RNA–Protein interactions for RNA: ENST00000538454.2

MDM1-208, Transcript of Mdm1 nuclear protein, humanhuman

TSL 3

Gene MDM1, Length 718 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM1-208ENST00000538454 DCBLD2Q96PD2 775 aa15.3■□□□□ 0.04
MDM1-208ENST00000538454 POTEIP0CG38 1075 aa15.28■□□□□ 0.04
MDM1-208ENST00000538454 NUBP1P53384 320 aa15.28■□□□□ 0.04
MDM1-208ENST00000538454 MS4A3Q96HJ5 214 aa15.24■□□□□ 0.03
MDM1-208ENST00000538454 KLHL34Q8N239 644 aa15.22■□□□□ 0.03
MDM1-208ENST00000538454 FAM212AQ96EL1 285 aa15.2■□□□□ 0.02
MDM1-208ENST00000538454 KIF12Q96FN5 646 aa15.19■□□□□ 0.02
MDM1-208ENST00000538454 MAP3K13O43283 966 aa15.13■□□□□ 0.01
MDM1-208ENST00000538454 DCAF8Q5TAQ9 597 aa15.11■□□□□ 0.01
MDM1-208ENST00000538454 IFNLR1Q8IU57 520 aaPredicted RBP15.07■□□□□ 0
MDM1-208ENST00000538454 LHX8Q68G74 356 aa15.04■□□□□ -0
MDM1-208ENST00000538454 PCDHB13Q9Y5F0 798 aa15.04■□□□□ -0
MDM1-208ENST00000538454 ASTLQ6HA08 431 aaPredicted RBP15.03■□□□□ -0
MDM1-208ENST00000538454 TRPC6Q9Y210 931 aa15.03■□□□□ -0
MDM1-208ENST00000538454 ATMINO43313 823 aaPredicted RBP15.02■□□□□ -0
MDM1-208ENST00000538454 SGIP1Q9BQI5 828 aa15.01□□□□□ -0.01
MDM1-208ENST00000538454 PELP1Q8IZL8 1130 aaKnown RBP15□□□□□ -0.01
MDM1-208ENST00000538454 SPOCK2Q92563 424 aa15□□□□□ -0.01
MDM1-208ENST00000538454 PYGBP11216 843 aa14.99□□□□□ -0.01
MDM1-208ENST00000538454 GSE1Q14687 1217 aa14.99□□□□□ -0.01
MDM1-208ENST00000538454 BMP2KQ9NSY1 1161 aaPredicted RBP14.97□□□□□ -0.01
MDM1-208ENST00000538454 TIE1P35590 1138 aa14.95□□□□□ -0.02
MDM1-208ENST00000538454 ATN1P54259 1190 aaPredicted RBP14.95□□□□□ -0.02
MDM1-208ENST00000538454 IFNL1Q8IU54 200 aa14.95□□□□□ -0.02
MDM1-208ENST00000538454 SLC39A7Q92504 469 aa14.9□□□□□ -0.02
MDM1-208ENST00000538454 METRNQ9UJH8 293 aa14.89□□□□□ -0.03
MDM1-208ENST00000538454 CIZ1Q9ULV3 898 aaPredicted RBP14.89□□□□□ -0.03
MDM1-208ENST00000538454 TTLL13PA6NNM8 815 aa14.88□□□□□ -0.03
MDM1-208ENST00000538454 C7P10643 843 aa14.86□□□□□ -0.03
MDM1-208ENST00000538454 PCDHB8Q9UN66 801 aa14.84□□□□□ -0.03
MDM1-208ENST00000538454 TMEM106CQ9BVX2 250 aa14.82□□□□□ -0.04
MDM1-208ENST00000538454 POTEB2H3BUK9 544 aa14.8□□□□□ -0.04
MDM1-208ENST00000538454 TRIM35Q9UPQ4 493 aa14.8□□□□□ -0.04
MDM1-208ENST00000538454 CHRM1P11229 460 aaPredicted RBP14.79□□□□□ -0.04
MDM1-208ENST00000538454 ZNF467Q7Z7K2 595 aaPredicted RBP14.77□□□□□ -0.05
MDM1-208ENST00000538454 POTEFA5A3E0 1075 aa14.7□□□□□ -0.06
MDM1-208ENST00000538454 SEC24BO95487 1268 aa14.69□□□□□ -0.06
MDM1-208ENST00000538454 IER5LQ5T953 404 aa14.69□□□□□ -0.06
MDM1-208ENST00000538454 OTUD5Q96G74 571 aa14.67□□□□□ -0.06
MDM1-208ENST00000538454 TRIM41Q8WV44 630 aa14.66□□□□□ -0.06
MDM1-208ENST00000538454 COLQQ9Y215 455 aaPredicted RBP14.66□□□□□ -0.06
MDM1-208ENST00000538454 PSEN1P49768 467 aa14.64□□□□□ -0.07
MDM1-208ENST00000538454 POTEJP0CG39 1038 aa14.63□□□□□ -0.07
MDM1-208ENST00000538454 PDAP1Q13442 181 aaKnown RBP14.61□□□□□ -0.07
MDM1-208ENST00000538454 PLCG2P16885 1265 aa14.58□□□□□ -0.08
MDM1-208ENST00000538454 MAMSTRQ6ZN01 415 aa14.58□□□□□ -0.08
MDM1-208ENST00000538454 GOLGA2Q08379 1002 aa14.57□□□□□ -0.08
MDM1-208ENST00000538454 IRX5P78411 483 aaPredicted RBP14.55□□□□□ -0.08
MDM1-208ENST00000538454 SCUBE2Q9NQ36 999 aa14.54□□□□□ -0.08
MDM1-208ENST00000538454 MKRN3Q13064 507 aaKnown RBP14.52□□□□□ -0.09
MDM1-208ENST00000538454 OCEL1Q9H607 264 aa14.5□□□□□ -0.09
MDM1-208ENST00000538454 RNF25Q96BH1 459 aaPredicted RBP14.48□□□□□ -0.09
MDM1-208ENST00000538454 CABP2Q9NPB3 220 aa14.48□□□□□ -0.09
MDM1-208ENST00000538454 RIOK3O14730 519 aaKnown RBP14.47□□□□□ -0.09
MDM1-208ENST00000538454 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.42□□□□□ -0.1
MDM1-208ENST00000538454 ECM2O94769 699 aaPredicted RBP14.41□□□□□ -0.1
MDM1-208ENST00000538454 PDCD7Q8N8D1 485 aaKnown RBP14.41□□□□□ -0.1
MDM1-208ENST00000538454 VGFO15240 615 aaPredicted RBP14.39□□□□□ -0.11
MDM1-208ENST00000538454 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.37□□□□□ -0.11
MDM1-208ENST00000538454 ZFP91Q96JP5 570 aaPredicted RBP14.37□□□□□ -0.11
MDM1-208ENST00000538454 PKD2Q13563 968 aa14.36□□□□□ -0.11
MDM1-208ENST00000538454 EFCAB3Q8N7B9 438 aa14.33□□□□□ -0.12
MDM1-208ENST00000538454 SLAIN1Q8ND83 568 aa14.31□□□□□ -0.12
MDM1-208ENST00000538454 ILDR1Q86SU0 546 aaPredicted RBP14.3□□□□□ -0.12
MDM1-208ENST00000538454 L3MBTL3Q96JM7 780 aaPredicted RBP14.3□□□□□ -0.12
MDM1-208ENST00000538454 TAOK2Q9UL54 1235 aa14.3□□□□□ -0.12
MDM1-208ENST00000538454 RGL2O15211 777 aa14.27□□□□□ -0.13
MDM1-208ENST00000538454 DPY19L2Q6NUT2 758 aa14.27□□□□□ -0.13
MDM1-208ENST00000538454 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.27□□□□□ -0.13
MDM1-208ENST00000538454 C3orf67Q6ZVT6 689 aa14.24□□□□□ -0.13
MDM1-208ENST00000538454 BCL11BQ9C0K0 894 aaPredicted RBP14.24□□□□□ -0.13
MDM1-208ENST00000538454 FAM163AQ96GL9 167 aaPredicted RBP14.22□□□□□ -0.13
MDM1-208ENST00000538454 STK24Q9Y6E0 443 aa14.22□□□□□ -0.13
MDM1-208ENST00000538454 G3V3G9 751 aa14.21□□□□□ -0.13
MDM1-208ENST00000538454 STK25O00506 426 aa14.2□□□□□ -0.14
MDM1-208ENST00000538454 SOX12O15370 315 aa14.19□□□□□ -0.14
MDM1-208ENST00000538454 BOLA1Q9Y3E2 137 aa14.18□□□□□ -0.14
MDM1-208ENST00000538454 PHF8Q9UPP1 1060 aa14.16□□□□□ -0.14
MDM1-208ENST00000538454 LCE2DQ5TA82 110 aaPredicted RBP14.15□□□□□ -0.14
MDM1-208ENST00000538454 POTEMA6NI47 508 aa14.14□□□□□ -0.15
MDM1-208ENST00000538454 POTEGQ6S5H5 508 aa14.12□□□□□ -0.15
MDM1-208ENST00000538454 MS4A4AQ96JQ5 239 aa14.12□□□□□ -0.15
MDM1-208ENST00000538454 NLRP6P59044 892 aa14.08□□□□□ -0.16
MDM1-208ENST00000538454 TMEM121BQ9BXQ6 578 aaPredicted RBP14.06□□□□□ -0.16
MDM1-208ENST00000538454 SNPHO15079 494 aa14.05□□□□□ -0.16
MDM1-208ENST00000538454 MICALL2Q8IY33 904 aa14.05□□□□□ -0.16
MDM1-208ENST00000538454 FBXO22Q8NEZ5 403 aa14.04□□□□□ -0.16
MDM1-208ENST00000538454 MFRPQ9BY79 579 aa14.04□□□□□ -0.16
MDM1-208ENST00000538454 ST18O60284 1047 aa14.03□□□□□ -0.16
MDM1-208ENST00000538454 HS6ST3Q8IZP7 471 aa13.96□□□□□ -0.17
MDM1-208ENST00000538454 CHGAP10645 457 aaKnown RBP13.94□□□□□ -0.18
MDM1-208ENST00000538454 TMEM92Q6UXU6 159 aa13.92□□□□□ -0.18
MDM1-208ENST00000538454 MARVELD3Q96A59 401 aa13.86□□□□□ -0.19
MDM1-208ENST00000538454 HOXB3P14651 431 aaPredicted RBP13.85□□□□□ -0.19
MDM1-208ENST00000538454 PCDH10Q9P2E7 1040 aa13.85□□□□□ -0.19
MDM1-208ENST00000538454 PPP1R37O75864 691 aa13.82□□□□□ -0.2
MDM1-208ENST00000538454 DCAF8L2P0C7V8 631 aa13.82□□□□□ -0.2
MDM1-208ENST00000538454 DOK7Q18PE1 504 aa13.82□□□□□ -0.2
MDM1-208ENST00000538454 ZNF710Q8N1W2 664 aa13.81□□□□□ -0.2
MDM1-208ENST00000538454 PLSCR2Q9NRY7 297 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms