RNA–Protein interactions for RNA: ENST00000538647.1

SMCO2-204, Transcript of single-pass membrane protein with coiled-coil domains 2, humanhuman

TSL 5

Gene SMCO2, Length 287 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO2-204ENST00000538647 RGL2O15211 777 aa22.67■■□□□ 1.22
SMCO2-204ENST00000538647 PYGBP11216 843 aa22.55■■□□□ 1.2
SMCO2-204ENST00000538647 PAK3O75914 559 aaPredicted RBP22.53■■□□□ 1.2
SMCO2-204ENST00000538647 CHRM1P11229 460 aaPredicted RBP22.51■■□□□ 1.19
SMCO2-204ENST00000538647 RNF25Q96BH1 459 aaPredicted RBP22.51■■□□□ 1.19
SMCO2-204ENST00000538647 CCDC61Q9Y6R9 512 aa22.48■■□□□ 1.19
SMCO2-204ENST00000538647 CD44P16070 742 aaKnown RBP22.47■■□□□ 1.19
SMCO2-204ENST00000538647 RIOK3O14730 519 aaKnown RBP22.4■■□□□ 1.18
SMCO2-204ENST00000538647 ZRANB1Q9UGI0 708 aa22.39■■□□□ 1.17
SMCO2-204ENST00000538647 C19orf67A6NJJ6 358 aa22.36■■□□□ 1.17
SMCO2-204ENST00000538647 CHGAP10645 457 aaKnown RBP22.27■■□□□ 1.16
SMCO2-204ENST00000538647 TAOK2Q9UL54 1235 aa22.26■■□□□ 1.15
SMCO2-204ENST00000538647 VGFO15240 615 aaPredicted RBP22.24■■□□□ 1.15
SMCO2-204ENST00000538647 PHF12Q96QT6 1004 aa22.24■■□□□ 1.15
SMCO2-204ENST00000538647 KIF12Q96FN5 646 aa22.23■■□□□ 1.15
SMCO2-204ENST00000538647 HAX1O00165 279 aa22.22■■□□□ 1.15
SMCO2-204ENST00000538647 ZNF467Q7Z7K2 595 aaPredicted RBP22.22■■□□□ 1.15
SMCO2-204ENST00000538647 MAP3K13O43283 966 aa22.21■■□□□ 1.15
SMCO2-204ENST00000538647 PCDHB8Q9UN66 801 aa22.2■■□□□ 1.14
SMCO2-204ENST00000538647 PCDHB13Q9Y5F0 798 aa22.2■■□□□ 1.14
SMCO2-204ENST00000538647 ZNF579Q8NAF0 562 aaKnown RBP22.18■■□□□ 1.14
SMCO2-204ENST00000538647 HS6ST3Q8IZP7 471 aa22.17■■□□□ 1.14
SMCO2-204ENST00000538647 POTEHQ6S545 545 aa22.14■■□□□ 1.13
SMCO2-204ENST00000538647 BBXQ8WY36 941 aaPredicted RBP22.14■■□□□ 1.13
SMCO2-204ENST00000538647 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP22.13■■□□□ 1.13
SMCO2-204ENST00000538647 ZFP91Q96JP5 570 aaPredicted RBP22.13■■□□□ 1.13
SMCO2-204ENST00000538647 SGIP1Q9BQI5 828 aa22.13■■□□□ 1.13
SMCO2-204ENST00000538647 IFNL1Q8IU54 200 aa22.12■■□□□ 1.13
SMCO2-204ENST00000538647 STK25O00506 426 aa22.11■■□□□ 1.13
SMCO2-204ENST00000538647 EVX2Q03828 476 aa22.08■■□□□ 1.13
SMCO2-204ENST00000538647 PDAP1Q13442 181 aaKnown RBP22.05■■□□□ 1.12
SMCO2-204ENST00000538647 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.04■■□□□ 1.12
SMCO2-204ENST00000538647 BCL11BQ9C0K0 894 aaPredicted RBP22.03■■□□□ 1.12
SMCO2-204ENST00000538647 PLCB2Q00722 1185 aa22.02■■□□□ 1.12
SMCO2-204ENST00000538647 STK24Q9Y6E0 443 aa22.02■■□□□ 1.12
SMCO2-204ENST00000538647 SLC24A1O60721 1099 aa21.99■■□□□ 1.11
SMCO2-204ENST00000538647 PSEN1P49768 467 aa21.99■■□□□ 1.11
SMCO2-204ENST00000538647 MS4A3Q96HJ5 214 aa21.97■■□□□ 1.11
SMCO2-204ENST00000538647 DNAJC5Q9H3Z4 198 aa21.94■■□□□ 1.1
SMCO2-204ENST00000538647 PAXIP1Q6ZW49 1069 aaPredicted RBP21.9■■□□□ 1.1
SMCO2-204ENST00000538647 NKX1-1Q15270 411 aaPredicted RBP21.87■■□□□ 1.09
SMCO2-204ENST00000538647 CFAP44Q96MT7 982 aa21.86■■□□□ 1.09
SMCO2-204ENST00000538647 TRPC6Q9Y210 931 aa21.85■■□□□ 1.09
SMCO2-204ENST00000538647 SPRYD3Q8NCJ5 442 aa21.83■■□□□ 1.09
SMCO2-204ENST00000538647 GALR2O43603 387 aaPredicted RBP21.82■■□□□ 1.08
SMCO2-204ENST00000538647 CLCN6P51797 869 aa21.78■■□□□ 1.08
SMCO2-204ENST00000538647 TMEM106CQ9BVX2 250 aa21.76■■□□□ 1.07
SMCO2-204ENST00000538647 CABP2Q9NPB3 220 aa21.74■■□□□ 1.07
SMCO2-204ENST00000538647 HAP1P54257 671 aaPredicted RBP21.72■■□□□ 1.07
SMCO2-204ENST00000538647 TIE1P35590 1138 aa21.69■■□□□ 1.06
SMCO2-204ENST00000538647 GTPBP6O43824 516 aaPredicted RBP21.68■■□□□ 1.06
SMCO2-204ENST00000538647 EFCAB3Q8N7B9 438 aa21.66■■□□□ 1.06
SMCO2-204ENST00000538647 GABBR2O75899 941 aa21.65■■□□□ 1.06
SMCO2-204ENST00000538647 BMP2KQ9NSY1 1161 aaPredicted RBP21.65■■□□□ 1.06
SMCO2-204ENST00000538647 TTLL13PA6NNM8 815 aa21.64■■□□□ 1.05
SMCO2-204ENST00000538647 GOLGA2Q08379 1002 aa21.59■■□□□ 1.05
SMCO2-204ENST00000538647 RYDENQ9NUL5 291 aaKnown RBP21.59■■□□□ 1.05
SMCO2-204ENST00000538647 MFRPQ9BY79 579 aa21.57■■□□□ 1.04
SMCO2-204ENST00000538647 SOX12O15370 315 aa21.53■■□□□ 1.04
SMCO2-204ENST00000538647 TSHZ2Q9NRE2 1034 aa21.5■■□□□ 1.03
SMCO2-204ENST00000538647 PHF8Q9UPP1 1060 aa21.5■■□□□ 1.03
SMCO2-204ENST00000538647 TRIM35Q9UPQ4 493 aa21.5■■□□□ 1.03
SMCO2-204ENST00000538647 SP7Q8TDD2 431 aaPredicted RBP21.49■■□□□ 1.03
SMCO2-204ENST00000538647 MKRN3Q13064 507 aaKnown RBP21.48■■□□□ 1.03
SMCO2-204ENST00000538647 ATN1P54259 1190 aaPredicted RBP21.47■■□□□ 1.03
SMCO2-204ENST00000538647 NLRP6P59044 892 aa21.47■■□□□ 1.03
SMCO2-204ENST00000538647 ATMINO43313 823 aaPredicted RBP21.46■■□□□ 1.03
SMCO2-204ENST00000538647 ASTLQ6HA08 431 aaPredicted RBP21.45■■□□□ 1.02
SMCO2-204ENST00000538647 FBXO22Q8NEZ5 403 aa21.45■■□□□ 1.02
SMCO2-204ENST00000538647 DCBLD2Q96PD2 775 aa21.4■■□□□ 1.02
SMCO2-204ENST00000538647 VSIG10Q8N0Z9 540 aa21.34■■□□□ 1.01
SMCO2-204ENST00000538647 MS4A4AQ96JQ5 239 aa21.34■■□□□ 1.01
SMCO2-204ENST00000538647 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.32■■□□□ 1
SMCO2-204ENST00000538647 PPP1R37O75864 691 aa21.31■■□□□ 1
SMCO2-204ENST00000538647 KDM2AQ9Y2K7 1162 aa21.27■■□□□ 1
SMCO2-204ENST00000538647 ILDR1Q86SU0 546 aaPredicted RBP21.26■□□□□ 0.99
SMCO2-204ENST00000538647 PELP1Q8IZL8 1130 aaKnown RBP21.26■□□□□ 0.99
SMCO2-204ENST00000538647 IER5LQ5T953 404 aa21.24■□□□□ 0.99
SMCO2-204ENST00000538647 POTEIP0CG38 1075 aa21.21■□□□□ 0.99
SMCO2-204ENST00000538647 IRX5P78411 483 aaPredicted RBP21.19■□□□□ 0.98
SMCO2-204ENST00000538647 PDCD7Q8N8D1 485 aaKnown RBP21.16■□□□□ 0.98
SMCO2-204ENST00000538647 DPY19L2Q6NUT2 758 aa21.14■□□□□ 0.97
SMCO2-204ENST00000538647 CADPS2Q86UW7 1296 aa21.14■□□□□ 0.97
SMCO2-204ENST00000538647 OCEL1Q9H607 264 aa21.14■□□□□ 0.97
SMCO2-204ENST00000538647 SLC39A7Q92504 469 aa21.11■□□□□ 0.97
SMCO2-204ENST00000538647 PLCG2P16885 1265 aa21.1■□□□□ 0.97
SMCO2-204ENST00000538647 SEC24BO95487 1268 aa21.07■□□□□ 0.96
SMCO2-204ENST00000538647 C7P10643 843 aa21.06■□□□□ 0.96
SMCO2-204ENST00000538647 COLQQ9Y215 455 aaPredicted RBP21.06■□□□□ 0.96
SMCO2-204ENST00000538647 METRNQ9UJH8 293 aa21.04■□□□□ 0.96
SMCO2-204ENST00000538647 POTEFA5A3E0 1075 aa20.98■□□□□ 0.95
SMCO2-204ENST00000538647 MICALL2Q8IY33 904 aa20.95■□□□□ 0.94
SMCO2-204ENST00000538647 BOLA1Q9Y3E2 137 aa20.93■□□□□ 0.94
SMCO2-204ENST00000538647 G3V3G9 751 aa20.89■□□□□ 0.93
SMCO2-204ENST00000538647 NCKAP5LQ9HCH0 1330 aa20.88■□□□□ 0.93
SMCO2-204ENST00000538647 L3MBTL3Q96JM7 780 aaPredicted RBP20.88■□□□□ 0.93
SMCO2-204ENST00000538647 TMEM121BQ9BXQ6 578 aaPredicted RBP20.87■□□□□ 0.93
SMCO2-204ENST00000538647 WDR70Q9NW82 654 aa20.86■□□□□ 0.93
SMCO2-204ENST00000538647 CRISPLD2Q9H0B8 497 aa20.83■□□□□ 0.93
SMCO2-204ENST00000538647 PDE4AP27815 886 aa20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms