RNA–Protein interactions for RNA: ENST00000539512.1

TRAV11-201, Transcript of T cell receptor alpha variable 11 (pseudogene), humanhuman

BASIC

Gene TRAV11, Length 339 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV11-201ENST00000539512 TAOK2Q9UL54 1235 aa16.38■□□□□ 0.21
TRAV11-201ENST00000539512 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.36■□□□□ 0.21
TRAV11-201ENST00000539512 PLCB2Q00722 1185 aa16.32■□□□□ 0.2
TRAV11-201ENST00000539512 PIP4P2Q8N4L2 257 aa16.31■□□□□ 0.2
TRAV11-201ENST00000539512 TSPYL2Q9H2G4 693 aaPredicted RBP16.31■□□□□ 0.2
TRAV11-201ENST00000539512 CHGAP10645 457 aaKnown RBP16.3■□□□□ 0.2
TRAV11-201ENST00000539512 BBXQ8WY36 941 aaPredicted RBP16.3■□□□□ 0.2
TRAV11-201ENST00000539512 PAK3O75914 559 aaPredicted RBP16.29■□□□□ 0.2
TRAV11-201ENST00000539512 RIOK3O14730 519 aaKnown RBP16.28■□□□□ 0.2
TRAV11-201ENST00000539512 PYGBP11216 843 aa16.26■□□□□ 0.19
TRAV11-201ENST00000539512 CHRM1P11229 460 aaPredicted RBP16.25■□□□□ 0.19
TRAV11-201ENST00000539512 RNF25Q96BH1 459 aaPredicted RBP16.21■□□□□ 0.19
TRAV11-201ENST00000539512 VGFO15240 615 aaPredicted RBP16.19■□□□□ 0.18
TRAV11-201ENST00000539512 HAP1P54257 671 aaPredicted RBP16.17■□□□□ 0.18
TRAV11-201ENST00000539512 HS6ST3Q8IZP7 471 aa16.15■□□□□ 0.18
TRAV11-201ENST00000539512 PAXIP1Q6ZW49 1069 aaPredicted RBP16.14■□□□□ 0.17
TRAV11-201ENST00000539512 CFAP44Q96MT7 982 aa16.13■□□□□ 0.17
TRAV11-201ENST00000539512 STK25O00506 426 aa16.11■□□□□ 0.17
TRAV11-201ENST00000539512 ZNF467Q7Z7K2 595 aaPredicted RBP16.11■□□□□ 0.17
TRAV11-201ENST00000539512 SPRYD3Q8NCJ5 442 aa16.09■□□□□ 0.17
TRAV11-201ENST00000539512 CCDC61Q9Y6R9 512 aa16.06■□□□□ 0.16
TRAV11-201ENST00000539512 CD44P16070 742 aaKnown RBP16.04■□□□□ 0.16
TRAV11-201ENST00000539512 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.02■□□□□ 0.16
TRAV11-201ENST00000539512 ZFP91Q96JP5 570 aaPredicted RBP16.02■□□□□ 0.16
TRAV11-201ENST00000539512 ZRANB1Q9UGI0 708 aa16.02■□□□□ 0.16
TRAV11-201ENST00000539512 STK24Q9Y6E0 443 aa16.02■□□□□ 0.16
TRAV11-201ENST00000539512 SGIP1Q9BQI5 828 aa16.01■□□□□ 0.15
TRAV11-201ENST00000539512 BCL11BQ9C0K0 894 aaPredicted RBP15.99■□□□□ 0.15
TRAV11-201ENST00000539512 PDAP1Q13442 181 aaKnown RBP15.97■□□□□ 0.15
TRAV11-201ENST00000539512 PCDHB13Q9Y5F0 798 aa15.97■□□□□ 0.15
TRAV11-201ENST00000539512 ZNF579Q8NAF0 562 aaKnown RBP15.96■□□□□ 0.15
TRAV11-201ENST00000539512 PCDHB8Q9UN66 801 aa15.95■□□□□ 0.14
TRAV11-201ENST00000539512 DNAJC5Q9H3Z4 198 aa15.94■□□□□ 0.14
TRAV11-201ENST00000539512 RYDENQ9NUL5 291 aaKnown RBP15.9■□□□□ 0.14
TRAV11-201ENST00000539512 MAP3K13O43283 966 aa15.89■□□□□ 0.13
TRAV11-201ENST00000539512 KIF12Q96FN5 646 aa15.89■□□□□ 0.13
TRAV11-201ENST00000539512 PSEN1P49768 467 aa15.88■□□□□ 0.13
TRAV11-201ENST00000539512 VSIG10Q8N0Z9 540 aa15.86■□□□□ 0.13
TRAV11-201ENST00000539512 IFNL1Q8IU54 200 aa15.85■□□□□ 0.13
TRAV11-201ENST00000539512 PHF12Q96QT6 1004 aa15.84■□□□□ 0.13
TRAV11-201ENST00000539512 C19orf67A6NJJ6 358 aa15.82■□□□□ 0.12
TRAV11-201ENST00000539512 NKX1-1Q15270 411 aaPredicted RBP15.82■□□□□ 0.12
TRAV11-201ENST00000539512 HAX1O00165 279 aa15.76■□□□□ 0.11
TRAV11-201ENST00000539512 TSHZ2Q9NRE2 1034 aa15.76■□□□□ 0.11
TRAV11-201ENST00000539512 GTPBP6O43824 516 aaPredicted RBP15.75■□□□□ 0.11
TRAV11-201ENST00000539512 GOLGA2Q08379 1002 aa15.7■□□□□ 0.1
TRAV11-201ENST00000539512 CABP2Q9NPB3 220 aa15.69■□□□□ 0.1
TRAV11-201ENST00000539512 MS4A3Q96HJ5 214 aa15.67■□□□□ 0.1
TRAV11-201ENST00000539512 TMEM106CQ9BVX2 250 aa15.64■□□□□ 0.09
TRAV11-201ENST00000539512 EFCAB3Q8N7B9 438 aa15.62■□□□□ 0.09
TRAV11-201ENST00000539512 KDM2AQ9Y2K7 1162 aa15.61■□□□□ 0.09
TRAV11-201ENST00000539512 SOX12O15370 315 aa15.6■□□□□ 0.09
TRAV11-201ENST00000539512 CLCN6P51797 869 aa15.6■□□□□ 0.09
TRAV11-201ENST00000539512 NLRP6P59044 892 aa15.6■□□□□ 0.09
TRAV11-201ENST00000539512 MFRPQ9BY79 579 aa15.56■□□□□ 0.08
TRAV11-201ENST00000539512 MKRN3Q13064 507 aaKnown RBP15.55■□□□□ 0.08
TRAV11-201ENST00000539512 TIE1P35590 1138 aa15.54■□□□□ 0.08
TRAV11-201ENST00000539512 BCANQ96GW7 911 aa15.52■□□□□ 0.08
TRAV11-201ENST00000539512 PHF8Q9UPP1 1060 aa15.5■□□□□ 0.07
TRAV11-201ENST00000539512 TRPC6Q9Y210 931 aa15.5■□□□□ 0.07
TRAV11-201ENST00000539512 GALR2O43603 387 aaPredicted RBP15.48■□□□□ 0.07
TRAV11-201ENST00000539512 TTLL13PA6NNM8 815 aa15.46■□□□□ 0.07
TRAV11-201ENST00000539512 EVX2Q03828 476 aa15.45■□□□□ 0.06
TRAV11-201ENST00000539512 POTEHQ6S545 545 aa15.44■□□□□ 0.06
TRAV11-201ENST00000539512 BMP2KQ9NSY1 1161 aaPredicted RBP15.44■□□□□ 0.06
TRAV11-201ENST00000539512 FBXO22Q8NEZ5 403 aa15.43■□□□□ 0.06
TRAV11-201ENST00000539512 WDR70Q9NW82 654 aa15.4■□□□□ 0.06
TRAV11-201ENST00000539512 TRIM35Q9UPQ4 493 aa15.4■□□□□ 0.06
TRAV11-201ENST00000539512 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.37■□□□□ 0.05
TRAV11-201ENST00000539512 PPP1R37O75864 691 aa15.35■□□□□ 0.05
TRAV11-201ENST00000539512 NBR1Q14596 966 aa15.34■□□□□ 0.05
TRAV11-201ENST00000539512 MS4A4AQ96JQ5 239 aa15.3■□□□□ 0.04
TRAV11-201ENST00000539512 GABBR2O75899 941 aa15.29■□□□□ 0.04
TRAV11-201ENST00000539512 CADPS2Q86UW7 1296 aa15.29■□□□□ 0.04
TRAV11-201ENST00000539512 DCBLD2Q96PD2 775 aa15.29■□□□□ 0.04
TRAV11-201ENST00000539512 P3H3Q8IVL6 736 aa15.28■□□□□ 0.04
TRAV11-201ENST00000539512 ATN1P54259 1190 aaPredicted RBP15.27■□□□□ 0.04
TRAV11-201ENST00000539512 ATMINO43313 823 aaPredicted RBP15.26■□□□□ 0.03
TRAV11-201ENST00000539512 ASTLQ6HA08 431 aaPredicted RBP15.24■□□□□ 0.03
TRAV11-201ENST00000539512 IER5LQ5T953 404 aa15.23■□□□□ 0.03
TRAV11-201ENST00000539512 G3V3G9 751 aa15.22■□□□□ 0.03
TRAV11-201ENST00000539512 PLCG2P16885 1265 aa15.2■□□□□ 0.02
TRAV11-201ENST00000539512 PDE4AP27815 886 aa15.19■□□□□ 0.02
TRAV11-201ENST00000539512 OCEL1Q9H607 264 aa15.17■□□□□ 0.02
TRAV11-201ENST00000539512 SEC24BO95487 1268 aa15.16■□□□□ 0.02
TRAV11-201ENST00000539512 ILDR1Q86SU0 546 aaPredicted RBP15.16■□□□□ 0.02
TRAV11-201ENST00000539512 LARP6Q9BRS8 491 aaKnown RBP15.14■□□□□ 0.01
TRAV11-201ENST00000539512 IRX5P78411 483 aaPredicted RBP15.11■□□□□ 0.01
TRAV11-201ENST00000539512 DPY19L2Q6NUT2 758 aa15.1■□□□□ 0.01
TRAV11-201ENST00000539512 PDCD7Q8N8D1 485 aaKnown RBP15.09■□□□□ 0.01
TRAV11-201ENST00000539512 SP7Q8TDD2 431 aaPredicted RBP15.09■□□□□ 0.01
TRAV11-201ENST00000539512 SLC39A7Q92504 469 aa15.09■□□□□ 0.01
TRAV11-201ENST00000539512 E2F4Q16254 413 aa15.08■□□□□ 0
TRAV11-201ENST00000539512 DDX27Q96GQ7 796 aaKnown RBP15.08■□□□□ 0
TRAV11-201ENST00000539512 MICALL2Q8IY33 904 aa15.07■□□□□ 0
TRAV11-201ENST00000539512 KCNV2Q8TDN2 545 aa15.07■□□□□ 0
TRAV11-201ENST00000539512 BOLA1Q9Y3E2 137 aa15.07■□□□□ 0
TRAV11-201ENST00000539512 NCKAP5LQ9HCH0 1330 aa15.07■□□□□ 0
TRAV11-201ENST00000539512 L3MBTL3Q96JM7 780 aaPredicted RBP15.06■□□□□ 0
TRAV11-201ENST00000539512 TMC2Q8TDI7 906 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 115.9 ms