RNA–Protein interactions for RNA: ENST00000539744.5

LMNTD1-207, Transcript of lamin tail domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LMNTD1, Length 1,729 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNTD1-207ENST00000539744 ASTLQ6HA08 431 aaPredicted RBP11.97□□□□□ -0.49
LMNTD1-207ENST00000539744 ATMINO43313 823 aaPredicted RBP11.96□□□□□ -0.49
LMNTD1-207ENST00000539744 MIER1Q8N108 512 aa11.95□□□□□ -0.5
LMNTD1-207ENST00000539744 KIF12Q96FN5 646 aa11.93□□□□□ -0.5
LMNTD1-207ENST00000539744 RASEFQ8IZ41 740 aa11.91□□□□□ -0.5
LMNTD1-207ENST00000539744 POTEJP0CG39 1038 aa11.9□□□□□ -0.5
LMNTD1-207ENST00000539744 METRNQ9UJH8 293 aa11.9□□□□□ -0.5
LMNTD1-207ENST00000539744 TRPC6Q9Y210 931 aa11.89□□□□□ -0.51
LMNTD1-207ENST00000539744 ATN1P54259 1190 aaPredicted RBP11.88□□□□□ -0.51
LMNTD1-207ENST00000539744 MAP3K13O43283 966 aa11.86□□□□□ -0.51
LMNTD1-207ENST00000539744 C7P10643 843 aa11.85□□□□□ -0.51
LMNTD1-207ENST00000539744 SLC39A7Q92504 469 aa11.85□□□□□ -0.51
LMNTD1-207ENST00000539744 PLEKHG5O94827 1062 aa11.83□□□□□ -0.52
LMNTD1-207ENST00000539744 BMP2KQ9NSY1 1161 aaPredicted RBP11.83□□□□□ -0.52
LMNTD1-207ENST00000539744 PLCD3Q8N3E9 789 aa11.81□□□□□ -0.52
LMNTD1-207ENST00000539744 POTEFA5A3E0 1075 aa11.8□□□□□ -0.52
LMNTD1-207ENST00000539744 FKBP8Q14318 412 aa11.78□□□□□ -0.52
LMNTD1-207ENST00000539744 NUBP1P53384 320 aa11.77□□□□□ -0.52
LMNTD1-207ENST00000539744 TIE1P35590 1138 aa11.74□□□□□ -0.53
LMNTD1-207ENST00000539744 TTLL13PA6NNM8 815 aa11.72□□□□□ -0.53
LMNTD1-207ENST00000539744 POTEMA6NI47 508 aa11.69□□□□□ -0.54
LMNTD1-207ENST00000539744 PLSCR2Q9NRY7 297 aa11.69□□□□□ -0.54
LMNTD1-207ENST00000539744 COLQQ9Y215 455 aaPredicted RBP11.69□□□□□ -0.54
LMNTD1-207ENST00000539744 PCDHB13Q9Y5F0 798 aa11.68□□□□□ -0.54
LMNTD1-207ENST00000539744 POTEGQ6S5H5 508 aa11.66□□□□□ -0.54
LMNTD1-207ENST00000539744 MAMSTRQ6ZN01 415 aa11.66□□□□□ -0.54
LMNTD1-207ENST00000539744 ZBTB47Q9UFB7 747 aaPredicted RBP11.66□□□□□ -0.54
LMNTD1-207ENST00000539744 IFNL1Q8IU54 200 aa11.66□□□□□ -0.54
LMNTD1-207ENST00000539744 SGIP1Q9BQI5 828 aa11.66□□□□□ -0.54
LMNTD1-207ENST00000539744 LCE2DQ5TA82 110 aaPredicted RBP11.64□□□□□ -0.55
LMNTD1-207ENST00000539744 TRIM35Q9UPQ4 493 aa11.63□□□□□ -0.55
LMNTD1-207ENST00000539744 SCUBE2Q9NQ36 999 aa11.61□□□□□ -0.55
LMNTD1-207ENST00000539744 FAM212AQ96EL1 285 aa11.6□□□□□ -0.55
LMNTD1-207ENST00000539744 SEC24BO95487 1268 aa11.58□□□□□ -0.56
LMNTD1-207ENST00000539744 FAM163AQ96GL9 167 aaPredicted RBP11.57□□□□□ -0.56
LMNTD1-207ENST00000539744 IER5LQ5T953 404 aa11.55□□□□□ -0.56
LMNTD1-207ENST00000539744 TMEM106CQ9BVX2 250 aa11.55□□□□□ -0.56
LMNTD1-207ENST00000539744 DCAF8Q5TAQ9 597 aa11.53□□□□□ -0.56
LMNTD1-207ENST00000539744 PYGBP11216 843 aa11.52□□□□□ -0.56
LMNTD1-207ENST00000539744 FBXO3Q9UK99 471 aa11.49□□□□□ -0.57
LMNTD1-207ENST00000539744 PCDHB8Q9UN66 801 aa11.48□□□□□ -0.57
LMNTD1-207ENST00000539744 SLC24A1O60721 1099 aa11.47□□□□□ -0.57
LMNTD1-207ENST00000539744 IRX5P78411 483 aaPredicted RBP11.46□□□□□ -0.57
LMNTD1-207ENST00000539744 PCDH10Q9P2E7 1040 aa11.43□□□□□ -0.58
LMNTD1-207ENST00000539744 VASPP50552 380 aaPredicted RBP11.43□□□□□ -0.58
LMNTD1-207ENST00000539744 PLCG2P16885 1265 aa11.42□□□□□ -0.58
LMNTD1-207ENST00000539744 KLHL34Q8N239 644 aa11.4□□□□□ -0.58
LMNTD1-207ENST00000539744 SLAIN1Q8ND83 568 aa11.4□□□□□ -0.58
LMNTD1-207ENST00000539744 OCEL1Q9H607 264 aa11.38□□□□□ -0.59
LMNTD1-207ENST00000539744 ST18O60284 1047 aa11.33□□□□□ -0.6
LMNTD1-207ENST00000539744 GSE1Q14687 1217 aa11.33□□□□□ -0.6
LMNTD1-207ENST00000539744 CHRM1P11229 460 aaPredicted RBP11.29□□□□□ -0.6
LMNTD1-207ENST00000539744 PDCD7Q8N8D1 485 aaKnown RBP11.29□□□□□ -0.6
LMNTD1-207ENST00000539744 ZNF467Q7Z7K2 595 aaPredicted RBP11.28□□□□□ -0.6
LMNTD1-207ENST00000539744 IFNLR1Q8IU57 520 aaPredicted RBP11.28□□□□□ -0.6
LMNTD1-207ENST00000539744 CDAN1Q8IWY9 1227 aa11.27□□□□□ -0.61
LMNTD1-207ENST00000539744 PSEN1P49768 467 aa11.24□□□□□ -0.61
LMNTD1-207ENST00000539744 ABCC9O60706 1549 aa11.23□□□□□ -0.61
LMNTD1-207ENST00000539744 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.23□□□□□ -0.61
LMNTD1-207ENST00000539744 MKRN3Q13064 507 aaKnown RBP11.21□□□□□ -0.62
LMNTD1-207ENST00000539744 SPOCK2Q92563 424 aa11.18□□□□□ -0.62
LMNTD1-207ENST00000539744 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.18□□□□□ -0.62
LMNTD1-207ENST00000539744 GOLGA2Q08379 1002 aa11.18□□□□□ -0.62
LMNTD1-207ENST00000539744 ILDR1Q86SU0 546 aaPredicted RBP11.17□□□□□ -0.62
LMNTD1-207ENST00000539744 CIZ1Q9ULV3 898 aaPredicted RBP11.17□□□□□ -0.62
LMNTD1-207ENST00000539744 DPY19L2Q6NUT2 758 aa11.16□□□□□ -0.62
LMNTD1-207ENST00000539744 PDAP1Q13442 181 aaKnown RBP11.15□□□□□ -0.62
LMNTD1-207ENST00000539744 MARVELD3Q96A59 401 aa11.15□□□□□ -0.63
LMNTD1-207ENST00000539744 L3MBTL3Q96JM7 780 aaPredicted RBP11.13□□□□□ -0.63
LMNTD1-207ENST00000539744 SNPHO15079 494 aa11.12□□□□□ -0.63
LMNTD1-207ENST00000539744 TMEM121BQ9BXQ6 578 aaPredicted RBP11.12□□□□□ -0.63
LMNTD1-207ENST00000539744 CCDC180Q9P1Z9 1646 aa11.12□□□□□ -0.63
LMNTD1-207ENST00000539744 C3orf67Q6ZVT6 689 aa11.12□□□□□ -0.63
LMNTD1-207ENST00000539744 CABP2Q9NPB3 220 aa11.11□□□□□ -0.63
LMNTD1-207ENST00000539744 POTEB3A0JP26 581 aa11.04□□□□□ -0.64
LMNTD1-207ENST00000539744 POTEBQ6S5H4 581 aa11.04□□□□□ -0.64
LMNTD1-207ENST00000539744 SPNS2Q8IVW8 549 aa11.02□□□□□ -0.65
LMNTD1-207ENST00000539744 RTN4Q9NQC3 1192 aaKnown RBP11.01□□□□□ -0.65
LMNTD1-207ENST00000539744 BOLA1Q9Y3E2 137 aa11.01□□□□□ -0.65
LMNTD1-207ENST00000539744 MMRN1Q13201 1228 aa10.99□□□□□ -0.65
LMNTD1-207ENST00000539744 EFCAB3Q8N7B9 438 aa10.99□□□□□ -0.65
LMNTD1-207ENST00000539744 EMP3P54852 163 aa10.98□□□□□ -0.65
LMNTD1-207ENST00000539744 HOXB3P14651 431 aaPredicted RBP10.97□□□□□ -0.65
LMNTD1-207ENST00000539744 HS3ST6Q96QI5 342 aa10.95□□□□□ -0.66
LMNTD1-207ENST00000539744 FAM205CA6NFA0 338 aa10.95□□□□□ -0.66
LMNTD1-207ENST00000539744 RNF25Q96BH1 459 aaPredicted RBP10.94□□□□□ -0.66
LMNTD1-207ENST00000539744 KRTAP3-3Q9BYR6 98 aa10.94□□□□□ -0.66
LMNTD1-207ENST00000539744 KRTAP3-2Q9BYR7 98 aa10.94□□□□□ -0.66
LMNTD1-207ENST00000539744 TRIM41Q8WV44 630 aa10.92□□□□□ -0.66
LMNTD1-207ENST00000539744 G3V3G9 751 aa10.91□□□□□ -0.66
LMNTD1-207ENST00000539744 TMEM92Q6UXU6 159 aa10.88□□□□□ -0.67
LMNTD1-207ENST00000539744 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.87□□□□□ -0.67
LMNTD1-207ENST00000539744 RIOK3O14730 519 aaKnown RBP10.87□□□□□ -0.67
LMNTD1-207ENST00000539744 ZFP91Q96JP5 570 aaPredicted RBP10.87□□□□□ -0.67
LMNTD1-207ENST00000539744 MS4A4AQ96JQ5 239 aa10.87□□□□□ -0.67
LMNTD1-207ENST00000539744 HOXB1P14653 301 aaPredicted RBP10.86□□□□□ -0.67
LMNTD1-207ENST00000539744 AMER1Q5JTC6 1135 aaPredicted RBP10.85□□□□□ -0.67
LMNTD1-207ENST00000539744 MICALL2Q8IY33 904 aa10.85□□□□□ -0.67
LMNTD1-207ENST00000539744 PHF8Q9UPP1 1060 aa10.83□□□□□ -0.68
LMNTD1-207ENST00000539744 ZNF710Q8N1W2 664 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms