RNA–Protein interactions for RNA: ENST00000534216.5

ATPAF1-211, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 5

Gene ATPAF1, Length 693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-211ENST00000534216 ZRANB1Q9UGI0 708 aa11.68□□□□□ -0.54
ATPAF1-211ENST00000534216 DCAF8Q5TAQ9 597 aa11.67□□□□□ -0.54
ATPAF1-211ENST00000534216 GSE1Q14687 1217 aa11.65□□□□□ -0.54
ATPAF1-211ENST00000534216 CCDC61Q9Y6R9 512 aa11.64□□□□□ -0.55
ATPAF1-211ENST00000534216 CIZ1Q9ULV3 898 aaPredicted RBP11.62□□□□□ -0.55
ATPAF1-211ENST00000534216 ZNF579Q8NAF0 562 aaKnown RBP11.61□□□□□ -0.55
ATPAF1-211ENST00000534216 PHF12Q96QT6 1004 aa11.58□□□□□ -0.56
ATPAF1-211ENST00000534216 PYGBP11216 843 aa11.53□□□□□ -0.56
ATPAF1-211ENST00000534216 PKD2Q13563 968 aa11.53□□□□□ -0.56
ATPAF1-211ENST00000534216 KIF12Q96FN5 646 aa11.53□□□□□ -0.56
ATPAF1-211ENST00000534216 TRIM41Q8WV44 630 aa11.52□□□□□ -0.57
ATPAF1-211ENST00000534216 CHRM1P11229 460 aaPredicted RBP11.5□□□□□ -0.57
ATPAF1-211ENST00000534216 MAP3K13O43283 966 aa11.49□□□□□ -0.57
ATPAF1-211ENST00000534216 CLCN6P51797 869 aa11.49□□□□□ -0.57
ATPAF1-211ENST00000534216 GABBR2O75899 941 aa11.47□□□□□ -0.57
ATPAF1-211ENST00000534216 AMER1Q5JTC6 1135 aaPredicted RBP11.47□□□□□ -0.57
ATPAF1-211ENST00000534216 ECM2O94769 699 aaPredicted RBP11.45□□□□□ -0.58
ATPAF1-211ENST00000534216 SGIP1Q9BQI5 828 aa11.45□□□□□ -0.58
ATPAF1-211ENST00000534216 RTN4Q9NQC3 1192 aaKnown RBP11.45□□□□□ -0.58
ATPAF1-211ENST00000534216 MS4A3Q96HJ5 214 aa11.44□□□□□ -0.58
ATPAF1-211ENST00000534216 PCDHB13Q9Y5F0 798 aa11.44□□□□□ -0.58
ATPAF1-211ENST00000534216 GALR2O43603 387 aaPredicted RBP11.43□□□□□ -0.58
ATPAF1-211ENST00000534216 IFNL1Q8IU54 200 aa11.41□□□□□ -0.58
ATPAF1-211ENST00000534216 ZNF467Q7Z7K2 595 aaPredicted RBP11.38□□□□□ -0.59
ATPAF1-211ENST00000534216 PCDHB8Q9UN66 801 aa11.38□□□□□ -0.59
ATPAF1-211ENST00000534216 RNF25Q96BH1 459 aaPredicted RBP11.37□□□□□ -0.59
ATPAF1-211ENST00000534216 RGL2O15211 777 aa11.35□□□□□ -0.59
ATPAF1-211ENST00000534216 TRPC6Q9Y210 931 aa11.34□□□□□ -0.59
ATPAF1-211ENST00000534216 RIOK3O14730 519 aaKnown RBP11.33□□□□□ -0.6
ATPAF1-211ENST00000534216 TIE1P35590 1138 aa11.28□□□□□ -0.6
ATPAF1-211ENST00000534216 PDAP1Q13442 181 aaKnown RBP11.28□□□□□ -0.6
ATPAF1-211ENST00000534216 DCBLD2Q96PD2 775 aa11.28□□□□□ -0.6
ATPAF1-211ENST00000534216 VGFO15240 615 aaPredicted RBP11.26□□□□□ -0.61
ATPAF1-211ENST00000534216 PSEN1P49768 467 aa11.26□□□□□ -0.61
ATPAF1-211ENST00000534216 BMP2KQ9NSY1 1161 aaPredicted RBP11.26□□□□□ -0.61
ATPAF1-211ENST00000534216 TTLL13PA6NNM8 815 aa11.24□□□□□ -0.61
ATPAF1-211ENST00000534216 POTEIP0CG38 1075 aa11.24□□□□□ -0.61
ATPAF1-211ENST00000534216 TMEM106CQ9BVX2 250 aa11.24□□□□□ -0.61
ATPAF1-211ENST00000534216 TAOK2Q9UL54 1235 aa11.24□□□□□ -0.61
ATPAF1-211ENST00000534216 ATMINO43313 823 aaPredicted RBP11.23□□□□□ -0.61
ATPAF1-211ENST00000534216 ASTLQ6HA08 431 aaPredicted RBP11.23□□□□□ -0.61
ATPAF1-211ENST00000534216 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.21□□□□□ -0.61
ATPAF1-211ENST00000534216 ZFP91Q96JP5 570 aaPredicted RBP11.21□□□□□ -0.61
ATPAF1-211ENST00000534216 ATN1P54259 1190 aaPredicted RBP11.2□□□□□ -0.62
ATPAF1-211ENST00000534216 DCAF8L2P0C7V8 631 aa11.17□□□□□ -0.62
ATPAF1-211ENST00000534216 PELP1Q8IZL8 1130 aaKnown RBP11.16□□□□□ -0.62
ATPAF1-211ENST00000534216 TRIM35Q9UPQ4 493 aa11.16□□□□□ -0.62
ATPAF1-211ENST00000534216 STK25O00506 426 aa11.14□□□□□ -0.63
ATPAF1-211ENST00000534216 BCL11BQ9C0K0 894 aaPredicted RBP11.14□□□□□ -0.63
ATPAF1-211ENST00000534216 POTEMA6NI47 508 aa11.12□□□□□ -0.63
ATPAF1-211ENST00000534216 CHGAP10645 457 aaKnown RBP11.12□□□□□ -0.63
ATPAF1-211ENST00000534216 CABP2Q9NPB3 220 aa11.12□□□□□ -0.63
ATPAF1-211ENST00000534216 STK24Q9Y6E0 443 aa11.12□□□□□ -0.63
ATPAF1-211ENST00000534216 HS6ST3Q8IZP7 471 aa11.11□□□□□ -0.63
ATPAF1-211ENST00000534216 PCDH10Q9P2E7 1040 aa11.1□□□□□ -0.63
ATPAF1-211ENST00000534216 GOLGA2Q08379 1002 aa11.09□□□□□ -0.63
ATPAF1-211ENST00000534216 SLC39A7Q92504 469 aa11.08□□□□□ -0.64
ATPAF1-211ENST00000534216 IER5LQ5T953 404 aa11.07□□□□□ -0.64
ATPAF1-211ENST00000534216 C7P10643 843 aa11.06□□□□□ -0.64
ATPAF1-211ENST00000534216 MKRN3Q13064 507 aaKnown RBP11.06□□□□□ -0.64
ATPAF1-211ENST00000534216 EFCAB3Q8N7B9 438 aa11.06□□□□□ -0.64
ATPAF1-211ENST00000534216 METRNQ9UJH8 293 aa11.05□□□□□ -0.64
ATPAF1-211ENST00000534216 POTEGQ6S5H5 508 aa11.04□□□□□ -0.64
ATPAF1-211ENST00000534216 DNAJC5Q9H3Z4 198 aa11.02□□□□□ -0.65
ATPAF1-211ENST00000534216 IRX5P78411 483 aaPredicted RBP11.01□□□□□ -0.65
ATPAF1-211ENST00000534216 SOX12O15370 315 aa11□□□□□ -0.65
ATPAF1-211ENST00000534216 POTEFA5A3E0 1075 aa10.99□□□□□ -0.65
ATPAF1-211ENST00000534216 COLQQ9Y215 455 aaPredicted RBP10.99□□□□□ -0.65
ATPAF1-211ENST00000534216 SEC24BO95487 1268 aa10.98□□□□□ -0.65
ATPAF1-211ENST00000534216 ILDR1Q86SU0 546 aaPredicted RBP10.98□□□□□ -0.65
ATPAF1-211ENST00000534216 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.98□□□□□ -0.65
ATPAF1-211ENST00000534216 NKX1-1Q15270 411 aaPredicted RBP10.97□□□□□ -0.65
ATPAF1-211ENST00000534216 OCEL1Q9H607 264 aa10.97□□□□□ -0.65
ATPAF1-211ENST00000534216 PLCG2P16885 1265 aa10.96□□□□□ -0.65
ATPAF1-211ENST00000534216 PHF8Q9UPP1 1060 aa10.96□□□□□ -0.65
ATPAF1-211ENST00000534216 PDCD7Q8N8D1 485 aaKnown RBP10.95□□□□□ -0.66
ATPAF1-211ENST00000534216 MFRPQ9BY79 579 aa10.95□□□□□ -0.66
ATPAF1-211ENST00000534216 BBXQ8WY36 941 aaPredicted RBP10.94□□□□□ -0.66
ATPAF1-211ENST00000534216 NLRP6P59044 892 aa10.93□□□□□ -0.66
ATPAF1-211ENST00000534216 FBXO22Q8NEZ5 403 aa10.93□□□□□ -0.66
ATPAF1-211ENST00000534216 MS4A4AQ96JQ5 239 aa10.91□□□□□ -0.66
ATPAF1-211ENST00000534216 POTEB2H3BUK9 544 aa10.89□□□□□ -0.67
ATPAF1-211ENST00000534216 DPY19L2Q6NUT2 758 aa10.88□□□□□ -0.67
ATPAF1-211ENST00000534216 RYDENQ9NUL5 291 aaKnown RBP10.86□□□□□ -0.67
ATPAF1-211ENST00000534216 GTPBP6O43824 516 aaPredicted RBP10.85□□□□□ -0.67
ATPAF1-211ENST00000534216 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.85□□□□□ -0.67
ATPAF1-211ENST00000534216 POTEJP0CG39 1038 aa10.84□□□□□ -0.67
ATPAF1-211ENST00000534216 L3MBTL3Q96JM7 780 aaPredicted RBP10.83□□□□□ -0.68
ATPAF1-211ENST00000534216 OTUD5Q96G74 571 aa10.81□□□□□ -0.68
ATPAF1-211ENST00000534216 PPP1R37O75864 691 aa10.8□□□□□ -0.68
ATPAF1-211ENST00000534216 SPRYD3Q8NCJ5 442 aa10.79□□□□□ -0.68
ATPAF1-211ENST00000534216 BOLA1Q9Y3E2 137 aa10.79□□□□□ -0.68
ATPAF1-211ENST00000534216 PAXIP1Q6ZW49 1069 aaPredicted RBP10.77□□□□□ -0.69
ATPAF1-211ENST00000534216 TMEM121BQ9BXQ6 578 aaPredicted RBP10.77□□□□□ -0.69
ATPAF1-211ENST00000534216 G3V3G9 751 aa10.76□□□□□ -0.69
ATPAF1-211ENST00000534216 MICALL2Q8IY33 904 aa10.76□□□□□ -0.69
ATPAF1-211ENST00000534216 MAMSTRQ6ZN01 415 aa10.75□□□□□ -0.69
ATPAF1-211ENST00000534216 CFAP44Q96MT7 982 aa10.75□□□□□ -0.69
ATPAF1-211ENST00000534216 SCUBE2Q9NQ36 999 aa10.72□□□□□ -0.69
ATPAF1-211ENST00000534216 C3orf67Q6ZVT6 689 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms