RNA–Protein interactions for RNA: ENST00000537869.5

SNHG1-205, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 1,038 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-205ENST00000537869 RNF25Q96BH1 459 aaPredicted RBP13.75□□□□□ -0.21
SNHG1-205ENST00000537869 VSIG10Q8N0Z9 540 aa13.74□□□□□ -0.21
SNHG1-205ENST00000537869 SPRYD3Q8NCJ5 442 aa13.71□□□□□ -0.21
SNHG1-205ENST00000537869 FAM212AQ96EL1 285 aa13.7□□□□□ -0.22
SNHG1-205ENST00000537869 RASEFQ8IZ41 740 aa13.69□□□□□ -0.22
SNHG1-205ENST00000537869 HS6ST3Q8IZP7 471 aa13.67□□□□□ -0.22
SNHG1-205ENST00000537869 KDM2AQ9Y2K7 1162 aa13.66□□□□□ -0.22
SNHG1-205ENST00000537869 RIOK3O14730 519 aaKnown RBP13.63□□□□□ -0.23
SNHG1-205ENST00000537869 TSHZ2Q9NRE2 1034 aa13.61□□□□□ -0.23
SNHG1-205ENST00000537869 CHRM1P11229 460 aaPredicted RBP13.6□□□□□ -0.23
SNHG1-205ENST00000537869 CHADLQ6NUI6 762 aa13.58□□□□□ -0.24
SNHG1-205ENST00000537869 TAOK2Q9UL54 1235 aa13.57□□□□□ -0.24
SNHG1-205ENST00000537869 DNAJC5Q9H3Z4 198 aa13.56□□□□□ -0.24
SNHG1-205ENST00000537869 PYGBP11216 843 aa13.54□□□□□ -0.24
SNHG1-205ENST00000537869 VGFO15240 615 aaPredicted RBP13.53□□□□□ -0.24
SNHG1-205ENST00000537869 NKX1-1Q15270 411 aaPredicted RBP13.52□□□□□ -0.25
SNHG1-205ENST00000537869 BCANQ96GW7 911 aa13.52□□□□□ -0.25
SNHG1-205ENST00000537869 STK25O00506 426 aa13.5□□□□□ -0.25
SNHG1-205ENST00000537869 TSPYL2Q9H2G4 693 aaPredicted RBP13.47□□□□□ -0.25
SNHG1-205ENST00000537869 FARP1Q9Y4F1 1045 aaPredicted RBP13.47□□□□□ -0.25
SNHG1-205ENST00000537869 SGIP1Q9BQI5 828 aa13.46□□□□□ -0.25
SNHG1-205ENST00000537869 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.45□□□□□ -0.26
SNHG1-205ENST00000537869 ZFP91Q96JP5 570 aaPredicted RBP13.45□□□□□ -0.26
SNHG1-205ENST00000537869 GTPBP6O43824 516 aaPredicted RBP13.44□□□□□ -0.26
SNHG1-205ENST00000537869 PRKAR2AP13861 404 aaKnown RBP13.42□□□□□ -0.26
SNHG1-205ENST00000537869 BCL11BQ9C0K0 894 aaPredicted RBP13.42□□□□□ -0.26
SNHG1-205ENST00000537869 STK24Q9Y6E0 443 aa13.42□□□□□ -0.26
SNHG1-205ENST00000537869 FXR2P51116 673 aaKnown RBP eCLIP13.38□□□□□ -0.27
SNHG1-205ENST00000537869 ZNF467Q7Z7K2 595 aaPredicted RBP13.32□□□□□ -0.28
SNHG1-205ENST00000537869 CCDC61Q9Y6R9 512 aa13.31□□□□□ -0.28
SNHG1-205ENST00000537869 PCDHB8Q9UN66 801 aa13.3□□□□□ -0.28
SNHG1-205ENST00000537869 PCDHB13Q9Y5F0 798 aa13.3□□□□□ -0.28
SNHG1-205ENST00000537869 PRKCSHP14314 528 aaPredicted RBP13.28□□□□□ -0.28
SNHG1-205ENST00000537869 CHRDL2Q6WN34 429 aa13.28□□□□□ -0.28
SNHG1-205ENST00000537869 PDAP1Q13442 181 aaKnown RBP13.25□□□□□ -0.29
SNHG1-205ENST00000537869 PIP4P2Q8N4L2 257 aa13.25□□□□□ -0.29
SNHG1-205ENST00000537869 RYDENQ9NUL5 291 aaKnown RBP13.24□□□□□ -0.29
SNHG1-205ENST00000537869 ZNF579Q8NAF0 562 aaKnown RBP13.21□□□□□ -0.29
SNHG1-205ENST00000537869 PAK3O75914 559 aaPredicted RBP13.2□□□□□ -0.3
SNHG1-205ENST00000537869 PSEN1P49768 467 aa13.2□□□□□ -0.3
SNHG1-205ENST00000537869 MAP3K13O43283 966 aa13.16□□□□□ -0.3
SNHG1-205ENST00000537869 IFNL1Q8IU54 200 aa13.16□□□□□ -0.3
SNHG1-205ENST00000537869 KIF12Q96FN5 646 aa13.15□□□□□ -0.3
SNHG1-205ENST00000537869 TPRNQ4KMQ1 711 aa13.14□□□□□ -0.31
SNHG1-205ENST00000537869 NBR1Q14596 966 aa13.13□□□□□ -0.31
SNHG1-205ENST00000537869 MFRPQ9BY79 579 aa13.1□□□□□ -0.31
SNHG1-205ENST00000537869 ZRANB1Q9UGI0 708 aa13.09□□□□□ -0.31
SNHG1-205ENST00000537869 CD44P16070 742 aaKnown RBP13.06□□□□□ -0.32
SNHG1-205ENST00000537869 CADPS2Q86UW7 1296 aa13.06□□□□□ -0.32
SNHG1-205ENST00000537869 EFCAB3Q8N7B9 438 aa13.05□□□□□ -0.32
SNHG1-205ENST00000537869 CABP2Q9NPB3 220 aa13.04□□□□□ -0.32
SNHG1-205ENST00000537869 PHF12Q96QT6 1004 aa13.03□□□□□ -0.32
SNHG1-205ENST00000537869 PPP1R37O75864 691 aa13□□□□□ -0.33
SNHG1-205ENST00000537869 SOX12O15370 315 aa12.98□□□□□ -0.33
SNHG1-205ENST00000537869 FBXO22Q8NEZ5 403 aa12.98□□□□□ -0.33
SNHG1-205ENST00000537869 NLRP6P59044 892 aa12.97□□□□□ -0.33
SNHG1-205ENST00000537869 PHF8Q9UPP1 1060 aa12.97□□□□□ -0.33
SNHG1-205ENST00000537869 WDR70Q9NW82 654 aa12.95□□□□□ -0.34
SNHG1-205ENST00000537869 C19orf67A6NJJ6 358 aa12.9□□□□□ -0.34
SNHG1-205ENST00000537869 P3H3Q8IVL6 736 aa12.9□□□□□ -0.34
SNHG1-205ENST00000537869 TRPC6Q9Y210 931 aa12.9□□□□□ -0.34
SNHG1-205ENST00000537869 MS4A3Q96HJ5 214 aa12.89□□□□□ -0.35
SNHG1-205ENST00000537869 KCNV2Q8TDN2 545 aa12.88□□□□□ -0.35
SNHG1-205ENST00000537869 TMEM106CQ9BVX2 250 aa12.88□□□□□ -0.35
SNHG1-205ENST00000537869 MS4A4AQ96JQ5 239 aa12.85□□□□□ -0.35
SNHG1-205ENST00000537869 GOLGA2Q08379 1002 aa12.84□□□□□ -0.35
SNHG1-205ENST00000537869 MKRN3Q13064 507 aaKnown RBP12.77□□□□□ -0.37
SNHG1-205ENST00000537869 TIE1P35590 1138 aa12.76□□□□□ -0.37
SNHG1-205ENST00000537869 NCKAP5LQ9HCH0 1330 aa12.76□□□□□ -0.37
SNHG1-205ENST00000537869 E2F4Q16254 413 aa12.75□□□□□ -0.37
SNHG1-205ENST00000537869 TTLL13PA6NNM8 815 aa12.74□□□□□ -0.37
SNHG1-205ENST00000537869 LARP6Q9BRS8 491 aaKnown RBP12.73□□□□□ -0.37
SNHG1-205ENST00000537869 ARHGEF1Q92888 912 aaKnown RBP12.72□□□□□ -0.37
SNHG1-205ENST00000537869 PDE4AP27815 886 aa12.71□□□□□ -0.37
SNHG1-205ENST00000537869 BMP2KQ9NSY1 1161 aaPredicted RBP12.71□□□□□ -0.37
SNHG1-205ENST00000537869 GALR2O43603 387 aaPredicted RBP12.7□□□□□ -0.38
SNHG1-205ENST00000537869 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.69□□□□□ -0.38
SNHG1-205ENST00000537869 CRISPLD2Q9H0B8 497 aa12.69□□□□□ -0.38
SNHG1-205ENST00000537869 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.68□□□□□ -0.38
SNHG1-205ENST00000537869 HAX1O00165 279 aa12.67□□□□□ -0.38
SNHG1-205ENST00000537869 EVX2Q03828 476 aa12.67□□□□□ -0.38
SNHG1-205ENST00000537869 ILDR1Q86SU0 546 aaPredicted RBP12.67□□□□□ -0.38
SNHG1-205ENST00000537869 MFSD10Q14728 455 aa12.66□□□□□ -0.38
SNHG1-205ENST00000537869 TRIM35Q9UPQ4 493 aa12.66□□□□□ -0.38
SNHG1-205ENST00000537869 LMOD2Q6P5Q4 547 aa12.65□□□□□ -0.38
SNHG1-205ENST00000537869 DDX27Q96GQ7 796 aaKnown RBP12.64□□□□□ -0.39
SNHG1-205ENST00000537869 SEMA3EO15041 775 aa12.62□□□□□ -0.39
SNHG1-205ENST00000537869 DPY19L2Q6NUT2 758 aa12.61□□□□□ -0.39
SNHG1-205ENST00000537869 TESPA1A2RU30 521 aaPredicted RBP12.58□□□□□ -0.4
SNHG1-205ENST00000537869 TULP1O00294 542 aaPredicted RBP12.57□□□□□ -0.4
SNHG1-205ENST00000537869 CLCN6P51797 869 aa12.57□□□□□ -0.4
SNHG1-205ENST00000537869 ATN1P54259 1190 aaPredicted RBP12.57□□□□□ -0.4
SNHG1-205ENST00000537869 CAMK2BQ13554 666 aa12.56□□□□□ -0.4
SNHG1-205ENST00000537869 GPHNQ9NQX3 736 aaPredicted RBP12.54□□□□□ -0.4
SNHG1-205ENST00000537869 ARIH1Q9Y4X5 557 aaPredicted RBP12.54□□□□□ -0.4
SNHG1-205ENST00000537869 PDCD7Q8N8D1 485 aaKnown RBP12.53□□□□□ -0.4
SNHG1-205ENST00000537869 ATMINO43313 823 aaPredicted RBP12.52□□□□□ -0.41
SNHG1-205ENST00000537869 PPP1R15BQ5SWA1 713 aa12.51□□□□□ -0.41
SNHG1-205ENST00000537869 MICALL2Q8IY33 904 aa12.51□□□□□ -0.41
SNHG1-205ENST00000537869 IRX5P78411 483 aaPredicted RBP12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms