RNA–Protein interactions for RNA: ENST00000538266.5

SNHG1-208, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 347 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-208ENST00000538266 ECM2O94769 699 aaPredicted RBP8.61□□□□□ -1.03
SNHG1-208ENST00000538266 PAK3O75914 559 aaPredicted RBP8.58□□□□□ -1.04
SNHG1-208ENST00000538266 CD44P16070 742 aaKnown RBP8.56□□□□□ -1.04
SNHG1-208ENST00000538266 TRIM41Q8WV44 630 aa8.56□□□□□ -1.04
SNHG1-208ENST00000538266 HAX1O00165 279 aa8.55□□□□□ -1.04
SNHG1-208ENST00000538266 POTEHQ6S545 545 aa8.55□□□□□ -1.04
SNHG1-208ENST00000538266 ZRANB1Q9UGI0 708 aa8.54□□□□□ -1.04
SNHG1-208ENST00000538266 C19orf67A6NJJ6 358 aa8.53□□□□□ -1.04
SNHG1-208ENST00000538266 PYGBP11216 843 aa8.53□□□□□ -1.04
SNHG1-208ENST00000538266 CHRM1P11229 460 aaPredicted RBP8.52□□□□□ -1.05
SNHG1-208ENST00000538266 CCDC61Q9Y6R9 512 aa8.51□□□□□ -1.05
SNHG1-208ENST00000538266 RGL2O15211 777 aa8.5□□□□□ -1.05
SNHG1-208ENST00000538266 DCAF8L2P0C7V8 631 aa8.5□□□□□ -1.05
SNHG1-208ENST00000538266 EVX2Q03828 476 aa8.46□□□□□ -1.06
SNHG1-208ENST00000538266 KIF12Q96FN5 646 aa8.44□□□□□ -1.06
SNHG1-208ENST00000538266 PHF12Q96QT6 1004 aa8.44□□□□□ -1.06
SNHG1-208ENST00000538266 RIOK3O14730 519 aaKnown RBP8.43□□□□□ -1.06
SNHG1-208ENST00000538266 MAP3K13O43283 966 aa8.43□□□□□ -1.06
SNHG1-208ENST00000538266 RNF25Q96BH1 459 aaPredicted RBP8.43□□□□□ -1.06
SNHG1-208ENST00000538266 ZNF579Q8NAF0 562 aaKnown RBP8.42□□□□□ -1.06
SNHG1-208ENST00000538266 PCDHB13Q9Y5F0 798 aa8.42□□□□□ -1.06
SNHG1-208ENST00000538266 ZCCHC6Q5VYS8 1495 aaKnown RBP8.41□□□□□ -1.06
SNHG1-208ENST00000538266 SGIP1Q9BQI5 828 aa8.41□□□□□ -1.06
SNHG1-208ENST00000538266 TAOK2Q9UL54 1235 aa8.41□□□□□ -1.06
SNHG1-208ENST00000538266 PCDHB8Q9UN66 801 aa8.41□□□□□ -1.06
SNHG1-208ENST00000538266 ZNF467Q7Z7K2 595 aaPredicted RBP8.4□□□□□ -1.06
SNHG1-208ENST00000538266 IFNL1Q8IU54 200 aa8.38□□□□□ -1.07
SNHG1-208ENST00000538266 VGFO15240 615 aaPredicted RBP8.37□□□□□ -1.07
SNHG1-208ENST00000538266 CHGAP10645 457 aaKnown RBP8.37□□□□□ -1.07
SNHG1-208ENST00000538266 NACADO15069 1562 aa8.36□□□□□ -1.07
SNHG1-208ENST00000538266 RB1CC1Q8TDY2 1594 aa8.35□□□□□ -1.07
SNHG1-208ENST00000538266 CLCN6P51797 869 aa8.35□□□□□ -1.07
SNHG1-208ENST00000538266 DCAF1Q9Y4B6 1507 aa8.34□□□□□ -1.08
SNHG1-208ENST00000538266 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.33□□□□□ -1.08
SNHG1-208ENST00000538266 PSEN1P49768 467 aa8.33□□□□□ -1.08
SNHG1-208ENST00000538266 PDAP1Q13442 181 aaKnown RBP8.33□□□□□ -1.08
SNHG1-208ENST00000538266 MS4A3Q96HJ5 214 aa8.33□□□□□ -1.08
SNHG1-208ENST00000538266 ZFP91Q96JP5 570 aaPredicted RBP8.33□□□□□ -1.08
SNHG1-208ENST00000538266 MYO15BQ96JP2 1530 aa8.33□□□□□ -1.08
SNHG1-208ENST00000538266 STK25O00506 426 aa8.32□□□□□ -1.08
SNHG1-208ENST00000538266 GALR2O43603 387 aaPredicted RBP8.31□□□□□ -1.08
SNHG1-208ENST00000538266 GABBR2O75899 941 aa8.3□□□□□ -1.08
SNHG1-208ENST00000538266 BCL11BQ9C0K0 894 aaPredicted RBP8.3□□□□□ -1.08
SNHG1-208ENST00000538266 STK24Q9Y6E0 443 aa8.3□□□□□ -1.08
SNHG1-208ENST00000538266 HS6ST3Q8IZP7 471 aa8.29□□□□□ -1.08
SNHG1-208ENST00000538266 BBXQ8WY36 941 aaPredicted RBP8.28□□□□□ -1.08
SNHG1-208ENST00000538266 TRPC6Q9Y210 931 aa8.28□□□□□ -1.08
SNHG1-208ENST00000538266 TMEM106CQ9BVX2 250 aa8.26□□□□□ -1.09
SNHG1-208ENST00000538266 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.26□□□□□ -1.09
SNHG1-208ENST00000538266 SP7Q8TDD2 431 aaPredicted RBP8.25□□□□□ -1.09
SNHG1-208ENST00000538266 TIE1P35590 1138 aa8.24□□□□□ -1.09
SNHG1-208ENST00000538266 TTLL13PA6NNM8 815 aa8.22□□□□□ -1.09
SNHG1-208ENST00000538266 CABP2Q9NPB3 220 aa8.22□□□□□ -1.09
SNHG1-208ENST00000538266 BMP2KQ9NSY1 1161 aaPredicted RBP8.22□□□□□ -1.09
SNHG1-208ENST00000538266 DCBLD2Q96PD2 775 aa8.21□□□□□ -1.1
SNHG1-208ENST00000538266 DNAJC5Q9H3Z4 198 aa8.21□□□□□ -1.1
SNHG1-208ENST00000538266 GOLGA2Q08379 1002 aa8.2□□□□□ -1.1
SNHG1-208ENST00000538266 NKX1-1Q15270 411 aaPredicted RBP8.19□□□□□ -1.1
SNHG1-208ENST00000538266 PAXIP1Q6ZW49 1069 aaPredicted RBP8.19□□□□□ -1.1
SNHG1-208ENST00000538266 EFCAB3Q8N7B9 438 aa8.19□□□□□ -1.1
SNHG1-208ENST00000538266 SPRYD3Q8NCJ5 442 aa8.19□□□□□ -1.1
SNHG1-208ENST00000538266 CFAP44Q96MT7 982 aa8.19□□□□□ -1.1
SNHG1-208ENST00000538266 ATMINO43313 823 aaPredicted RBP8.17□□□□□ -1.1
SNHG1-208ENST00000538266 PLCB2Q00722 1185 aa8.17□□□□□ -1.1
SNHG1-208ENST00000538266 MKRN3Q13064 507 aaKnown RBP8.17□□□□□ -1.1
SNHG1-208ENST00000538266 TRIM35Q9UPQ4 493 aa8.17□□□□□ -1.1
SNHG1-208ENST00000538266 SOX12O15370 315 aa8.16□□□□□ -1.1
SNHG1-208ENST00000538266 ATN1P54259 1190 aaPredicted RBP8.16□□□□□ -1.1
SNHG1-208ENST00000538266 ASTLQ6HA08 431 aaPredicted RBP8.16□□□□□ -1.1
SNHG1-208ENST00000538266 SCRIBQ14160 1630 aa8.15□□□□□ -1.1
SNHG1-208ENST00000538266 UNC13AQ9UPW8 1703 aa8.13□□□□□ -1.11
SNHG1-208ENST00000538266 GTPBP6O43824 516 aaPredicted RBP8.13□□□□□ -1.11
SNHG1-208ENST00000538266 MFRPQ9BY79 579 aa8.12□□□□□ -1.11
SNHG1-208ENST00000538266 RYDENQ9NUL5 291 aaKnown RBP8.12□□□□□ -1.11
SNHG1-208ENST00000538266 PHF8Q9UPP1 1060 aa8.12□□□□□ -1.11
SNHG1-208ENST00000538266 POTEIP0CG38 1075 aa8.11□□□□□ -1.11
SNHG1-208ENST00000538266 NLRP6P59044 892 aa8.11□□□□□ -1.11
SNHG1-208ENST00000538266 PELP1Q8IZL8 1130 aaKnown RBP8.11□□□□□ -1.11
SNHG1-208ENST00000538266 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.1□□□□□ -1.11
SNHG1-208ENST00000538266 FBXO22Q8NEZ5 403 aa8.08□□□□□ -1.12
SNHG1-208ENST00000538266 HAP1P54257 671 aaPredicted RBP8.07□□□□□ -1.12
SNHG1-208ENST00000538266 IER5LQ5T953 404 aa8.07□□□□□ -1.12
SNHG1-208ENST00000538266 SLC39A7Q92504 469 aa8.06□□□□□ -1.12
SNHG1-208ENST00000538266 OCEL1Q9H607 264 aa8.06□□□□□ -1.12
SNHG1-208ENST00000538266 SEC24BO95487 1268 aa8.05□□□□□ -1.12
SNHG1-208ENST00000538266 C7P10643 843 aa8.05□□□□□ -1.12
SNHG1-208ENST00000538266 BICRAQ9NZM4 1560 aa8.05□□□□□ -1.12
SNHG1-208ENST00000538266 SLC24A1O60721 1099 aa8.04□□□□□ -1.12
SNHG1-208ENST00000538266 PPP1R37O75864 691 aa8.04□□□□□ -1.12
SNHG1-208ENST00000538266 IRX5P78411 483 aaPredicted RBP8.04□□□□□ -1.12
SNHG1-208ENST00000538266 MS4A4AQ96JQ5 239 aa8.04□□□□□ -1.12
SNHG1-208ENST00000538266 SHROOM4Q9ULL8 1493 aa8.04□□□□□ -1.12
SNHG1-208ENST00000538266 ILDR1Q86SU0 546 aaPredicted RBP8.03□□□□□ -1.12
SNHG1-208ENST00000538266 TSHZ2Q9NRE2 1034 aa8.03□□□□□ -1.12
SNHG1-208ENST00000538266 PLCG2P16885 1265 aa8.02□□□□□ -1.13
SNHG1-208ENST00000538266 DPY19L2Q6NUT2 758 aa8.02□□□□□ -1.13
SNHG1-208ENST00000538266 METRNQ9UJH8 293 aa8.01□□□□□ -1.13
SNHG1-208ENST00000538266 COLQQ9Y215 455 aaPredicted RBP8.01□□□□□ -1.13
SNHG1-208ENST00000538266 PDCD7Q8N8D1 485 aaKnown RBP8□□□□□ -1.13
SNHG1-208ENST00000538266 POTEFA5A3E0 1075 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms