0.44
ATE1-208ENST00000540606 CLIP1P30622 1438 aa17.77■□□□□ 0.43
ATE1-208ENST00000540606 ZCCHC6Q5VYS8 1495 aaKnown RBP17.77■□□□□ 0.43
ATE1-208ENST00000540606 IRX6P78412 446 aaPredicted RBP17.76■□□□□ 0.43
ATE1-208ENST00000540606 EIF4G2P78344 907 aaKnown RBP eCLIP17.73■□□□□ 0.43
ATE1-208ENST00000540606 CFDP1Q9UEE9 299 aaPredicted RBP17.7■□□□□ 0.42
ATE1-208ENST00000540606 MIER1Q8N108 512 aa17.69■□□□□ 0.42
ATE1-208ENST00000540606 PPM1GO15355 546 aaPredicted RBP17.68■□□□□ 0.42
ATE1-208ENST00000540606 ANP32BQ92688 251 aaKnown RBP17.67■□□□□ 0.42
ATE1-208ENST00000540606 ARXQ96QS3 562 aa17.66■□□□□ 0.42
ATE1-208ENST00000540606 HAP1P54257 671 aaPredicted RBP17.65■□□□□ 0.42
ATE1-208ENST00000540606 LMOD2Q6P5Q4 547 aa17.61■□□□□ 0.41
ATE1-208ENST00000540606 DCAF1Q9Y4B6 1507 aa17.6■□□□□ 0.41
ATE1-208ENST00000540606 MYH16Q9H6N6 1097 aa17.59■□□□□ 0.41
ATE1-208ENST00000540606 NEUROD2Q15784 382 aa17.57■□□□□ 0.4
ATE1-208ENST00000540606 NBR1Q14596 966 aa17.57■□□□□ 0.4
ATE1-208ENST00000540606 RSF1Q96T23 1441 aaPredicted RBP17.56■□□□□ 0.4
ATE1-208ENST00000540606 CARD11Q9BXL7 1154 aa17.55■□□□□ 0.4
ATE1-208ENST00000540606 EIF5BO60841 1220 aaKnown RBP17.55■□□□□ 0.4
ATE1-208ENST00000540606 KNSTRNQ9Y448 316 aa17.54■□□□□ 0.4
ATE1-208ENST00000540606 WRNQ14191 1432 aaPredicted RBP eCLIP17.53■□□□□ 0.4
ATE1-208ENST00000540606 TNNT2P45379 298 aaPredicted RBP17.52■□□□□ 0.4
ATE1-208ENST00000540606 CEP162Q5TB80 1403 aa17.52■□□□□ 0.39
ATE1-208ENST00000540606 TRHP20396 242 aaPredicted RBP17.51■□□□□ 0.39
ATE1-208ENST00000540606 MLECQ14165 292 aa17.51■□□□□ 0.39
ATE1-208ENST00000540606 SIN3AQ96ST3 1273 aa17.51■□□□□ 0.39
ATE1-208ENST00000540606 CFAP53Q96M91 514 aa17.5■□□□□ 0.39
ATE1-208ENST00000540606 POGKQ9P215 609 aa17.5■□□□□ 0.39
ATE1-208ENST00000540606 LAS1LQ9Y4W2 734 aaKnown RBP17.48■□□□□ 0.39
ATE1-208ENST00000540606 KIF27Q86VH2 1401 aa17.47■□□□□ 0.39
ATE1-208ENST00000540606 GOLGA3Q08378 1498 aa17.46■□□□□ 0.39
ATE1-208ENST00000540606 BAZ1BQ9UIG0 1483 aaKnown RBP17.46■□□□□ 0.39
ATE1-208ENST00000540606 CDCA8Q53HL2 280 aa17.45■□□□□ 0.38
ATE1-208ENST00000540606 ERCC6Q03468 1493 aa17.45■□□□□ 0.38
ATE1-208ENST00000540606 RB1CC1Q8TDY2 1594 aa17.44■□□□□ 0.38
ATE1-208ENST00000540606 SOX12O15370 315 aa17.42■□□□□ 0.38
ATE1-208ENST00000540606 EEA1Q15075 1411 aa17.4■□□□□ 0.38
ATE1-208ENST00000540606 MAPK8IP3Q9UPT6 1336 aa17.38■□□□□ 0.37
ATE1-208ENST00000540606 SAFB2Q14151 953 aaKnown RBP eCLIP17.38■□□□□ 0.37
ATE1-208ENST00000540606 CC2D1BQ5T0F9 858 aaKnown RBP17.38■□□□□ 0.37
ATE1-208ENST00000540606 U2SURPO15042 1029 aaKnown RBP17.38■□□□□ 0.37
ATE1-208ENST00000540606 FTSJ3Q8IY81 847 aaKnown RBP17.37■□□□□ 0.37
ATE1-208ENST00000540606 SUPT16HQ9Y5B9 1047 aaKnown RBP17.37■□□□□ 0.37
ATE1-208ENST00000540606 DCAF11Q8TEB1 546 aa17.36■□□□□ 0.37
ATE1-208ENST00000540606 FRAT1Q92837 279 aaPredicted RBP17.35■□□□□ 0.37
ATE1-208ENST00000540606 NUDCQ9Y266 331 aa17.35■□□□□ 0.37
ATE1-208ENST00000540606 MYO15BQ96JP2 1530 aa17.35■□□□□ 0.37
ATE1-208ENST00000540606 GGT6Q6P531 493 aa17.35■□□□□ 0.37
ATE1-208ENST00000540606 TPRNQ4KMQ1 711 aa17.34■□□□□ 0.37
ATE1-208ENST00000540606 CCNB3Q8WWL7 1395 aa17.32■□□□□ 0.36
ATE1-208ENST00000540606 NPHP1O15259 732 aa17.32■□□□□ 0.36
ATE1-208ENST00000540606 TNIKQ9UKE5 1360 aa17.32■□□□□ 0.36
ATE1-208ENST00000540606 TAOK2Q9UL54 1235 aa17.31■□□□□ 0.36
ATE1-208ENST00000540606 RGS3P49796 1198 aa17.29■□□□□ 0.36
ATE1-208ENST00000540606 SRPK2P78362 688 aaKnown RBP17.28■□□□□ 0.36
ATE1-208ENST00000540606 CEP164Q9UPV0 1460 aa17.28■□□□□ 0.36
ATE1-208ENST00000540606 CDK11BP21127 795 aaKnown RBP17.28■□□□□ 0.36
ATE1-208ENST00000540606 CARMIL1Q5VZK9 1371 aa17.27■□□□□ 0.36
ATE1-208ENST00000540606 BECN1Q14457 450 aa17.26■□□□□ 0.35
ATE1-208ENST00000540606 STK26Q9P289 416 aa17.26■□□□□ 0.35
ATE1-208ENST00000540606 NCLP19338 710 aaKnown RBP17.26■□□□□ 0.35
ATE1-208ENST00000540606 TULP1O00294 542 aaPredicted RBP17.25■□□□□ 0.35
ATE1-208ENST00000540606 FOXD1Q16676 465 aa17.24■□□□□ 0.35
ATE1-208ENST00000540606 CUX2O14529 1486 aa17.23■□□□□ 0.35
ATE1-208ENST00000540606 CECR2Q9BXF3 1484 aa17.23■□□□□ 0.35
ATE1-208ENST00000540606 TMF1P82094 1093 aa17.22■□□□□ 0.35
ATE1-208ENST00000540606 EIF4G1Q04637 1599 aaKnown RBP17.21■□□□□ 0.35
ATE1-208ENST00000540606 OS9Q13438 667 aaPredicted RBP17.21■□□□□ 0.35
ATE1-208ENST00000540606 CCDC180Q9P1Z9 1646 aa17.2■□□□□ 0.34
ATE1-208ENST00000540606 GOLGA6L22H0YM25 854 aa17.18■□□□□ 0.34
ATE1-208ENST00000540606 PKD2Q13563 968 aa17.18■□□□□ 0.34
ATE1-208ENST00000540606 SOGA1O94964 1423 aa17.18■□□□□ 0.34
ATE1-208ENST00000540606 HDGFP51858 240 aaKnown RBP17.17■□□□□ 0.34
ATE1-208ENST00000540606 CASC1Q6TDU7 716 aa17.17■□□□□ 0.34
ATE1-208ENST00000540606 KANK1Q14678 1352 aa17.17■□□□□ 0.34
ATE1-208ENST00000540606 NACADO15069 1562 aa17.16■□□□□ 0.34
ATE1-208ENST00000540606 MORC1Q86VD1 984 aa17.16■□□□□ 0.34
ATE1-208ENST00000540606 DDRGK1Q96HY6 314 aa17.16■□□□□ 0.34
ATE1-208ENST00000540606 TDRD9Q8NDG6 1382 aaKnown RBP17.15■□□□□ 0.34
ATE1-208ENST00000540606 ZRSR1Q15695 479 aaKnown RBP17.15■□□□□ 0.34
ATE1-208ENST00000540606 FGD1P98174 961 aa17.14■□□□□ 0.33
ATE1-208ENST00000540606 FHAD1B1AJZ9 1412 aa17.14■□□□□ 0.33
ATE1-208ENST00000540606 KANK4Q5T7N3 995 aaPredicted RBP17.13■□□□□ 0.33
ATE1-208ENST00000540606 PAK3O75914 559 aaPredicted RBP17.13■□□□□ 0.33
ATE1-208ENST00000540606 B4GALNT3Q6L9W6 998 aa17.13■□□□□ 0.33
ATE1-208ENST00000540606 KCNJ4P48050 445 aa17.12■□□□□ 0.33
ATE1-208ENST00000540606 NAP1L2Q9ULW6 460 aaPredicted RBP17.11■□□□□ 0.33
ATE1-208ENST00000540606 TRIM44Q96DX7 344 aaPredicted RBP17.11■□□□□ 0.33
ATE1-208ENST00000540606 GOLGA2Q08379 1002 aa17.1■□□□□ 0.33
ATE1-208ENST00000540606 HSPA5P11021 654 aaKnown RBP17.07■□□□□ 0.32
ATE1-208ENST00000540606 PNNQ9H307 717 aaKnown RBP17.07■□□□□ 0.32
ATE1-208ENST00000540606 ZNF330Q9Y3S2 320 aaPredicted RBP17.07■□□□□ 0.32
ATE1-208ENST00000540606 EFCAB2Q5VUJ9 269 aa17.07■□□□□ 0.32
ATE1-208ENST00000540606 PPP4R2Q9NY27 417 aa17.07■□□□□ 0.32
ATE1-208ENST00000540606 PTMAP06454 111 aaKnown RBP17.06■□□□□ 0.32
ATE1-208ENST00000540606 APBB1O00213 710 aa17.06■□□□□ 0.32
ATE1-208ENST00000540606 PLCB2Q00722 1185 aa17.06■□□□□ 0.32
ATE1-208ENST00000540606 BAZ1AQ9NRL2 1556 aaPredicted RBP17.06■□□□□ 0.32
ATE1-208ENST00000540606 KIF3BO15066 747 aa17.06■□□□□ 0.32
ATE1-208ENST00000540606 NUTM2DQ5VT03 806 aaPredicted RBP17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms