RNA–Protein interactions for RNA: ENST00000539019.1

SSPN-206, Transcript of sarcospan, humanhuman

TSL 1 (best)

Gene SSPN, Length 1,356 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPN-206ENST00000539019 CCDC61Q9Y6R9 512 aa14.56□□□□□ -0.08
SSPN-206ENST00000539019 IFNLR1Q8IU57 520 aaPredicted RBP14.53□□□□□ -0.08
SSPN-206ENST00000539019 GALR2O43603 387 aaPredicted RBP14.51□□□□□ -0.09
SSPN-206ENST00000539019 FAM212AQ96EL1 285 aa14.47□□□□□ -0.09
SSPN-206ENST00000539019 DCAF8Q5TAQ9 597 aa14.46□□□□□ -0.1
SSPN-206ENST00000539019 KIF12Q96FN5 646 aa14.46□□□□□ -0.1
SSPN-206ENST00000539019 POTEIP0CG38 1075 aa14.44□□□□□ -0.1
SSPN-206ENST00000539019 MS4A3Q96HJ5 214 aa14.43□□□□□ -0.1
SSPN-206ENST00000539019 DCBLD2Q96PD2 775 aa14.41□□□□□ -0.1
SSPN-206ENST00000539019 MAP3K13O43283 966 aa14.4□□□□□ -0.1
SSPN-206ENST00000539019 SPOCK2Q92563 424 aa14.4□□□□□ -0.1
SSPN-206ENST00000539019 GSE1Q14687 1217 aa14.34□□□□□ -0.11
SSPN-206ENST00000539019 PYGBP11216 843 aa14.31□□□□□ -0.12
SSPN-206ENST00000539019 PCDHB13Q9Y5F0 798 aa14.3□□□□□ -0.12
SSPN-206ENST00000539019 SGIP1Q9BQI5 828 aa14.29□□□□□ -0.12
SSPN-206ENST00000539019 TRPC6Q9Y210 931 aa14.28□□□□□ -0.12
SSPN-206ENST00000539019 CIZ1Q9ULV3 898 aaPredicted RBP14.26□□□□□ -0.13
SSPN-206ENST00000539019 IFNL1Q8IU54 200 aa14.24□□□□□ -0.13
SSPN-206ENST00000539019 ATMINO43313 823 aaPredicted RBP14.22□□□□□ -0.13
SSPN-206ENST00000539019 ASTLQ6HA08 431 aaPredicted RBP14.22□□□□□ -0.13
SSPN-206ENST00000539019 PELP1Q8IZL8 1130 aaKnown RBP14.22□□□□□ -0.13
SSPN-206ENST00000539019 CHRM1P11229 460 aaPredicted RBP14.19□□□□□ -0.14
SSPN-206ENST00000539019 BMP2KQ9NSY1 1161 aaPredicted RBP14.19□□□□□ -0.14
SSPN-206ENST00000539019 TIE1P35590 1138 aa14.18□□□□□ -0.14
SSPN-206ENST00000539019 ATN1P54259 1190 aaPredicted RBP14.17□□□□□ -0.14
SSPN-206ENST00000539019 PCDHB8Q9UN66 801 aa14.17□□□□□ -0.14
SSPN-206ENST00000539019 TTLL13PA6NNM8 815 aa14.12□□□□□ -0.15
SSPN-206ENST00000539019 LHX8Q68G74 356 aa14.09□□□□□ -0.15
SSPN-206ENST00000539019 ZNF467Q7Z7K2 595 aaPredicted RBP14.08□□□□□ -0.16
SSPN-206ENST00000539019 TMEM106CQ9BVX2 250 aa14.08□□□□□ -0.16
SSPN-206ENST00000539019 SLC39A7Q92504 469 aa14.07□□□□□ -0.16
SSPN-206ENST00000539019 C7P10643 843 aa14.05□□□□□ -0.16
SSPN-206ENST00000539019 METRNQ9UJH8 293 aa14.05□□□□□ -0.16
SSPN-206ENST00000539019 TRIM41Q8WV44 630 aa14.04□□□□□ -0.16
SSPN-206ENST00000539019 TRIM35Q9UPQ4 493 aa14.03□□□□□ -0.16
SSPN-206ENST00000539019 POTEB2H3BUK9 544 aa13.98□□□□□ -0.17
SSPN-206ENST00000539019 PSEN1P49768 467 aa13.96□□□□□ -0.17
SSPN-206ENST00000539019 POTEFA5A3E0 1075 aa13.95□□□□□ -0.18
SSPN-206ENST00000539019 PDAP1Q13442 181 aaKnown RBP13.93□□□□□ -0.18
SSPN-206ENST00000539019 IER5LQ5T953 404 aa13.92□□□□□ -0.18
SSPN-206ENST00000539019 COLQQ9Y215 455 aaPredicted RBP13.91□□□□□ -0.18
SSPN-206ENST00000539019 PKD2Q13563 968 aa13.9□□□□□ -0.18
SSPN-206ENST00000539019 RNF25Q96BH1 459 aaPredicted RBP13.9□□□□□ -0.18
SSPN-206ENST00000539019 SEC24BO95487 1268 aa13.89□□□□□ -0.19
SSPN-206ENST00000539019 ECM2O94769 699 aaPredicted RBP13.87□□□□□ -0.19
SSPN-206ENST00000539019 RIOK3O14730 519 aaKnown RBP13.86□□□□□ -0.19
SSPN-206ENST00000539019 POTEJP0CG39 1038 aa13.85□□□□□ -0.19
SSPN-206ENST00000539019 IRX5P78411 483 aaPredicted RBP13.83□□□□□ -0.2
SSPN-206ENST00000539019 GOLGA2Q08379 1002 aa13.83□□□□□ -0.2
SSPN-206ENST00000539019 OTUD5Q96G74 571 aa13.82□□□□□ -0.2
SSPN-206ENST00000539019 MKRN3Q13064 507 aaKnown RBP13.8□□□□□ -0.2
SSPN-206ENST00000539019 CABP2Q9NPB3 220 aa13.8□□□□□ -0.2
SSPN-206ENST00000539019 PLCG2P16885 1265 aa13.79□□□□□ -0.2
SSPN-206ENST00000539019 VGFO15240 615 aaPredicted RBP13.78□□□□□ -0.2
SSPN-206ENST00000539019 OCEL1Q9H607 264 aa13.78□□□□□ -0.2
SSPN-206ENST00000539019 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.77□□□□□ -0.21
SSPN-206ENST00000539019 ZFP91Q96JP5 570 aaPredicted RBP13.77□□□□□ -0.21
SSPN-206ENST00000539019 RGL2O15211 777 aa13.76□□□□□ -0.21
SSPN-206ENST00000539019 MAMSTRQ6ZN01 415 aa13.72□□□□□ -0.21
SSPN-206ENST00000539019 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.71□□□□□ -0.21
SSPN-206ENST00000539019 EFCAB3Q8N7B9 438 aa13.7□□□□□ -0.22
SSPN-206ENST00000539019 PDCD7Q8N8D1 485 aaKnown RBP13.7□□□□□ -0.22
SSPN-206ENST00000539019 TAOK2Q9UL54 1235 aa13.7□□□□□ -0.22
SSPN-206ENST00000539019 SCUBE2Q9NQ36 999 aa13.69□□□□□ -0.22
SSPN-206ENST00000539019 ILDR1Q86SU0 546 aaPredicted RBP13.66□□□□□ -0.22
SSPN-206ENST00000539019 BCL11BQ9C0K0 894 aaPredicted RBP13.64□□□□□ -0.23
SSPN-206ENST00000539019 DPY19L2Q6NUT2 758 aa13.62□□□□□ -0.23
SSPN-206ENST00000539019 STK24Q9Y6E0 443 aa13.62□□□□□ -0.23
SSPN-206ENST00000539019 STK25O00506 426 aa13.61□□□□□ -0.23
SSPN-206ENST00000539019 SOX12O15370 315 aa13.58□□□□□ -0.24
SSPN-206ENST00000539019 L3MBTL3Q96JM7 780 aaPredicted RBP13.58□□□□□ -0.24
SSPN-206ENST00000539019 PHF8Q9UPP1 1060 aa13.54□□□□□ -0.24
SSPN-206ENST00000539019 SLAIN1Q8ND83 568 aa13.52□□□□□ -0.25
SSPN-206ENST00000539019 MS4A4AQ96JQ5 239 aa13.5□□□□□ -0.25
SSPN-206ENST00000539019 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.5□□□□□ -0.25
SSPN-206ENST00000539019 BOLA1Q9Y3E2 137 aa13.49□□□□□ -0.25
SSPN-206ENST00000539019 NLRP6P59044 892 aa13.46□□□□□ -0.25
SSPN-206ENST00000539019 C3orf67Q6ZVT6 689 aa13.46□□□□□ -0.25
SSPN-206ENST00000539019 MFRPQ9BY79 579 aa13.46□□□□□ -0.25
SSPN-206ENST00000539019 G3V3G9 751 aa13.45□□□□□ -0.26
SSPN-206ENST00000539019 FBXO22Q8NEZ5 403 aa13.45□□□□□ -0.26
SSPN-206ENST00000539019 CHGAP10645 457 aaKnown RBP13.44□□□□□ -0.26
SSPN-206ENST00000539019 HS6ST3Q8IZP7 471 aa13.44□□□□□ -0.26
SSPN-206ENST00000539019 TMEM121BQ9BXQ6 578 aaPredicted RBP13.42□□□□□ -0.26
SSPN-206ENST00000539019 FAM163AQ96GL9 167 aaPredicted RBP13.39□□□□□ -0.27
SSPN-206ENST00000539019 MICALL2Q8IY33 904 aa13.37□□□□□ -0.27
SSPN-206ENST00000539019 DCAF8L2P0C7V8 631 aa13.34□□□□□ -0.27
SSPN-206ENST00000539019 LCE2DQ5TA82 110 aaPredicted RBP13.33□□□□□ -0.27
SSPN-206ENST00000539019 AMER1Q5JTC6 1135 aaPredicted RBP13.32□□□□□ -0.28
SSPN-206ENST00000539019 RTN4Q9NQC3 1192 aaKnown RBP13.31□□□□□ -0.28
SSPN-206ENST00000539019 DNAJC5Q9H3Z4 198 aa13.3□□□□□ -0.28
SSPN-206ENST00000539019 PPP1R37O75864 691 aa13.28□□□□□ -0.28
SSPN-206ENST00000539019 NKX1-1Q15270 411 aaPredicted RBP13.28□□□□□ -0.28
SSPN-206ENST00000539019 SNPHO15079 494 aa13.27□□□□□ -0.29
SSPN-206ENST00000539019 TMEM92Q6UXU6 159 aa13.27□□□□□ -0.29
SSPN-206ENST00000539019 ST18O60284 1047 aa13.25□□□□□ -0.29
SSPN-206ENST00000539019 POTEMA6NI47 508 aa13.23□□□□□ -0.29
SSPN-206ENST00000539019 POTEGQ6S5H5 508 aa13.22□□□□□ -0.29
SSPN-206ENST00000539019 HOXB3P14651 431 aaPredicted RBP13.16□□□□□ -0.3
SSPN-206ENST00000539019 RYDENQ9NUL5 291 aaKnown RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms