RNA–Protein interactions for RNA: ENST00000536634.5

CLIP1-207, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-207ENST00000536634 PAK3O75914 559 aaPredicted RBP15.4■□□□□ 0.06
CLIP1-207ENST00000536634 DCAF8Q5TAQ9 597 aa15.38■□□□□ 0.05
CLIP1-207ENST00000536634 CCDC61Q9Y6R9 512 aa15.35■□□□□ 0.05
CLIP1-207ENST00000536634 CIZ1Q9ULV3 898 aaPredicted RBP15.34■□□□□ 0.05
CLIP1-207ENST00000536634 ZNF579Q8NAF0 562 aaKnown RBP15.32■□□□□ 0.04
CLIP1-207ENST00000536634 PHF12Q96QT6 1004 aa15.32■□□□□ 0.04
CLIP1-207ENST00000536634 GSE1Q14687 1217 aa15.31■□□□□ 0.04
CLIP1-207ENST00000536634 POTEIP0CG38 1075 aa15.3■□□□□ 0.04
CLIP1-207ENST00000536634 PLSCR2Q9NRY7 297 aa15.28■□□□□ 0.04
CLIP1-207ENST00000536634 PYGBP11216 843 aa15.23■□□□□ 0.03
CLIP1-207ENST00000536634 PKD2Q13563 968 aa15.22■□□□□ 0.03
CLIP1-207ENST00000536634 KIF12Q96FN5 646 aa15.21■□□□□ 0.03
CLIP1-207ENST00000536634 CLCN6P51797 869 aa15.19■□□□□ 0.02
CLIP1-207ENST00000536634 MAP3K13O43283 966 aa15.17■□□□□ 0.02
CLIP1-207ENST00000536634 CHRM1P11229 460 aaPredicted RBP15.14■□□□□ 0.01
CLIP1-207ENST00000536634 MS4A3Q96HJ5 214 aa15.13■□□□□ 0.01
CLIP1-207ENST00000536634 RTN4Q9NQC3 1192 aaKnown RBP15.12■□□□□ 0.01
CLIP1-207ENST00000536634 GALR2O43603 387 aaPredicted RBP15.11■□□□□ 0.01
CLIP1-207ENST00000536634 TRIM41Q8WV44 630 aa15.11■□□□□ 0.01
CLIP1-207ENST00000536634 ECM2O94769 699 aaPredicted RBP15.1■□□□□ 0.01
CLIP1-207ENST00000536634 PCDHB13Q9Y5F0 798 aa15.1■□□□□ 0.01
CLIP1-207ENST00000536634 AMER1Q5JTC6 1135 aaPredicted RBP15.09■□□□□ 0.01
CLIP1-207ENST00000536634 IFNL1Q8IU54 200 aa15.06■□□□□ 0
CLIP1-207ENST00000536634 PCDHB8Q9UN66 801 aa15.05■□□□□ -0
CLIP1-207ENST00000536634 RNF25Q96BH1 459 aaPredicted RBP15.04■□□□□ -0
CLIP1-207ENST00000536634 DCBLD2Q96PD2 775 aa15.04■□□□□ -0
CLIP1-207ENST00000536634 SGIP1Q9BQI5 828 aa15.04■□□□□ -0
CLIP1-207ENST00000536634 TRPC6Q9Y210 931 aa15.02■□□□□ -0
CLIP1-207ENST00000536634 RGL2O15211 777 aa15□□□□□ -0.01
CLIP1-207ENST00000536634 ZNF467Q7Z7K2 595 aaPredicted RBP14.97□□□□□ -0.01
CLIP1-207ENST00000536634 RIOK3O14730 519 aaKnown RBP14.94□□□□□ -0.02
CLIP1-207ENST00000536634 OTUD5Q96G74 571 aa14.88□□□□□ -0.03
CLIP1-207ENST00000536634 BMP2KQ9NSY1 1161 aaPredicted RBP14.88□□□□□ -0.03
CLIP1-207ENST00000536634 TIE1P35590 1138 aa14.86□□□□□ -0.03
CLIP1-207ENST00000536634 PSEN1P49768 467 aa14.86□□□□□ -0.03
CLIP1-207ENST00000536634 PDAP1Q13442 181 aaKnown RBP14.85□□□□□ -0.03
CLIP1-207ENST00000536634 TMEM106CQ9BVX2 250 aa14.84□□□□□ -0.03
CLIP1-207ENST00000536634 TTLL13PA6NNM8 815 aa14.83□□□□□ -0.04
CLIP1-207ENST00000536634 VGFO15240 615 aaPredicted RBP14.83□□□□□ -0.04
CLIP1-207ENST00000536634 ATMINO43313 823 aaPredicted RBP14.83□□□□□ -0.04
CLIP1-207ENST00000536634 ASTLQ6HA08 431 aaPredicted RBP14.83□□□□□ -0.04
CLIP1-207ENST00000536634 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.81□□□□□ -0.04
CLIP1-207ENST00000536634 ZFP91Q96JP5 570 aaPredicted RBP14.81□□□□□ -0.04
CLIP1-207ENST00000536634 ATN1P54259 1190 aaPredicted RBP14.8□□□□□ -0.04
CLIP1-207ENST00000536634 POTEMA6NI47 508 aa14.79□□□□□ -0.04
CLIP1-207ENST00000536634 POTEB2H3BUK9 544 aa14.78□□□□□ -0.04
CLIP1-207ENST00000536634 PELP1Q8IZL8 1130 aaKnown RBP14.78□□□□□ -0.04
CLIP1-207ENST00000536634 DCAF8L2P0C7V8 631 aa14.74□□□□□ -0.05
CLIP1-207ENST00000536634 TAOK2Q9UL54 1235 aa14.74□□□□□ -0.05
CLIP1-207ENST00000536634 POTEGQ6S5H5 508 aa14.73□□□□□ -0.05
CLIP1-207ENST00000536634 TRIM35Q9UPQ4 493 aa14.73□□□□□ -0.05
CLIP1-207ENST00000536634 STK25O00506 426 aa14.7□□□□□ -0.06
CLIP1-207ENST00000536634 BCL11BQ9C0K0 894 aaPredicted RBP14.7□□□□□ -0.06
CLIP1-207ENST00000536634 CABP2Q9NPB3 220 aa14.68□□□□□ -0.06
CLIP1-207ENST00000536634 CHGAP10645 457 aaKnown RBP14.67□□□□□ -0.06
CLIP1-207ENST00000536634 PCDH10Q9P2E7 1040 aa14.67□□□□□ -0.06
CLIP1-207ENST00000536634 STK24Q9Y6E0 443 aa14.67□□□□□ -0.06
CLIP1-207ENST00000536634 HS6ST3Q8IZP7 471 aa14.64□□□□□ -0.07
CLIP1-207ENST00000536634 GOLGA2Q08379 1002 aa14.6□□□□□ -0.07
CLIP1-207ENST00000536634 EFCAB3Q8N7B9 438 aa14.6□□□□□ -0.07
CLIP1-207ENST00000536634 SLC39A7Q92504 469 aa14.6□□□□□ -0.07
CLIP1-207ENST00000536634 METRNQ9UJH8 293 aa14.59□□□□□ -0.07
CLIP1-207ENST00000536634 MKRN3Q13064 507 aaKnown RBP14.57□□□□□ -0.08
CLIP1-207ENST00000536634 C7P10643 843 aa14.56□□□□□ -0.08
CLIP1-207ENST00000536634 IER5LQ5T953 404 aa14.56□□□□□ -0.08
CLIP1-207ENST00000536634 POTEFA5A3E0 1075 aa14.54□□□□□ -0.08
CLIP1-207ENST00000536634 COLQQ9Y215 455 aaPredicted RBP14.54□□□□□ -0.08
CLIP1-207ENST00000536634 IRX5P78411 483 aaPredicted RBP14.53□□□□□ -0.08
CLIP1-207ENST00000536634 NKX1-1Q15270 411 aaPredicted RBP14.49□□□□□ -0.09
CLIP1-207ENST00000536634 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.49□□□□□ -0.093e-9■■■■□ 19.5
CLIP1-207ENST00000536634 DNAJC5Q9H3Z4 198 aa14.48□□□□□ -0.09
CLIP1-207ENST00000536634 PHF8Q9UPP1 1060 aa14.48□□□□□ -0.09
CLIP1-207ENST00000536634 SEC24BO95487 1268 aa14.47□□□□□ -0.09
CLIP1-207ENST00000536634 ILDR1Q86SU0 546 aaPredicted RBP14.47□□□□□ -0.09
CLIP1-207ENST00000536634 MFRPQ9BY79 579 aa14.47□□□□□ -0.09
CLIP1-207ENST00000536634 SOX12O15370 315 aa14.46□□□□□ -0.09
CLIP1-207ENST00000536634 PDCD7Q8N8D1 485 aaKnown RBP14.46□□□□□ -0.09
CLIP1-207ENST00000536634 OCEL1Q9H607 264 aa14.46□□□□□ -0.09
CLIP1-207ENST00000536634 PLCG2P16885 1265 aa14.45□□□□□ -0.1
CLIP1-207ENST00000536634 POTEJP0CG39 1038 aa14.43□□□□□ -0.1
CLIP1-207ENST00000536634 FBXO22Q8NEZ5 403 aa14.43□□□□□ -0.1
CLIP1-207ENST00000536634 MS4A4AQ96JQ5 239 aa14.43□□□□□ -0.1
CLIP1-207ENST00000536634 MAMSTRQ6ZN01 415 aa14.42□□□□□ -0.1
CLIP1-207ENST00000536634 DPY19L2Q6NUT2 758 aa14.41□□□□□ -0.1
CLIP1-207ENST00000536634 NLRP6P59044 892 aa14.39□□□□□ -0.11
CLIP1-207ENST00000536634 BBXQ8WY36 941 aaPredicted RBP14.38□□□□□ -0.11
CLIP1-207ENST00000536634 LCE2DQ5TA82 110 aaPredicted RBP14.37□□□□□ -0.11
CLIP1-207ENST00000536634 FAM163AQ96GL9 167 aaPredicted RBP14.33□□□□□ -0.12
CLIP1-207ENST00000536634 GTPBP6O43824 516 aaPredicted RBP14.31□□□□□ -0.12
CLIP1-207ENST00000536634 PPP1R37O75864 691 aa14.29□□□□□ -0.12
CLIP1-207ENST00000536634 SCUBE2Q9NQ36 999 aa14.27□□□□□ -0.13
CLIP1-207ENST00000536634 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.26□□□□□ -0.13
CLIP1-207ENST00000536634 BOLA1Q9Y3E2 137 aa14.24□□□□□ -0.13
CLIP1-207ENST00000536634 L3MBTL3Q96JM7 780 aaPredicted RBP14.23□□□□□ -0.13
CLIP1-207ENST00000536634 RYDENQ9NUL5 291 aaKnown RBP14.22□□□□□ -0.13
CLIP1-207ENST00000536634 PAXIP1Q6ZW49 1069 aaPredicted RBP14.21□□□□□ -0.13
CLIP1-207ENST00000536634 MICALL2Q8IY33 904 aa14.2□□□□□ -0.14
CLIP1-207ENST00000536634 SPRYD3Q8NCJ5 442 aa14.19□□□□□ -0.14
CLIP1-207ENST00000536634 CFAP44Q96MT7 982 aa14.19□□□□□ -0.14
CLIP1-207ENST00000536634 TMEM121BQ9BXQ6 578 aaPredicted RBP14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms