RNA–Protein interactions for RNA: ENST00000539018.5

TUBD1-206, Transcript of tubulin delta 1, humanhuman

TSL 2 BASIC

Gene TUBD1, Length 1,027 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-206ENST00000539018 TSPYL2Q9H2G4 693 aaPredicted RBP16.49■□□□□ 0.23
TUBD1-206ENST00000539018 PAK3O75914 559 aaPredicted RBP16.45■□□□□ 0.22
TUBD1-206ENST00000539018 DCAF8L2P0C7V8 631 aa16.4■□□□□ 0.22
TUBD1-206ENST00000539018 RGL2O15211 777 aa16.38■□□□□ 0.21
TUBD1-206ENST00000539018 CD44P16070 742 aaKnown RBP16.38■□□□□ 0.21
TUBD1-206ENST00000539018 PYGBP11216 843 aa16.36■□□□□ 0.21
TUBD1-206ENST00000539018 CHRM1P11229 460 aaPredicted RBP16.35■□□□□ 0.21
TUBD1-206ENST00000539018 CCDC61Q9Y6R9 512 aa16.33■□□□□ 0.2
TUBD1-206ENST00000539018 ZRANB1Q9UGI0 708 aa16.32■□□□□ 0.2
TUBD1-206ENST00000539018 C19orf67A6NJJ6 358 aa16.31■□□□□ 0.2
TUBD1-206ENST00000539018 HAX1O00165 279 aa16.29■□□□□ 0.2
TUBD1-206ENST00000539018 RNF25Q96BH1 459 aaPredicted RBP16.26■□□□□ 0.19
TUBD1-206ENST00000539018 RIOK3O14730 519 aaKnown RBP16.23■□□□□ 0.19
TUBD1-206ENST00000539018 TAOK2Q9UL54 1235 aa16.2■□□□□ 0.18
TUBD1-206ENST00000539018 KIF12Q96FN5 646 aa16.17■□□□□ 0.18
TUBD1-206ENST00000539018 ZNF467Q7Z7K2 595 aaPredicted RBP16.16■□□□□ 0.18
TUBD1-206ENST00000539018 ZNF579Q8NAF0 562 aaKnown RBP16.16■□□□□ 0.18
TUBD1-206ENST00000539018 PHF12Q96QT6 1004 aa16.16■□□□□ 0.18
TUBD1-206ENST00000539018 VGFO15240 615 aaPredicted RBP16.14■□□□□ 0.17
TUBD1-206ENST00000539018 MAP3K13O43283 966 aa16.13■□□□□ 0.17
TUBD1-206ENST00000539018 SGIP1Q9BQI5 828 aa16.13■□□□□ 0.17
TUBD1-206ENST00000539018 PCDHB13Q9Y5F0 798 aa16.13■□□□□ 0.17
TUBD1-206ENST00000539018 CHGAP10645 457 aaKnown RBP16.1■□□□□ 0.17
TUBD1-206ENST00000539018 PCDHB8Q9UN66 801 aa16.09■□□□□ 0.17
TUBD1-206ENST00000539018 EVX2Q03828 476 aa16.07■□□□□ 0.16
TUBD1-206ENST00000539018 IFNL1Q8IU54 200 aa16.06■□□□□ 0.16
TUBD1-206ENST00000539018 HS6ST3Q8IZP7 471 aa16.04■□□□□ 0.16
TUBD1-206ENST00000539018 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.03■□□□□ 0.16
TUBD1-206ENST00000539018 ZFP91Q96JP5 570 aaPredicted RBP16.03■□□□□ 0.16
TUBD1-206ENST00000539018 PDAP1Q13442 181 aaKnown RBP16.02■□□□□ 0.16
TUBD1-206ENST00000539018 STK25O00506 426 aa16.01■□□□□ 0.15
TUBD1-206ENST00000539018 BBXQ8WY36 941 aaPredicted RBP15.99■□□□□ 0.15
TUBD1-206ENST00000539018 MS4A3Q96HJ5 214 aa15.99■□□□□ 0.15
TUBD1-206ENST00000539018 PSEN1P49768 467 aa15.97■□□□□ 0.15
TUBD1-206ENST00000539018 BCL11BQ9C0K0 894 aaPredicted RBP15.96■□□□□ 0.15
TUBD1-206ENST00000539018 CLCN6P51797 869 aa15.95■□□□□ 0.14
TUBD1-206ENST00000539018 STK24Q9Y6E0 443 aa15.95■□□□□ 0.14
TUBD1-206ENST00000539018 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.94■□□□□ 0.14
TUBD1-206ENST00000539018 SP7Q8TDD2 431 aaPredicted RBP15.91■□□□□ 0.14
TUBD1-206ENST00000539018 DNAJC5Q9H3Z4 198 aa15.89■□□□□ 0.13
TUBD1-206ENST00000539018 GALR2O43603 387 aaPredicted RBP15.88■□□□□ 0.13
TUBD1-206ENST00000539018 PLCB2Q00722 1185 aa15.85■□□□□ 0.13
TUBD1-206ENST00000539018 TRPC6Q9Y210 931 aa15.85■□□□□ 0.13
TUBD1-206ENST00000539018 TMEM106CQ9BVX2 250 aa15.82■□□□□ 0.12
TUBD1-206ENST00000539018 TIE1P35590 1138 aa15.81■□□□□ 0.12
TUBD1-206ENST00000539018 GABBR2O75899 941 aa15.8■□□□□ 0.12
TUBD1-206ENST00000539018 PAXIP1Q6ZW49 1069 aaPredicted RBP15.79■□□□□ 0.12
TUBD1-206ENST00000539018 NKX1-1Q15270 411 aaPredicted RBP15.78■□□□□ 0.12
TUBD1-206ENST00000539018 CABP2Q9NPB3 220 aa15.78■□□□□ 0.12
TUBD1-206ENST00000539018 SPRYD3Q8NCJ5 442 aa15.77■□□□□ 0.12
TUBD1-206ENST00000539018 CFAP44Q96MT7 982 aa15.77■□□□□ 0.12
TUBD1-206ENST00000539018 TTLL13PA6NNM8 815 aa15.74■□□□□ 0.11
TUBD1-206ENST00000539018 BMP2KQ9NSY1 1161 aaPredicted RBP15.74■□□□□ 0.11
TUBD1-206ENST00000539018 SLC24A1O60721 1099 aa15.73■□□□□ 0.11
TUBD1-206ENST00000539018 GOLGA2Q08379 1002 aa15.72■□□□□ 0.11
TUBD1-206ENST00000539018 EFCAB3Q8N7B9 438 aa15.71■□□□□ 0.11
TUBD1-206ENST00000539018 RYDENQ9NUL5 291 aaKnown RBP15.69■□□□□ 0.1
TUBD1-206ENST00000539018 GTPBP6O43824 516 aaPredicted RBP15.66■□□□□ 0.1
TUBD1-206ENST00000539018 TRIM35Q9UPQ4 493 aa15.65■□□□□ 0.1
TUBD1-206ENST00000539018 SOX12O15370 315 aa15.64■□□□□ 0.09
TUBD1-206ENST00000539018 MKRN3Q13064 507 aaKnown RBP15.64■□□□□ 0.09
TUBD1-206ENST00000539018 ATMINO43313 823 aaPredicted RBP15.63■□□□□ 0.09
TUBD1-206ENST00000539018 HAP1P54257 671 aaPredicted RBP15.63■□□□□ 0.09
TUBD1-206ENST00000539018 DCBLD2Q96PD2 775 aa15.63■□□□□ 0.09
TUBD1-206ENST00000539018 ASTLQ6HA08 431 aaPredicted RBP15.62■□□□□ 0.09
TUBD1-206ENST00000539018 MFRPQ9BY79 579 aa15.62■□□□□ 0.09
TUBD1-206ENST00000539018 ATN1P54259 1190 aaPredicted RBP15.61■□□□□ 0.09
TUBD1-206ENST00000539018 NLRP6P59044 892 aa15.59■□□□□ 0.09
TUBD1-206ENST00000539018 PHF8Q9UPP1 1060 aa15.59■□□□□ 0.09
TUBD1-206ENST00000539018 FBXO22Q8NEZ5 403 aa15.54■□□□□ 0.08
TUBD1-206ENST00000539018 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.5■□□□□ 0.077e-6■■□□□ 12.8
TUBD1-206ENST00000539018 IER5LQ5T953 404 aa15.49■□□□□ 0.07
TUBD1-206ENST00000539018 TSHZ2Q9NRE2 1034 aa15.47■□□□□ 0.07
TUBD1-206ENST00000539018 MS4A4AQ96JQ5 239 aa15.46■□□□□ 0.07
TUBD1-206ENST00000539018 POTEIP0CG38 1075 aa15.45■□□□□ 0.06
TUBD1-206ENST00000539018 PELP1Q8IZL8 1130 aaKnown RBP15.45■□□□□ 0.06
TUBD1-206ENST00000539018 ILDR1Q86SU0 546 aaPredicted RBP15.44■□□□□ 0.06
TUBD1-206ENST00000539018 SLC39A7Q92504 469 aa15.42■□□□□ 0.06
TUBD1-206ENST00000539018 PPP1R37O75864 691 aa15.41■□□□□ 0.06
TUBD1-206ENST00000539018 IRX5P78411 483 aaPredicted RBP15.41■□□□□ 0.06
TUBD1-206ENST00000539018 OCEL1Q9H607 264 aa15.39■□□□□ 0.05
TUBD1-206ENST00000539018 PLCG2P16885 1265 aa15.38■□□□□ 0.05
TUBD1-206ENST00000539018 VSIG10Q8N0Z9 540 aa15.38■□□□□ 0.05
TUBD1-206ENST00000539018 CCDC180Q9P1Z9 1646 aa15.37■□□□□ 0.05
TUBD1-206ENST00000539018 C7P10643 843 aa15.37■□□□□ 0.05
TUBD1-206ENST00000539018 SEC24BO95487 1268 aa15.36■□□□□ 0.05
TUBD1-206ENST00000539018 PDCD7Q8N8D1 485 aaKnown RBP15.36■□□□□ 0.05
TUBD1-206ENST00000539018 METRNQ9UJH8 293 aa15.34■□□□□ 0.05
TUBD1-206ENST00000539018 DPY19L2Q6NUT2 758 aa15.32■□□□□ 0.04
TUBD1-206ENST00000539018 COLQQ9Y215 455 aaPredicted RBP15.3■□□□□ 0.04
TUBD1-206ENST00000539018 KDM2AQ9Y2K7 1162 aa15.27■□□□□ 0.04
TUBD1-206ENST00000539018 POTEFA5A3E0 1075 aa15.25■□□□□ 0.03
TUBD1-206ENST00000539018 CADPS2Q86UW7 1296 aa15.25■□□□□ 0.03
TUBD1-206ENST00000539018 G3V3G9 751 aa15.24■□□□□ 0.03
TUBD1-206ENST00000539018 L3MBTL3Q96JM7 780 aaPredicted RBP15.22■□□□□ 0.03
TUBD1-206ENST00000539018 BOLA1Q9Y3E2 137 aa15.22■□□□□ 0.03
TUBD1-206ENST00000539018 MICALL2Q8IY33 904 aa15.21■□□□□ 0.03
TUBD1-206ENST00000539018 TMEM121BQ9BXQ6 578 aaPredicted RBP15.16■□□□□ 0.02
TUBD1-206ENST00000539018 PDE4AP27815 886 aa15.11■□□□□ 0.01
TUBD1-206ENST00000539018 WDR70Q9NW82 654 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 143.7 ms