RNA–Protein interactions for RNA: ENST00000538503.5

KDM2B-209, Transcript of lysine demethylase 2B, humanhuman

TSL 5

Gene KDM2B, Length 6,676 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM2B-209ENST00000538503 MSH5O43196 834 aa18.06■□□□□ 0.48
KDM2B-209ENST00000538503 CSB-PGBD3P0DP91 1061 aa18.05■□□□□ 0.48
KDM2B-209ENST00000538503 GOLGA2Q08379 1002 aa18.04■□□□□ 0.48
KDM2B-209ENST00000538503 PPM1GO15355 546 aaPredicted RBP18.04■□□□□ 0.48
KDM2B-209ENST00000538503 MTUS2Q5JR59 1369 aa18■□□□□ 0.47
KDM2B-209ENST00000538503 EIF4G2P78344 907 aaKnown RBP eCLIP18■□□□□ 0.479e-10■■■■■ 41.2
KDM2B-209ENST00000538503 ANP32CO43423 234 aa17.99■□□□□ 0.47
KDM2B-209ENST00000538503 PAK3O75914 559 aaPredicted RBP17.99■□□□□ 0.47
KDM2B-209ENST00000538503 CSRNP3Q8WYN3 585 aa17.98■□□□□ 0.47
KDM2B-209ENST00000538503 SF3B2Q13435 895 aaKnown RBP17.98■□□□□ 0.47
KDM2B-209ENST00000538503 G3V3G9 751 aa17.98■□□□□ 0.47
KDM2B-209ENST00000538503 DCAF8Q5TAQ9 597 aa17.98■□□□□ 0.47
KDM2B-209ENST00000538503 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.98■□□□□ 0.47
KDM2B-209ENST00000538503 OSCARQ8IYS5 282 aa17.96■□□□□ 0.46
KDM2B-209ENST00000538503 NCBP3Q53F19 620 aaKnown RBP17.95■□□□□ 0.46
KDM2B-209ENST00000538503 EID1Q9Y6B2 187 aa17.95■□□□□ 0.46
KDM2B-209ENST00000538503 BAZ1BQ9UIG0 1483 aaKnown RBP17.95■□□□□ 0.46
KDM2B-209ENST00000538503 SOX12O15370 315 aa17.94■□□□□ 0.46
KDM2B-209ENST00000538503 KANK1Q14678 1352 aa17.92■□□□□ 0.46
KDM2B-209ENST00000538503 GGT6Q6P531 493 aa17.92■□□□□ 0.46
KDM2B-209ENST00000538503 ISY1Q9ULR0 285 aaKnown RBP17.92■□□□□ 0.46
KDM2B-209ENST00000538503 EIF4G1Q04637 1599 aaKnown RBP17.9■□□□□ 0.46
KDM2B-209ENST00000538503 KRI1Q8N9T8 703 aaKnown RBP17.9■□□□□ 0.46
KDM2B-209ENST00000538503 CFDP1Q9UEE9 299 aaPredicted RBP17.88■□□□□ 0.45
KDM2B-209ENST00000538503 CECR2Q9BXF3 1484 aa17.88■□□□□ 0.45
KDM2B-209ENST00000538503 WDR43Q15061 677 aaKnown RBP eCLIP17.88■□□□□ 0.45
KDM2B-209ENST00000538503 RGL3Q3MIN7 710 aa17.88■□□□□ 0.45
KDM2B-209ENST00000538503 ZNF330Q9Y3S2 320 aaPredicted RBP17.85■□□□□ 0.45
KDM2B-209ENST00000538503 MYH16Q9H6N6 1097 aa17.84■□□□□ 0.45
KDM2B-209ENST00000538503 GTF3C3Q9Y5Q9 886 aa17.83■□□□□ 0.44
KDM2B-209ENST00000538503 CLSTN1O94985 981 aa17.8■□□□□ 0.44
KDM2B-209ENST00000538503 EVA1CP58658 441 aa17.8■□□□□ 0.44
KDM2B-209ENST00000538503 TONSLQ96HA7 1378 aa17.8■□□□□ 0.44
KDM2B-209ENST00000538503 PDS5BQ9NTI5 1447 aa17.79■□□□□ 0.44
KDM2B-209ENST00000538503 HSP90AA1P07900 732 aaKnown RBP17.76■□□□□ 0.43
KDM2B-209ENST00000538503 RRP7BPQ9NSQ0 103 aa17.74■□□□□ 0.43
KDM2B-209ENST00000538503 SALL2Q9Y467 1007 aaPredicted RBP17.73■□□□□ 0.43
KDM2B-209ENST00000538503 CFAP53Q96M91 514 aa17.73■□□□□ 0.43
KDM2B-209ENST00000538503 PPP1R1BQ9UD71 204 aaPredicted RBP17.72■□□□□ 0.43
KDM2B-209ENST00000538503 RSF1Q96T23 1441 aaPredicted RBP17.71■□□□□ 0.43
KDM2B-209ENST00000538503 LAS1LQ9Y4W2 734 aaKnown RBP17.7■□□□□ 0.42
KDM2B-209ENST00000538503 CARMIL2Q6F5E8 1435 aa17.7■□□□□ 0.42
KDM2B-209ENST00000538503 FAM69CQ0P6D2 419 aa17.7■□□□□ 0.42
KDM2B-209ENST00000538503 STK26Q9P289 416 aa17.69■□□□□ 0.42
KDM2B-209ENST00000538503 SAFB2Q14151 953 aaKnown RBP eCLIP17.69■□□□□ 0.42
KDM2B-209ENST00000538503 PIP4K2BP78356 416 aa17.69■□□□□ 0.42
KDM2B-209ENST00000538503 NACADO15069 1562 aa17.69■□□□□ 0.42
KDM2B-209ENST00000538503 TAOK2Q9UL54 1235 aa17.68■□□□□ 0.42
KDM2B-209ENST00000538503 SRPK2P78362 688 aaKnown RBP17.68■□□□□ 0.42
KDM2B-209ENST00000538503 CLIP1P30622 1438 aa17.67■□□□□ 0.42
KDM2B-209ENST00000538503 CWC22Q9HCG8 908 aaKnown RBP17.65■□□□□ 0.42
KDM2B-209ENST00000538503 GTF2E1P29083 439 aaPredicted RBP17.65■□□□□ 0.42
KDM2B-209ENST00000538503 ANP32AP39687 249 aaKnown RBP17.62■□□□□ 0.41
KDM2B-209ENST00000538503 OS9Q13438 667 aaPredicted RBP17.62■□□□□ 0.41
KDM2B-209ENST00000538503 CCDC180Q9P1Z9 1646 aa17.61■□□□□ 0.41
KDM2B-209ENST00000538503 MAPK8IP3Q9UPT6 1336 aa17.6■□□□□ 0.41
KDM2B-209ENST00000538503 CDCA8Q53HL2 280 aa17.59■□□□□ 0.41
KDM2B-209ENST00000538503 NGDNQ8NEJ9 315 aaKnown RBP17.56■□□□□ 0.4
KDM2B-209ENST00000538503 NUDCQ9Y266 331 aa17.55■□□□□ 0.4
KDM2B-209ENST00000538503 ATF3P18847 181 aa17.54■□□□□ 0.4
KDM2B-209ENST00000538503 CCNB3Q8WWL7 1395 aa17.54■□□□□ 0.4
KDM2B-209ENST00000538503 TNNT2P45379 298 aaPredicted RBP17.54■□□□□ 0.4
KDM2B-209ENST00000538503 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.53■□□□□ 0.4
KDM2B-209ENST00000538503 UPF2Q9HAU5 1272 aaKnown RBP17.53■□□□□ 0.4
KDM2B-209ENST00000538503 NUTM2BA6NNL0 878 aaPredicted RBP17.52■□□□□ 0.4
KDM2B-209ENST00000538503 NUTM2EB1AL46 878 aaPredicted RBP17.52■□□□□ 0.4
KDM2B-209ENST00000538503 NUTM2AQ8IVF1 878 aaPredicted RBP17.52■□□□□ 0.4
KDM2B-209ENST00000538503 RTF1Q92541 710 aaKnown RBP17.52■□□□□ 0.39
KDM2B-209ENST00000538503 EFCAB2Q5VUJ9 269 aa17.51■□□□□ 0.39
KDM2B-209ENST00000538503 EIF5BO60841 1220 aaKnown RBP17.5■□□□□ 0.39
KDM2B-209ENST00000538503 ANP32BQ92688 251 aaKnown RBP17.49■□□□□ 0.39
KDM2B-209ENST00000538503 SYTL4Q96C24 671 aaPredicted RBP17.49■□□□□ 0.39
KDM2B-209ENST00000538503 WASHC2CQ9Y4E1 1318 aa17.49■□□□□ 0.39
KDM2B-209ENST00000538503 U2SURPO15042 1029 aaKnown RBP17.48■□□□□ 0.39
KDM2B-209ENST00000538503 KNSTRNQ9Y448 316 aa17.48■□□□□ 0.39
KDM2B-209ENST00000538503 HDGFL2Q7Z4V5 671 aaPredicted RBP17.47■□□□□ 0.39
KDM2B-209ENST00000538503 KIF27Q86VH2 1401 aa17.47■□□□□ 0.39
KDM2B-209ENST00000538503 SMARCA2P51531 1590 aa17.46■□□□□ 0.39
KDM2B-209ENST00000538503 NUTM2FA1L443 756 aa17.46■□□□□ 0.39
KDM2B-209ENST00000538503 PRM3Q9NNZ6 103 aa17.46■□□□□ 0.39
KDM2B-209ENST00000538503 FKBP8Q14318 412 aa17.45■□□□□ 0.38
KDM2B-209ENST00000538503 FAM9BQ8IZU0 186 aa17.44■□□□□ 0.38
KDM2B-209ENST00000538503 TAF7LQ5H9L4 462 aa17.43■□□□□ 0.38
KDM2B-209ENST00000538503 PNNQ9H307 717 aaKnown RBP17.43■□□□□ 0.38
KDM2B-209ENST00000538503 NAP1L2Q9ULW6 460 aaPredicted RBP17.43■□□□□ 0.38
KDM2B-209ENST00000538503 ZCCHC6Q5VYS8 1495 aaKnown RBP17.43■□□□□ 0.38
KDM2B-209ENST00000538503 FBXW7Q969H0 707 aa17.43■□□□□ 0.38
KDM2B-209ENST00000538503 NUTM2DQ5VT03 806 aaPredicted RBP17.42■□□□□ 0.38
KDM2B-209ENST00000538503 FRAT2O75474 233 aaPredicted RBP17.41■□□□□ 0.38
KDM2B-209ENST00000538503 CTDP1Q9Y5B0 961 aaPredicted RBP17.41■□□□□ 0.38
KDM2B-209ENST00000538503 KIF3BO15066 747 aa17.4■□□□□ 0.38
KDM2B-209ENST00000538503 CFAP44Q96MT7 982 aa17.4■□□□□ 0.38
KDM2B-209ENST00000538503 LTV1Q96GA3 475 aaPredicted RBP17.39■□□□□ 0.37
KDM2B-209ENST00000538503 WRNQ14191 1432 aaPredicted RBP eCLIP17.38■□□□□ 0.37
KDM2B-209ENST00000538503 TRIM34Q9BYJ4 488 aa17.37■□□□□ 0.37
KDM2B-209ENST00000538503 CHMP3Q9Y3E7 222 aa17.37■□□□□ 0.37
KDM2B-209ENST00000538503 NEUROD2Q15784 382 aa17.37■□□□□ 0.37
KDM2B-209ENST00000538503 CNKSR2Q8WXI2 1034 aa17.37■□□□□ 0.37
KDM2B-209ENST00000538503 FGD1P98174 961 aa17.37■□□□□ 0.37
KDM2B-209ENST00000538503 ACIN1Q9UKV3 1341 aaKnown RBP17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms