RNA–Protein interactions for RNA: ENST00000537585.1

SRGAP1-203, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 3

Gene SRGAP1, Length 368 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-203ENST00000537585 MS4A3Q96HJ5 214 aa14.32□□□□□ -0.12
SRGAP1-203ENST00000537585 KIF12Q96FN5 646 aa14.25□□□□□ -0.13
SRGAP1-203ENST00000537585 CLCN6P51797 869 aa14.24□□□□□ -0.13
SRGAP1-203ENST00000537585 DCBLD2Q96PD2 775 aa14.24□□□□□ -0.13
SRGAP1-203ENST00000537585 TRPC6Q9Y210 931 aa14.24□□□□□ -0.13
SRGAP1-203ENST00000537585 ZBTB47Q9UFB7 747 aaPredicted RBP14.22□□□□□ -0.13
SRGAP1-203ENST00000537585 MAP3K13O43283 966 aa14.21□□□□□ -0.13
SRGAP1-203ENST00000537585 IFNLR1Q8IU57 520 aaPredicted RBP14.19□□□□□ -0.14
SRGAP1-203ENST00000537585 PELP1Q8IZL8 1130 aaKnown RBP14.19□□□□□ -0.14
SRGAP1-203ENST00000537585 KLHL34Q8N239 644 aa14.16□□□□□ -0.14
SRGAP1-203ENST00000537585 FAM212AQ96EL1 285 aa14.13□□□□□ -0.15
SRGAP1-203ENST00000537585 ATMINO43313 823 aaPredicted RBP14.09□□□□□ -0.15
SRGAP1-203ENST00000537585 DCAF8Q5TAQ9 597 aa14.09□□□□□ -0.15
SRGAP1-203ENST00000537585 LHX8Q68G74 356 aa14.08□□□□□ -0.16
SRGAP1-203ENST00000537585 PYGBP11216 843 aa14.07□□□□□ -0.16
SRGAP1-203ENST00000537585 ASTLQ6HA08 431 aaPredicted RBP14.07□□□□□ -0.16
SRGAP1-203ENST00000537585 BMP2KQ9NSY1 1161 aaPredicted RBP14.07□□□□□ -0.16
SRGAP1-203ENST00000537585 PCDHB13Q9Y5F0 798 aa14.06□□□□□ -0.16
SRGAP1-203ENST00000537585 ATN1P54259 1190 aaPredicted RBP14.05□□□□□ -0.16
SRGAP1-203ENST00000537585 IFNL1Q8IU54 200 aa14.05□□□□□ -0.16
SRGAP1-203ENST00000537585 POTEB2H3BUK9 544 aa14.03□□□□□ -0.16
SRGAP1-203ENST00000537585 SPOCK2Q92563 424 aa13.98□□□□□ -0.17
SRGAP1-203ENST00000537585 TTLL13PA6NNM8 815 aa13.97□□□□□ -0.17
SRGAP1-203ENST00000537585 PCDHB8Q9UN66 801 aa13.96□□□□□ -0.17
SRGAP1-203ENST00000537585 METRNQ9UJH8 293 aa13.95□□□□□ -0.18
SRGAP1-203ENST00000537585 TIE1P35590 1138 aa13.94□□□□□ -0.18
SRGAP1-203ENST00000537585 SGIP1Q9BQI5 828 aa13.93□□□□□ -0.18
SRGAP1-203ENST00000537585 POTEFA5A3E0 1075 aa13.91□□□□□ -0.18
SRGAP1-203ENST00000537585 POTEJP0CG39 1038 aa13.89□□□□□ -0.19
SRGAP1-203ENST00000537585 GSE1Q14687 1217 aa13.89□□□□□ -0.19
SRGAP1-203ENST00000537585 CIZ1Q9ULV3 898 aaPredicted RBP13.89□□□□□ -0.19
SRGAP1-203ENST00000537585 SLC39A7Q92504 469 aa13.87□□□□□ -0.19
SRGAP1-203ENST00000537585 TMEM106CQ9BVX2 250 aa13.87□□□□□ -0.19
SRGAP1-203ENST00000537585 TRIM35Q9UPQ4 493 aa13.87□□□□□ -0.19
SRGAP1-203ENST00000537585 C7P10643 843 aa13.84□□□□□ -0.19
SRGAP1-203ENST00000537585 COLQQ9Y215 455 aaPredicted RBP13.84□□□□□ -0.19
SRGAP1-203ENST00000537585 OTUD5Q96G74 571 aa13.83□□□□□ -0.2
SRGAP1-203ENST00000537585 CHRM1P11229 460 aaPredicted RBP13.79□□□□□ -0.2
SRGAP1-203ENST00000537585 ZNF467Q7Z7K2 595 aaPredicted RBP13.71□□□□□ -0.21
SRGAP1-203ENST00000537585 RNF25Q96BH1 459 aaPredicted RBP13.69□□□□□ -0.22
SRGAP1-203ENST00000537585 PSEN1P49768 467 aa13.68□□□□□ -0.22
SRGAP1-203ENST00000537585 SEC24BO95487 1268 aa13.67□□□□□ -0.22
SRGAP1-203ENST00000537585 IRX5P78411 483 aaPredicted RBP13.66□□□□□ -0.22
SRGAP1-203ENST00000537585 IER5LQ5T953 404 aa13.66□□□□□ -0.22
SRGAP1-203ENST00000537585 PDAP1Q13442 181 aaKnown RBP13.61□□□□□ -0.23
SRGAP1-203ENST00000537585 PLCG2P16885 1265 aa13.58□□□□□ -0.24
SRGAP1-203ENST00000537585 PDCD7Q8N8D1 485 aaKnown RBP13.55□□□□□ -0.24
SRGAP1-203ENST00000537585 CABP2Q9NPB3 220 aa13.55□□□□□ -0.24
SRGAP1-203ENST00000537585 PKD2Q13563 968 aa13.54□□□□□ -0.24
SRGAP1-203ENST00000537585 TRIM41Q8WV44 630 aa13.54□□□□□ -0.24
SRGAP1-203ENST00000537585 OCEL1Q9H607 264 aa13.53□□□□□ -0.24
SRGAP1-203ENST00000537585 RIOK3O14730 519 aaKnown RBP13.51□□□□□ -0.25
SRGAP1-203ENST00000537585 SCUBE2Q9NQ36 999 aa13.5□□□□□ -0.25
SRGAP1-203ENST00000537585 MKRN3Q13064 507 aaKnown RBP13.49□□□□□ -0.25
SRGAP1-203ENST00000537585 MAMSTRQ6ZN01 415 aa13.49□□□□□ -0.25
SRGAP1-203ENST00000537585 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.48□□□□□ -0.25
SRGAP1-203ENST00000537585 GOLGA2Q08379 1002 aa13.48□□□□□ -0.25
SRGAP1-203ENST00000537585 DPY19L2Q6NUT2 758 aa13.48□□□□□ -0.25
SRGAP1-203ENST00000537585 ZFP91Q96JP5 570 aaPredicted RBP13.48□□□□□ -0.25
SRGAP1-203ENST00000537585 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.46□□□□□ -0.25
SRGAP1-203ENST00000537585 EFCAB3Q8N7B9 438 aa13.45□□□□□ -0.26
SRGAP1-203ENST00000537585 RGL2O15211 777 aa13.44□□□□□ -0.26
SRGAP1-203ENST00000537585 ECM2O94769 699 aaPredicted RBP13.44□□□□□ -0.26
SRGAP1-203ENST00000537585 LCE2DQ5TA82 110 aaPredicted RBP13.44□□□□□ -0.26
SRGAP1-203ENST00000537585 ILDR1Q86SU0 546 aaPredicted RBP13.44□□□□□ -0.26
SRGAP1-203ENST00000537585 VGFO15240 615 aaPredicted RBP13.39□□□□□ -0.27
SRGAP1-203ENST00000537585 SLAIN1Q8ND83 568 aa13.38□□□□□ -0.27
SRGAP1-203ENST00000537585 BCL11BQ9C0K0 894 aaPredicted RBP13.33□□□□□ -0.28
SRGAP1-203ENST00000537585 FAM163AQ96GL9 167 aaPredicted RBP13.32□□□□□ -0.28
SRGAP1-203ENST00000537585 MS4A4AQ96JQ5 239 aa13.32□□□□□ -0.28
SRGAP1-203ENST00000537585 PHF8Q9UPP1 1060 aa13.3□□□□□ -0.28
SRGAP1-203ENST00000537585 STK24Q9Y6E0 443 aa13.28□□□□□ -0.28
SRGAP1-203ENST00000537585 POTEMA6NI47 508 aa13.26□□□□□ -0.29
SRGAP1-203ENST00000537585 STK25O00506 426 aa13.26□□□□□ -0.29
SRGAP1-203ENST00000537585 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.26□□□□□ -0.29
SRGAP1-203ENST00000537585 POTEGQ6S5H5 508 aa13.25□□□□□ -0.29
SRGAP1-203ENST00000537585 BOLA1Q9Y3E2 137 aa13.25□□□□□ -0.29
SRGAP1-203ENST00000537585 C3orf67Q6ZVT6 689 aa13.24□□□□□ -0.29
SRGAP1-203ENST00000537585 L3MBTL3Q96JM7 780 aaPredicted RBP13.24□□□□□ -0.29
SRGAP1-203ENST00000537585 MFRPQ9BY79 579 aa13.21□□□□□ -0.29
SRGAP1-203ENST00000537585 FBXO22Q8NEZ5 403 aa13.2□□□□□ -0.3
SRGAP1-203ENST00000537585 SOX12O15370 315 aa13.19□□□□□ -0.3
SRGAP1-203ENST00000537585 ST18O60284 1047 aa13.18□□□□□ -0.3
SRGAP1-203ENST00000537585 TMEM121BQ9BXQ6 578 aaPredicted RBP13.18□□□□□ -0.3
SRGAP1-203ENST00000537585 MICALL2Q8IY33 904 aa13.17□□□□□ -0.3
SRGAP1-203ENST00000537585 TMEM92Q6UXU6 159 aa13.16□□□□□ -0.3
SRGAP1-203ENST00000537585 TAOK2Q9UL54 1235 aa13.12□□□□□ -0.31
SRGAP1-203ENST00000537585 G3V3G9 751 aa13.09□□□□□ -0.31
SRGAP1-203ENST00000537585 NLRP6P59044 892 aa13.09□□□□□ -0.31
SRGAP1-203ENST00000537585 PPP1R37O75864 691 aa13.06□□□□□ -0.32
SRGAP1-203ENST00000537585 MARVELD3Q96A59 401 aa13.06□□□□□ -0.32
SRGAP1-203ENST00000537585 HOXB3P14651 431 aaPredicted RBP13.05□□□□□ -0.32
SRGAP1-203ENST00000537585 HS6ST3Q8IZP7 471 aa13.05□□□□□ -0.32
SRGAP1-203ENST00000537585 CHGAP10645 457 aaKnown RBP13.04□□□□□ -0.32
SRGAP1-203ENST00000537585 NKX1-1Q15270 411 aaPredicted RBP13.01□□□□□ -0.33
SRGAP1-203ENST00000537585 SNPHO15079 494 aa12.97□□□□□ -0.33
SRGAP1-203ENST00000537585 POTEB3A0JP26 581 aa12.95□□□□□ -0.34
SRGAP1-203ENST00000537585 POTEBQ6S5H4 581 aa12.95□□□□□ -0.34
SRGAP1-203ENST00000537585 PLSCR2Q9NRY7 297 aa12.94□□□□□ -0.34
SRGAP1-203ENST00000537585 CDAN1Q8IWY9 1227 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms