RNA–Protein interactions for RNA: ENST00000535076.5

SNHG1-201, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-201ENST00000535076 POTEIP0CG38 1075 aa9.41□□□□□ -0.9
SNHG1-201ENST00000535076 CCDC61Q9Y6R9 512 aa9.41□□□□□ -0.9
SNHG1-201ENST00000535076 IFNLR1Q8IU57 520 aaPredicted RBP9.39□□□□□ -0.91
SNHG1-201ENST00000535076 PAK3O75914 559 aaPredicted RBP9.38□□□□□ -0.91
SNHG1-201ENST00000535076 MS4A3Q96HJ5 214 aa9.35□□□□□ -0.91
SNHG1-201ENST00000535076 ZBTB47Q9UFB7 747 aaPredicted RBP9.35□□□□□ -0.91
SNHG1-201ENST00000535076 KIF12Q96FN5 646 aa9.34□□□□□ -0.91
SNHG1-201ENST00000535076 KLHL34Q8N239 644 aa9.31□□□□□ -0.92
SNHG1-201ENST00000535076 TRPC6Q9Y210 931 aa9.31□□□□□ -0.92
SNHG1-201ENST00000535076 MAP3K13O43283 966 aa9.3□□□□□ -0.92
SNHG1-201ENST00000535076 CLCN6P51797 869 aa9.29□□□□□ -0.92
SNHG1-201ENST00000535076 SLC24A1O60721 1099 aa9.27□□□□□ -0.93
SNHG1-201ENST00000535076 FAM212AQ96EL1 285 aa9.27□□□□□ -0.93
SNHG1-201ENST00000535076 DCAF8Q5TAQ9 597 aa9.25□□□□□ -0.93
SNHG1-201ENST00000535076 SPOCK2Q92563 424 aa9.24□□□□□ -0.93
SNHG1-201ENST00000535076 DCBLD2Q96PD2 775 aa9.23□□□□□ -0.93
SNHG1-201ENST00000535076 PYGBP11216 843 aa9.22□□□□□ -0.93
SNHG1-201ENST00000535076 ATMINO43313 823 aaPredicted RBP9.2□□□□□ -0.94
SNHG1-201ENST00000535076 IFNL1Q8IU54 200 aa9.2□□□□□ -0.94
SNHG1-201ENST00000535076 ASTLQ6HA08 431 aaPredicted RBP9.19□□□□□ -0.94
SNHG1-201ENST00000535076 BMP2KQ9NSY1 1161 aaPredicted RBP9.19□□□□□ -0.94
SNHG1-201ENST00000535076 PCDHB13Q9Y5F0 798 aa9.19□□□□□ -0.94
SNHG1-201ENST00000535076 ATN1P54259 1190 aaPredicted RBP9.16□□□□□ -0.94
SNHG1-201ENST00000535076 GSE1Q14687 1217 aa9.15□□□□□ -0.94
SNHG1-201ENST00000535076 PCDHB8Q9UN66 801 aa9.15□□□□□ -0.94
SNHG1-201ENST00000535076 SGIP1Q9BQI5 828 aa9.14□□□□□ -0.95
SNHG1-201ENST00000535076 CIZ1Q9ULV3 898 aaPredicted RBP9.14□□□□□ -0.95
SNHG1-201ENST00000535076 TTLL13PA6NNM8 815 aa9.13□□□□□ -0.95
SNHG1-201ENST00000535076 POTEB2H3BUK9 544 aa9.11□□□□□ -0.95
SNHG1-201ENST00000535076 CHRM1P11229 460 aaPredicted RBP9.11□□□□□ -0.95
SNHG1-201ENST00000535076 TIE1P35590 1138 aa9.11□□□□□ -0.95
SNHG1-201ENST00000535076 LHX8Q68G74 356 aa9.09□□□□□ -0.95
SNHG1-201ENST00000535076 POTEFA5A3E0 1075 aa9.08□□□□□ -0.96
SNHG1-201ENST00000535076 TMEM106CQ9BVX2 250 aa9.07□□□□□ -0.96
SNHG1-201ENST00000535076 METRNQ9UJH8 293 aa9.07□□□□□ -0.96
SNHG1-201ENST00000535076 POTEJP0CG39 1038 aa9.05□□□□□ -0.96
SNHG1-201ENST00000535076 TRIM35Q9UPQ4 493 aa9.05□□□□□ -0.96
SNHG1-201ENST00000535076 RNF25Q96BH1 459 aaPredicted RBP9.04□□□□□ -0.96
SNHG1-201ENST00000535076 SLC39A7Q92504 469 aa9.03□□□□□ -0.96
SNHG1-201ENST00000535076 COLQQ9Y215 455 aaPredicted RBP9.03□□□□□ -0.96
SNHG1-201ENST00000535076 C7P10643 843 aa9.02□□□□□ -0.97
SNHG1-201ENST00000535076 ZNF467Q7Z7K2 595 aaPredicted RBP9.01□□□□□ -0.97
SNHG1-201ENST00000535076 PKD2Q13563 968 aa9□□□□□ -0.97
SNHG1-201ENST00000535076 ERICH6Q7L0X2 663 aa9□□□□□ -0.97
SNHG1-201ENST00000535076 PSEN1P49768 467 aa8.99□□□□□ -0.97
SNHG1-201ENST00000535076 OTUD5Q96G74 571 aa8.96□□□□□ -0.98
SNHG1-201ENST00000535076 PDAP1Q13442 181 aaKnown RBP8.95□□□□□ -0.98
SNHG1-201ENST00000535076 TRIM41Q8WV44 630 aa8.95□□□□□ -0.98
SNHG1-201ENST00000535076 IRX5P78411 483 aaPredicted RBP8.94□□□□□ -0.98
SNHG1-201ENST00000535076 IER5LQ5T953 404 aa8.94□□□□□ -0.98
SNHG1-201ENST00000535076 RIOK3O14730 519 aaKnown RBP8.91□□□□□ -0.98
SNHG1-201ENST00000535076 RGL2O15211 777 aa8.9□□□□□ -0.98
SNHG1-201ENST00000535076 ECM2O94769 699 aaPredicted RBP8.89□□□□□ -0.99
SNHG1-201ENST00000535076 PDCD7Q8N8D1 485 aaKnown RBP8.89□□□□□ -0.99
SNHG1-201ENST00000535076 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.88□□□□□ -0.99
SNHG1-201ENST00000535076 SEC24BO95487 1268 aa8.88□□□□□ -0.99
SNHG1-201ENST00000535076 ZFP91Q96JP5 570 aaPredicted RBP8.88□□□□□ -0.99
SNHG1-201ENST00000535076 CABP2Q9NPB3 220 aa8.88□□□□□ -0.99
SNHG1-201ENST00000535076 PLCG2P16885 1265 aa8.85□□□□□ -0.99
SNHG1-201ENST00000535076 ILDR1Q86SU0 546 aaPredicted RBP8.85□□□□□ -0.99
SNHG1-201ENST00000535076 DAXXQ9UER7 740 aaPredicted RBP8.85□□□□□ -0.99
SNHG1-201ENST00000535076 OCEL1Q9H607 264 aa8.84□□□□□ -0.99
SNHG1-201ENST00000535076 VGFO15240 615 aaPredicted RBP8.83□□□□□ -1
SNHG1-201ENST00000535076 EFCAB3Q8N7B9 438 aa8.83□□□□□ -1
SNHG1-201ENST00000535076 MKRN3Q13064 507 aaKnown RBP8.82□□□□□ -1
SNHG1-201ENST00000535076 DPY19L2Q6NUT2 758 aa8.82□□□□□ -1
SNHG1-201ENST00000535076 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.82□□□□□ -1
SNHG1-201ENST00000535076 PRKCSHP14314 528 aaPredicted RBP8.8□□□□□ -1
SNHG1-201ENST00000535076 GOLGA2Q08379 1002 aa8.79□□□□□ -1
SNHG1-201ENST00000535076 BCL11BQ9C0K0 894 aaPredicted RBP8.79□□□□□ -1
SNHG1-201ENST00000535076 MS4A4AQ96JQ5 239 aa8.77□□□□□ -1.01
SNHG1-201ENST00000535076 MAMSTRQ6ZN01 415 aa8.76□□□□□ -1.01
SNHG1-201ENST00000535076 SCUBE2Q9NQ36 999 aa8.75□□□□□ -1.01
SNHG1-201ENST00000535076 PHF8Q9UPP1 1060 aa8.75□□□□□ -1.01
SNHG1-201ENST00000535076 STK24Q9Y6E0 443 aa8.75□□□□□ -1.01
SNHG1-201ENST00000535076 STK25O00506 426 aa8.74□□□□□ -1.01
SNHG1-201ENST00000535076 LCE2DQ5TA82 110 aaPredicted RBP8.73□□□□□ -1.01
SNHG1-201ENST00000535076 FBXO22Q8NEZ5 403 aa8.71□□□□□ -1.02
SNHG1-201ENST00000535076 MFRPQ9BY79 579 aa8.71□□□□□ -1.02
SNHG1-201ENST00000535076 SLAIN1Q8ND83 568 aa8.7□□□□□ -1.02
SNHG1-201ENST00000535076 SOX12O15370 315 aa8.68□□□□□ -1.02
SNHG1-201ENST00000535076 L3MBTL3Q96JM7 780 aaPredicted RBP8.67□□□□□ -1.02
SNHG1-201ENST00000535076 TMEM121BQ9BXQ6 578 aaPredicted RBP8.67□□□□□ -1.02
SNHG1-201ENST00000535076 BOLA1Q9Y3E2 137 aa8.67□□□□□ -1.02
SNHG1-201ENST00000535076 HS6ST3Q8IZP7 471 aa8.66□□□□□ -1.02
SNHG1-201ENST00000535076 TAOK2Q9UL54 1235 aa8.66□□□□□ -1.02
SNHG1-201ENST00000535076 NKX1-1Q15270 411 aaPredicted RBP8.64□□□□□ -1.03
SNHG1-201ENST00000535076 TMEM92Q6UXU6 159 aa8.64□□□□□ -1.03
SNHG1-201ENST00000535076 MICALL2Q8IY33 904 aa8.64□□□□□ -1.03
SNHG1-201ENST00000535076 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.64□□□□□ -1.03
SNHG1-201ENST00000535076 CHGAP10645 457 aaKnown RBP8.62□□□□□ -1.03
SNHG1-201ENST00000535076 NLRP6P59044 892 aa8.62□□□□□ -1.03
SNHG1-201ENST00000535076 C3orf67Q6ZVT6 689 aa8.62□□□□□ -1.03
SNHG1-201ENST00000535076 PPP1R37O75864 691 aa8.61□□□□□ -1.03
SNHG1-201ENST00000535076 FAM163AQ96GL9 167 aaPredicted RBP8.61□□□□□ -1.03
SNHG1-201ENST00000535076 RTN4Q9NQC3 1192 aaKnown RBP8.61□□□□□ -1.03
SNHG1-201ENST00000535076 ST18O60284 1047 aa8.56□□□□□ -1.04
SNHG1-201ENST00000535076 DNAJC5Q9H3Z4 198 aa8.56□□□□□ -1.04
SNHG1-201ENST00000535076 POTEMA6NI47 508 aa8.54□□□□□ -1.04
SNHG1-201ENST00000535076 G3V3G9 751 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms