RNA–Protein interactions for RNA: ENST00000535709.5

GYPA-211, Transcript of glycophorin A (MNS blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GYPA, Length 695 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPA-211ENST00000535709 NUBP1P53384 320 aa8.99□□□□□ -0.97
GYPA-211ENST00000535709 GALR2O43603 387 aaPredicted RBP8.98□□□□□ -0.97
GYPA-211ENST00000535709 DCBLD2Q96PD2 775 aa8.98□□□□□ -0.97
GYPA-211ENST00000535709 FAM212AQ96EL1 285 aa8.97□□□□□ -0.97
GYPA-211ENST00000535709 POTEIP0CG38 1075 aa8.95□□□□□ -0.98
GYPA-211ENST00000535709 KIF12Q96FN5 646 aa8.93□□□□□ -0.98
GYPA-211ENST00000535709 MS4A3Q96HJ5 214 aa8.93□□□□□ -0.98
GYPA-211ENST00000535709 AMER1Q5JTC6 1135 aaPredicted RBP8.92□□□□□ -0.98
GYPA-211ENST00000535709 SGIP1Q9BQI5 828 aa8.91□□□□□ -0.98
GYPA-211ENST00000535709 KLHL34Q8N239 644 aa8.9□□□□□ -0.98
GYPA-211ENST00000535709 MAP3K13O43283 966 aa8.87□□□□□ -0.99
GYPA-211ENST00000535709 GSE1Q14687 1217 aa8.86□□□□□ -0.99
GYPA-211ENST00000535709 ASTLQ6HA08 431 aaPredicted RBP8.86□□□□□ -0.99
GYPA-211ENST00000535709 RTN4Q9NQC3 1192 aaKnown RBP8.85□□□□□ -0.99
GYPA-211ENST00000535709 TIE1P35590 1138 aa8.84□□□□□ -0.99
GYPA-211ENST00000535709 DCAF8Q5TAQ9 597 aa8.84□□□□□ -0.99
GYPA-211ENST00000535709 IFNLR1Q8IU57 520 aaPredicted RBP8.84□□□□□ -0.99
GYPA-211ENST00000535709 SPOCK2Q92563 424 aa8.83□□□□□ -1
GYPA-211ENST00000535709 PCDHB13Q9Y5F0 798 aa8.83□□□□□ -1
GYPA-211ENST00000535709 ATMINO43313 823 aaPredicted RBP8.82□□□□□ -1
GYPA-211ENST00000535709 LHX8Q68G74 356 aa8.82□□□□□ -1
GYPA-211ENST00000535709 SLC39A7Q92504 469 aa8.79□□□□□ -1
GYPA-211ENST00000535709 BMP2KQ9NSY1 1161 aaPredicted RBP8.78□□□□□ -1
GYPA-211ENST00000535709 C7P10643 843 aa8.76□□□□□ -1.01
GYPA-211ENST00000535709 PYGBP11216 843 aa8.76□□□□□ -1.01
GYPA-211ENST00000535709 CHRM1P11229 460 aaPredicted RBP8.76□□□□□ -1.01
GYPA-211ENST00000535709 ATN1P54259 1190 aaPredicted RBP8.76□□□□□ -1.01
GYPA-211ENST00000535709 IFNL1Q8IU54 200 aa8.76□□□□□ -1.01
GYPA-211ENST00000535709 PELP1Q8IZL8 1130 aaKnown RBP8.76□□□□□ -1.01
GYPA-211ENST00000535709 TRPC6Q9Y210 931 aa8.76□□□□□ -1.01
GYPA-211ENST00000535709 METRNQ9UJH8 293 aa8.75□□□□□ -1.01
GYPA-211ENST00000535709 TTLL13PA6NNM8 815 aa8.74□□□□□ -1.01
GYPA-211ENST00000535709 ZNF467Q7Z7K2 595 aaPredicted RBP8.74□□□□□ -1.01
GYPA-211ENST00000535709 TRIM41Q8WV44 630 aa8.72□□□□□ -1.01
GYPA-211ENST00000535709 IER5LQ5T953 404 aa8.7□□□□□ -1.02
GYPA-211ENST00000535709 TMEM106CQ9BVX2 250 aa8.69□□□□□ -1.02
GYPA-211ENST00000535709 DAXXQ9UER7 740 aaPredicted RBP8.69□□□□□ -1.02
GYPA-211ENST00000535709 CIZ1Q9ULV3 898 aaPredicted RBP8.69□□□□□ -1.02
GYPA-211ENST00000535709 TRIM35Q9UPQ4 493 aa8.68□□□□□ -1.02
GYPA-211ENST00000535709 PCDHB8Q9UN66 801 aa8.66□□□□□ -1.02
GYPA-211ENST00000535709 POTEB2H3BUK9 544 aa8.63□□□□□ -1.03
GYPA-211ENST00000535709 MAMSTRQ6ZN01 415 aa8.62□□□□□ -1.03
GYPA-211ENST00000535709 POTEFA5A3E0 1075 aa8.61□□□□□ -1.03
GYPA-211ENST00000535709 SEC24BO95487 1268 aa8.61□□□□□ -1.03
GYPA-211ENST00000535709 PDAP1Q13442 181 aaKnown RBP8.61□□□□□ -1.03
GYPA-211ENST00000535709 PSEN1P49768 467 aa8.59□□□□□ -1.03
GYPA-211ENST00000535709 OTUD5Q96G74 571 aa8.59□□□□□ -1.03
GYPA-211ENST00000535709 PLCG2P16885 1265 aa8.57□□□□□ -1.04
GYPA-211ENST00000535709 IRX5P78411 483 aaPredicted RBP8.57□□□□□ -1.04
GYPA-211ENST00000535709 SCUBE2Q9NQ36 999 aa8.57□□□□□ -1.04
GYPA-211ENST00000535709 COLQQ9Y215 455 aaPredicted RBP8.57□□□□□ -1.04
GYPA-211ENST00000535709 POTEJP0CG39 1038 aa8.55□□□□□ -1.04
GYPA-211ENST00000535709 GOLGA2Q08379 1002 aa8.55□□□□□ -1.04
GYPA-211ENST00000535709 MKRN3Q13064 507 aaKnown RBP8.53□□□□□ -1.04
GYPA-211ENST00000535709 OCEL1Q9H607 264 aa8.53□□□□□ -1.04
GYPA-211ENST00000535709 RIOK3O14730 519 aaKnown RBP8.51□□□□□ -1.05
GYPA-211ENST00000535709 VGFO15240 615 aaPredicted RBP8.5□□□□□ -1.05
GYPA-211ENST00000535709 RNF25Q96BH1 459 aaPredicted RBP8.5□□□□□ -1.05
GYPA-211ENST00000535709 TAOK2Q9UL54 1235 aa8.5□□□□□ -1.05
GYPA-211ENST00000535709 ILDR1Q86SU0 546 aaPredicted RBP8.48□□□□□ -1.05
GYPA-211ENST00000535709 PDCD7Q8N8D1 485 aaKnown RBP8.47□□□□□ -1.05
GYPA-211ENST00000535709 CABP2Q9NPB3 220 aa8.47□□□□□ -1.05
GYPA-211ENST00000535709 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.46□□□□□ -1.06
GYPA-211ENST00000535709 ECM2O94769 699 aaPredicted RBP8.45□□□□□ -1.06
GYPA-211ENST00000535709 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.43□□□□□ -1.06
GYPA-211ENST00000535709 PKD2Q13563 968 aa8.43□□□□□ -1.06
GYPA-211ENST00000535709 L3MBTL3Q96JM7 780 aaPredicted RBP8.43□□□□□ -1.06
GYPA-211ENST00000535709 ZFP91Q96JP5 570 aaPredicted RBP8.43□□□□□ -1.06
GYPA-211ENST00000535709 SOX12O15370 315 aa8.39□□□□□ -1.07
GYPA-211ENST00000535709 EFCAB3Q8N7B9 438 aa8.39□□□□□ -1.07
GYPA-211ENST00000535709 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.39□□□□□ -1.07
GYPA-211ENST00000535709 SLAIN1Q8ND83 568 aa8.38□□□□□ -1.07
GYPA-211ENST00000535709 ARXQ96QS3 562 aa8.38□□□□□ -1.07
GYPA-211ENST00000535709 C3orf67Q6ZVT6 689 aa8.37□□□□□ -1.07
GYPA-211ENST00000535709 NISCHQ9Y2I1 1504 aa8.36□□□□□ -1.07
GYPA-211ENST00000535709 G3V3G9 751 aa8.35□□□□□ -1.07
GYPA-211ENST00000535709 RGL2O15211 777 aa8.35□□□□□ -1.07
GYPA-211ENST00000535709 BCL11BQ9C0K0 894 aaPredicted RBP8.35□□□□□ -1.07
GYPA-211ENST00000535709 BOLA1Q9Y3E2 137 aa8.34□□□□□ -1.07
GYPA-211ENST00000535709 STK25O00506 426 aa8.32□□□□□ -1.08
GYPA-211ENST00000535709 DPY19L2Q6NUT2 758 aa8.32□□□□□ -1.08
GYPA-211ENST00000535709 STK24Q9Y6E0 443 aa8.32□□□□□ -1.08
GYPA-211ENST00000535709 SNPHO15079 494 aa8.31□□□□□ -1.08
GYPA-211ENST00000535709 TMEM121BQ9BXQ6 578 aaPredicted RBP8.31□□□□□ -1.08
GYPA-211ENST00000535709 NLRP6P59044 892 aa8.3□□□□□ -1.08
GYPA-211ENST00000535709 LCE2DQ5TA82 110 aaPredicted RBP8.3□□□□□ -1.08
GYPA-211ENST00000535709 PHF8Q9UPP1 1060 aa8.29□□□□□ -1.08
GYPA-211ENST00000535709 POTEMA6NI47 508 aa8.28□□□□□ -1.08
GYPA-211ENST00000535709 MS4A4AQ96JQ5 239 aa8.28□□□□□ -1.08
GYPA-211ENST00000535709 POTEGQ6S5H5 508 aa8.27□□□□□ -1.09
GYPA-211ENST00000535709 FBXO22Q8NEZ5 403 aa8.27□□□□□ -1.09
GYPA-211ENST00000535709 FAM163AQ96GL9 167 aaPredicted RBP8.27□□□□□ -1.09
GYPA-211ENST00000535709 MICALL2Q8IY33 904 aa8.26□□□□□ -1.09
GYPA-211ENST00000535709 BCANQ96GW7 911 aa8.26□□□□□ -1.09
GYPA-211ENST00000535709 HS6ST3Q8IZP7 471 aa8.25□□□□□ -1.09
GYPA-211ENST00000535709 MFRPQ9BY79 579 aa8.25□□□□□ -1.09
GYPA-211ENST00000535709 PCDH10Q9P2E7 1040 aa8.24□□□□□ -1.09
GYPA-211ENST00000535709 PRKCSHP14314 528 aaPredicted RBP8.23□□□□□ -1.09
GYPA-211ENST00000535709 ST18O60284 1047 aa8.22□□□□□ -1.09
GYPA-211ENST00000535709 DNAJC5Q9H3Z4 198 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 6.3 ms