RNA–Protein interactions for RNA: ENST00000534356.1

CASP4-213, Transcript of caspase 4, humanhuman

TSL 1 (best)

Gene CASP4, Length 771 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-213ENST00000534356 DCAF8L2P0C7V8 631 aa16.93■□□□□ 0.3
CASP4-213ENST00000534356 TSPYL2Q9H2G4 693 aaPredicted RBP16.92■□□□□ 0.3
CASP4-213ENST00000534356 PYGBP11216 843 aa16.83■□□□□ 0.28
CASP4-213ENST00000534356 CHRM1P11229 460 aaPredicted RBP16.81■□□□□ 0.28
CASP4-213ENST00000534356 RNF25Q96BH1 459 aaPredicted RBP16.81■□□□□ 0.28
CASP4-213ENST00000534356 PAK3O75914 559 aaPredicted RBP16.77■□□□□ 0.28
CASP4-213ENST00000534356 CCDC61Q9Y6R9 512 aa16.77■□□□□ 0.28
CASP4-213ENST00000534356 CD44P16070 742 aaKnown RBP16.75■□□□□ 0.27
CASP4-213ENST00000534356 RIOK3O14730 519 aaKnown RBP16.71■□□□□ 0.27
CASP4-213ENST00000534356 ZRANB1Q9UGI0 708 aa16.7■□□□□ 0.26
CASP4-213ENST00000534356 C19orf67A6NJJ6 358 aa16.68■□□□□ 0.26
CASP4-213ENST00000534356 CHGAP10645 457 aaKnown RBP16.62■□□□□ 0.25
CASP4-213ENST00000534356 KIF12Q96FN5 646 aa16.6■□□□□ 0.25
CASP4-213ENST00000534356 VGFO15240 615 aaPredicted RBP16.59■□□□□ 0.25
CASP4-213ENST00000534356 PHF12Q96QT6 1004 aa16.59■□□□□ 0.25
CASP4-213ENST00000534356 TAOK2Q9UL54 1235 aa16.58■□□□□ 0.24
CASP4-213ENST00000534356 PCDHB8Q9UN66 801 aa16.58■□□□□ 0.24
CASP4-213ENST00000534356 PCDHB13Q9Y5F0 798 aa16.58■□□□□ 0.24
CASP4-213ENST00000534356 MAP3K13O43283 966 aa16.57■□□□□ 0.24
CASP4-213ENST00000534356 ZNF467Q7Z7K2 595 aaPredicted RBP16.56■□□□□ 0.24
CASP4-213ENST00000534356 HAX1O00165 279 aa16.55■□□□□ 0.24
CASP4-213ENST00000534356 HS6ST3Q8IZP7 471 aa16.54■□□□□ 0.24
CASP4-213ENST00000534356 BBXQ8WY36 941 aaPredicted RBP16.54■□□□□ 0.24
CASP4-213ENST00000534356 ZNF579Q8NAF0 562 aaKnown RBP16.53■□□□□ 0.24
CASP4-213ENST00000534356 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.52■□□□□ 0.24
CASP4-213ENST00000534356 ZFP91Q96JP5 570 aaPredicted RBP16.52■□□□□ 0.24
CASP4-213ENST00000534356 IFNL1Q8IU54 200 aa16.51■□□□□ 0.23
CASP4-213ENST00000534356 SGIP1Q9BQI5 828 aa16.51■□□□□ 0.23
CASP4-213ENST00000534356 EVX2Q03828 476 aa16.5■□□□□ 0.23
CASP4-213ENST00000534356 STK25O00506 426 aa16.49■□□□□ 0.23
CASP4-213ENST00000534356 PLCB2Q00722 1185 aa16.46■□□□□ 0.23
CASP4-213ENST00000534356 PDAP1Q13442 181 aaKnown RBP16.45■□□□□ 0.22
CASP4-213ENST00000534356 BCL11BQ9C0K0 894 aaPredicted RBP16.44■□□□□ 0.22
CASP4-213ENST00000534356 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.44■□□□□ 0.22
CASP4-213ENST00000534356 SLC24A1O60721 1099 aa16.43■□□□□ 0.22
CASP4-213ENST00000534356 SP7Q8TDD2 431 aaPredicted RBP16.42■□□□□ 0.22
CASP4-213ENST00000534356 STK24Q9Y6E0 443 aa16.42■□□□□ 0.22
CASP4-213ENST00000534356 PSEN1P49768 467 aa16.41■□□□□ 0.22
CASP4-213ENST00000534356 DNAJC5Q9H3Z4 198 aa16.4■□□□□ 0.22
CASP4-213ENST00000534356 MS4A3Q96HJ5 214 aa16.39■□□□□ 0.21
CASP4-213ENST00000534356 NKX1-1Q15270 411 aaPredicted RBP16.36■□□□□ 0.21
CASP4-213ENST00000534356 PAXIP1Q6ZW49 1069 aaPredicted RBP16.36■□□□□ 0.21
CASP4-213ENST00000534356 CFAP44Q96MT7 982 aa16.33■□□□□ 0.2
CASP4-213ENST00000534356 TRPC6Q9Y210 931 aa16.32■□□□□ 0.2
CASP4-213ENST00000534356 SPRYD3Q8NCJ5 442 aa16.3■□□□□ 0.2
CASP4-213ENST00000534356 GALR2O43603 387 aaPredicted RBP16.28■□□□□ 0.2
CASP4-213ENST00000534356 CLCN6P51797 869 aa16.23■□□□□ 0.19
CASP4-213ENST00000534356 HAP1P54257 671 aaPredicted RBP16.22■□□□□ 0.19
CASP4-213ENST00000534356 TMEM106CQ9BVX2 250 aa16.22■□□□□ 0.19
CASP4-213ENST00000534356 CABP2Q9NPB3 220 aa16.22■□□□□ 0.19
CASP4-213ENST00000534356 GTPBP6O43824 516 aaPredicted RBP16.21■□□□□ 0.19
CASP4-213ENST00000534356 TIE1P35590 1138 aa16.17■□□□□ 0.18
CASP4-213ENST00000534356 EFCAB3Q8N7B9 438 aa16.17■□□□□ 0.18
CASP4-213ENST00000534356 TTLL13PA6NNM8 815 aa16.15■□□□□ 0.18
CASP4-213ENST00000534356 GABBR2O75899 941 aa16.15■□□□□ 0.18
CASP4-213ENST00000534356 BMP2KQ9NSY1 1161 aaPredicted RBP16.15■□□□□ 0.18
CASP4-213ENST00000534356 MFRPQ9BY79 579 aa16.11■□□□□ 0.17
CASP4-213ENST00000534356 TSHZ2Q9NRE2 1034 aa16.08■□□□□ 0.16
CASP4-213ENST00000534356 RYDENQ9NUL5 291 aaKnown RBP16.08■□□□□ 0.16
CASP4-213ENST00000534356 GOLGA2Q08379 1002 aa16.07■□□□□ 0.16
CASP4-213ENST00000534356 SOX12O15370 315 aa16.06■□□□□ 0.16
CASP4-213ENST00000534356 PHF8Q9UPP1 1060 aa16.05■□□□□ 0.16
CASP4-213ENST00000534356 TRIM35Q9UPQ4 493 aa16.04■□□□□ 0.16
CASP4-213ENST00000534356 ATMINO43313 823 aaPredicted RBP16.02■□□□□ 0.16
CASP4-213ENST00000534356 FBXO22Q8NEZ5 403 aa16.02■□□□□ 0.16
CASP4-213ENST00000534356 ATN1P54259 1190 aaPredicted RBP16.01■□□□□ 0.15
CASP4-213ENST00000534356 NLRP6P59044 892 aa16.01■□□□□ 0.15
CASP4-213ENST00000534356 MKRN3Q13064 507 aaKnown RBP16.01■□□□□ 0.15
CASP4-213ENST00000534356 ASTLQ6HA08 431 aaPredicted RBP16■□□□□ 0.15
CASP4-213ENST00000534356 VSIG10Q8N0Z9 540 aa15.95■□□□□ 0.14
CASP4-213ENST00000534356 PPP1R37O75864 691 aa15.94■□□□□ 0.14
CASP4-213ENST00000534356 MS4A4AQ96JQ5 239 aa15.94■□□□□ 0.14
CASP4-213ENST00000534356 DCBLD2Q96PD2 775 aa15.94■□□□□ 0.14
CASP4-213ENST00000534356 KDM2AQ9Y2K7 1162 aa15.93■□□□□ 0.14
CASP4-213ENST00000534356 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.9■□□□□ 0.14
CASP4-213ENST00000534356 ILDR1Q86SU0 546 aaPredicted RBP15.88■□□□□ 0.13
CASP4-213ENST00000534356 PELP1Q8IZL8 1130 aaKnown RBP15.88■□□□□ 0.13
CASP4-213ENST00000534356 POTEIP0CG38 1075 aa15.84■□□□□ 0.13
CASP4-213ENST00000534356 IER5LQ5T953 404 aa15.83■□□□□ 0.12
CASP4-213ENST00000534356 IRX5P78411 483 aaPredicted RBP15.82■□□□□ 0.12
CASP4-213ENST00000534356 CADPS2Q86UW7 1296 aa15.8■□□□□ 0.12
CASP4-213ENST00000534356 DPY19L2Q6NUT2 758 aa15.79■□□□□ 0.12
CASP4-213ENST00000534356 PDCD7Q8N8D1 485 aaKnown RBP15.79■□□□□ 0.12
CASP4-213ENST00000534356 OCEL1Q9H607 264 aa15.77■□□□□ 0.12
CASP4-213ENST00000534356 SLC39A7Q92504 469 aa15.73■□□□□ 0.11
CASP4-213ENST00000534356 PLCG2P16885 1265 aa15.72■□□□□ 0.11
CASP4-213ENST00000534356 COLQQ9Y215 455 aaPredicted RBP15.72■□□□□ 0.11
CASP4-213ENST00000534356 C7P10643 843 aa15.7■□□□□ 0.1
CASP4-213ENST00000534356 SEC24BO95487 1268 aa15.69■□□□□ 0.1
CASP4-213ENST00000534356 POTEFA5A3E0 1075 aa15.68■□□□□ 0.1
CASP4-213ENST00000534356 METRNQ9UJH8 293 aa15.68■□□□□ 0.1
CASP4-213ENST00000534356 MICALL2Q8IY33 904 aa15.63■□□□□ 0.09
CASP4-213ENST00000534356 BOLA1Q9Y3E2 137 aa15.61■□□□□ 0.09
CASP4-213ENST00000534356 NCKAP5LQ9HCH0 1330 aa15.6■□□□□ 0.09
CASP4-213ENST00000534356 TMEM121BQ9BXQ6 578 aaPredicted RBP15.59■□□□□ 0.09
CASP4-213ENST00000534356 L3MBTL3Q96JM7 780 aaPredicted RBP15.57■□□□□ 0.08
CASP4-213ENST00000534356 CRISPLD2Q9H0B8 497 aa15.55■□□□□ 0.08
CASP4-213ENST00000534356 WDR70Q9NW82 654 aa15.55■□□□□ 0.08
CASP4-213ENST00000534356 G3V3G9 751 aa15.54■□□□□ 0.08
CASP4-213ENST00000534356 PDE4AP27815 886 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms