RNA–Protein interactions for RNA: ENST00000540250.1

LINC00943-206, long intergenic non-protein coding RNA 943, humanhuman

TSL 4

Gene LINC00943, Length 1,190 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00943-206ENST00000540250 ASTLQ6HA08 431 aaPredicted RBP17.32■□□□□ 0.36
LINC00943-206ENST00000540250 OTUD5Q96G74 571 aa17.32■□□□□ 0.36
LINC00943-206ENST00000540250 ATMINO43313 823 aaPredicted RBP17.3■□□□□ 0.36
LINC00943-206ENST00000540250 PLEKHG5O94827 1062 aa17.3■□□□□ 0.36
LINC00943-206ENST00000540250 KIF12Q96FN5 646 aa17.27■□□□□ 0.36
LINC00943-206ENST00000540250 RASEFQ8IZ41 740 aa17.26■□□□□ 0.35
LINC00943-206ENST00000540250 METRNQ9UJH8 293 aa17.25■□□□□ 0.35
LINC00943-206ENST00000540250 PLCD3Q8N3E9 789 aa17.2■□□□□ 0.34
LINC00943-206ENST00000540250 SLC39A7Q92504 469 aa17.2■□□□□ 0.34
LINC00943-206ENST00000540250 C7P10643 843 aa17.18■□□□□ 0.34
LINC00943-206ENST00000540250 ATN1P54259 1190 aaPredicted RBP17.17■□□□□ 0.34
LINC00943-206ENST00000540250 TRPC6Q9Y210 931 aa17.17■□□□□ 0.34
LINC00943-206ENST00000540250 MAP3K13O43283 966 aa17.16■□□□□ 0.34
LINC00943-206ENST00000540250 FKBP8Q14318 412 aa17.15■□□□□ 0.34
LINC00943-206ENST00000540250 BMP2KQ9NSY1 1161 aaPredicted RBP17.13■□□□□ 0.33
LINC00943-206ENST00000540250 POTEJP0CG39 1038 aa17.12■□□□□ 0.33
LINC00943-206ENST00000540250 NUBP1P53384 320 aa17.05■□□□□ 0.32
LINC00943-206ENST00000540250 TIE1P35590 1138 aa17.04■□□□□ 0.32
LINC00943-206ENST00000540250 ZBTB47Q9UFB7 747 aaPredicted RBP17.03■□□□□ 0.32
LINC00943-206ENST00000540250 POTEFA5A3E0 1075 aa16.99■□□□□ 0.31
LINC00943-206ENST00000540250 TTLL13PA6NNM8 815 aa16.97■□□□□ 0.31
LINC00943-206ENST00000540250 MAMSTRQ6ZN01 415 aa16.96■□□□□ 0.31
LINC00943-206ENST00000540250 PCDHB13Q9Y5F0 798 aa16.95■□□□□ 0.3
LINC00943-206ENST00000540250 SGIP1Q9BQI5 828 aa16.93■□□□□ 0.3
LINC00943-206ENST00000540250 POTEMA6NI47 508 aa16.9■□□□□ 0.3
LINC00943-206ENST00000540250 FAM212AQ96EL1 285 aa16.9■□□□□ 0.3
LINC00943-206ENST00000540250 PLSCR2Q9NRY7 297 aa16.9■□□□□ 0.3
LINC00943-206ENST00000540250 SCUBE2Q9NQ36 999 aa16.88■□□□□ 0.29
LINC00943-206ENST00000540250 IFNL1Q8IU54 200 aa16.87■□□□□ 0.29
LINC00943-206ENST00000540250 COLQQ9Y215 455 aaPredicted RBP16.87■□□□□ 0.29
LINC00943-206ENST00000540250 POTEGQ6S5H5 508 aa16.86■□□□□ 0.29
LINC00943-206ENST00000540250 TRIM35Q9UPQ4 493 aa16.86■□□□□ 0.29
LINC00943-206ENST00000540250 SEC24BO95487 1268 aa16.83■□□□□ 0.28
LINC00943-206ENST00000540250 IER5LQ5T953 404 aa16.78■□□□□ 0.28
LINC00943-206ENST00000540250 FBXO3Q9UK99 471 aa16.78■□□□□ 0.28
LINC00943-206ENST00000540250 TMEM106CQ9BVX2 250 aa16.77■□□□□ 0.28
LINC00943-206ENST00000540250 DCAF8Q5TAQ9 597 aa16.76■□□□□ 0.27
LINC00943-206ENST00000540250 LCE2DQ5TA82 110 aaPredicted RBP16.75■□□□□ 0.27
LINC00943-206ENST00000540250 FAM163AQ96GL9 167 aaPredicted RBP16.73■□□□□ 0.27
LINC00943-206ENST00000540250 PYGBP11216 843 aa16.72■□□□□ 0.27
LINC00943-206ENST00000540250 VASPP50552 380 aaPredicted RBP16.64■□□□□ 0.25
LINC00943-206ENST00000540250 PCDHB8Q9UN66 801 aa16.63■□□□□ 0.25
LINC00943-206ENST00000540250 PLCG2P16885 1265 aa16.61■□□□□ 0.25
LINC00943-206ENST00000540250 KLHL34Q8N239 644 aa16.6■□□□□ 0.25
LINC00943-206ENST00000540250 IRX5P78411 483 aaPredicted RBP16.59■□□□□ 0.25
LINC00943-206ENST00000540250 PCDH10Q9P2E7 1040 aa16.56■□□□□ 0.24
LINC00943-206ENST00000540250 SLAIN1Q8ND83 568 aa16.53■□□□□ 0.24
LINC00943-206ENST00000540250 GSE1Q14687 1217 aa16.51■□□□□ 0.23
LINC00943-206ENST00000540250 OCEL1Q9H607 264 aa16.5■□□□□ 0.23
LINC00943-206ENST00000540250 ZNF467Q7Z7K2 595 aaPredicted RBP16.43■□□□□ 0.22
LINC00943-206ENST00000540250 CHRM1P11229 460 aaPredicted RBP16.39■□□□□ 0.21
LINC00943-206ENST00000540250 ST18O60284 1047 aa16.37■□□□□ 0.21
LINC00943-206ENST00000540250 IFNLR1Q8IU57 520 aaPredicted RBP16.34■□□□□ 0.21
LINC00943-206ENST00000540250 PDCD7Q8N8D1 485 aaKnown RBP16.34■□□□□ 0.21
LINC00943-206ENST00000540250 PSEN1P49768 467 aa16.33■□□□□ 0.2
LINC00943-206ENST00000540250 GOLGA2Q08379 1002 aa16.31■□□□□ 0.2
LINC00943-206ENST00000540250 MKRN3Q13064 507 aaKnown RBP16.31■□□□□ 0.2
LINC00943-206ENST00000540250 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.31■□□□□ 0.2
LINC00943-206ENST00000540250 CDAN1Q8IWY9 1227 aa16.3■□□□□ 0.2
LINC00943-206ENST00000540250 SPOCK2Q92563 424 aa16.3■□□□□ 0.2
LINC00943-206ENST00000540250 CIZ1Q9ULV3 898 aaPredicted RBP16.26■□□□□ 0.19
LINC00943-206ENST00000540250 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.24■□□□□ 0.19
LINC00943-206ENST00000540250 PDAP1Q13442 181 aaKnown RBP16.23■□□□□ 0.19
LINC00943-206ENST00000540250 L3MBTL3Q96JM7 780 aaPredicted RBP16.2■□□□□ 0.18
LINC00943-206ENST00000540250 SNPHO15079 494 aa16.19■□□□□ 0.18
LINC00943-206ENST00000540250 C3orf67Q6ZVT6 689 aa16.19■□□□□ 0.18
LINC00943-206ENST00000540250 TMEM121BQ9BXQ6 578 aaPredicted RBP16.15■□□□□ 0.18
LINC00943-206ENST00000540250 ILDR1Q86SU0 546 aaPredicted RBP16.14■□□□□ 0.17
LINC00943-206ENST00000540250 CABP2Q9NPB3 220 aa16.14■□□□□ 0.17
LINC00943-206ENST00000540250 DPY19L2Q6NUT2 758 aa16.12■□□□□ 0.17
LINC00943-206ENST00000540250 MARVELD3Q96A59 401 aa16.11■□□□□ 0.17
LINC00943-206ENST00000540250 BOLA1Q9Y3E2 137 aa15.99■□□□□ 0.15
LINC00943-206ENST00000540250 TRIM41Q8WV44 630 aa15.97■□□□□ 0.15
LINC00943-206ENST00000540250 EMP3P54852 163 aa15.96■□□□□ 0.15
LINC00943-206ENST00000540250 G3V3G9 751 aa15.95■□□□□ 0.14
LINC00943-206ENST00000540250 EFCAB3Q8N7B9 438 aa15.93■□□□□ 0.14
LINC00943-206ENST00000540250 SPNS2Q8IVW8 549 aa15.91■□□□□ 0.14
LINC00943-206ENST00000540250 POTEB3A0JP26 581 aa15.88■□□□□ 0.13
LINC00943-206ENST00000540250 MMRN1Q13201 1228 aa15.88■□□□□ 0.13
LINC00943-206ENST00000540250 POTEBQ6S5H4 581 aa15.88■□□□□ 0.13
LINC00943-206ENST00000540250 HOXB3P14651 431 aaPredicted RBP15.86■□□□□ 0.13
LINC00943-206ENST00000540250 FAM205CA6NFA0 338 aa15.85■□□□□ 0.13
LINC00943-206ENST00000540250 HS3ST6Q96QI5 342 aa15.85■□□□□ 0.13
LINC00943-206ENST00000540250 RNF25Q96BH1 459 aaPredicted RBP15.84■□□□□ 0.13
LINC00943-206ENST00000540250 RIOK3O14730 519 aaKnown RBP15.82■□□□□ 0.12
LINC00943-206ENST00000540250 KRTAP3-3Q9BYR6 98 aa15.79■□□□□ 0.12
LINC00943-206ENST00000540250 KRTAP3-2Q9BYR7 98 aa15.79■□□□□ 0.12
LINC00943-206ENST00000540250 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.78■□□□□ 0.12
LINC00943-206ENST00000540250 ZFP91Q96JP5 570 aaPredicted RBP15.78■□□□□ 0.12
LINC00943-206ENST00000540250 MICALL2Q8IY33 904 aa15.75■□□□□ 0.11
LINC00943-206ENST00000540250 ZNF710Q8N1W2 664 aa15.74■□□□□ 0.11
LINC00943-206ENST00000540250 VGFO15240 615 aaPredicted RBP15.73■□□□□ 0.11
LINC00943-206ENST00000540250 HOXB1P14653 301 aaPredicted RBP15.73■□□□□ 0.11
LINC00943-206ENST00000540250 MS4A4AQ96JQ5 239 aa15.73■□□□□ 0.11
LINC00943-206ENST00000540250 SOX12O15370 315 aa15.72■□□□□ 0.11
LINC00943-206ENST00000540250 DOK7Q18PE1 504 aa15.72■□□□□ 0.11
LINC00943-206ENST00000540250 TMEM92Q6UXU6 159 aa15.72■□□□□ 0.11
LINC00943-206ENST00000540250 PHF8Q9UPP1 1060 aa15.7■□□□□ 0.1
LINC00943-206ENST00000540250 ERBB3P21860 1342 aa15.63■□□□□ 0.09
LINC00943-206ENST00000540250 RIMBP2O15034 1052 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms