RNA–Protein interactions for RNA: ENST00000533928.1

USP33-218, Transcript of ubiquitin specific peptidase 33, humanhuman

TSL 4

Gene USP33, Length 606 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP33-218ENST00000533928 MS4A3Q96HJ5 214 aa10.11□□□□□ -0.79
USP33-218ENST00000533928 CCDC61Q9Y6R9 512 aa10.11□□□□□ -0.79
USP33-218ENST00000533928 RASEFQ8IZ41 740 aa10.09□□□□□ -0.79
USP33-218ENST00000533928 PELP1Q8IZL8 1130 aaKnown RBP10.06□□□□□ -0.8
USP33-218ENST00000533928 KIF12Q96FN5 646 aa10.06□□□□□ -0.8
USP33-218ENST00000533928 ZBTB47Q9UFB7 747 aaPredicted RBP10.06□□□□□ -0.8
USP33-218ENST00000533928 ASTLQ6HA08 431 aaPredicted RBP10.03□□□□□ -0.8
USP33-218ENST00000533928 ATMINO43313 823 aaPredicted RBP10.02□□□□□ -0.81
USP33-218ENST00000533928 MAP3K13O43283 966 aa10□□□□□ -0.81
USP33-218ENST00000533928 NUBP1P53384 320 aa10□□□□□ -0.81
USP33-218ENST00000533928 FBXO3Q9UK99 471 aa10□□□□□ -0.81
USP33-218ENST00000533928 POTEB2H3BUK9 544 aa9.98□□□□□ -0.81
USP33-218ENST00000533928 C7P10643 843 aa9.96□□□□□ -0.82
USP33-218ENST00000533928 SLC39A7Q92504 469 aa9.96□□□□□ -0.82
USP33-218ENST00000533928 METRNQ9UJH8 293 aa9.96□□□□□ -0.82
USP33-218ENST00000533928 ATN1P54259 1190 aaPredicted RBP9.95□□□□□ -0.82
USP33-218ENST00000533928 TRPC6Q9Y210 931 aa9.95□□□□□ -0.82
USP33-218ENST00000533928 FAM212AQ96EL1 285 aa9.93□□□□□ -0.82
USP33-218ENST00000533928 OTUD5Q96G74 571 aa9.93□□□□□ -0.82
USP33-218ENST00000533928 BMP2KQ9NSY1 1161 aaPredicted RBP9.93□□□□□ -0.82
USP33-218ENST00000533928 TIE1P35590 1138 aa9.91□□□□□ -0.82
USP33-218ENST00000533928 SGIP1Q9BQI5 828 aa9.91□□□□□ -0.82
USP33-218ENST00000533928 PCDHB13Q9Y5F0 798 aa9.91□□□□□ -0.82
USP33-218ENST00000533928 DCAF8Q5TAQ9 597 aa9.88□□□□□ -0.83
USP33-218ENST00000533928 TTLL13PA6NNM8 815 aa9.86□□□□□ -0.83
USP33-218ENST00000533928 VASPP50552 380 aaPredicted RBP9.86□□□□□ -0.83
USP33-218ENST00000533928 POTEJP0CG39 1038 aa9.85□□□□□ -0.83
USP33-218ENST00000533928 IFNL1Q8IU54 200 aa9.85□□□□□ -0.83
USP33-218ENST00000533928 KLHL34Q8N239 644 aa9.85□□□□□ -0.83
USP33-218ENST00000533928 POTEFA5A3E0 1075 aa9.81□□□□□ -0.84
USP33-218ENST00000533928 PYGBP11216 843 aa9.81□□□□□ -0.84
USP33-218ENST00000533928 MAMSTRQ6ZN01 415 aa9.81□□□□□ -0.84
USP33-218ENST00000533928 TRIM35Q9UPQ4 493 aa9.8□□□□□ -0.84
USP33-218ENST00000533928 SEC24BO95487 1268 aa9.79□□□□□ -0.84
USP33-218ENST00000533928 TMEM106CQ9BVX2 250 aa9.78□□□□□ -0.84
USP33-218ENST00000533928 COLQQ9Y215 455 aaPredicted RBP9.78□□□□□ -0.84
USP33-218ENST00000533928 IER5LQ5T953 404 aa9.76□□□□□ -0.85
USP33-218ENST00000533928 GSE1Q14687 1217 aa9.75□□□□□ -0.85
USP33-218ENST00000533928 SCUBE2Q9NQ36 999 aa9.75□□□□□ -0.85
USP33-218ENST00000533928 PCDHB8Q9UN66 801 aa9.74□□□□□ -0.85
USP33-218ENST00000533928 IFNLR1Q8IU57 520 aaPredicted RBP9.7□□□□□ -0.86
USP33-218ENST00000533928 SPOCK2Q92563 424 aa9.68□□□□□ -0.86
USP33-218ENST00000533928 CHRM1P11229 460 aaPredicted RBP9.67□□□□□ -0.86
USP33-218ENST00000533928 PLCG2P16885 1265 aa9.66□□□□□ -0.86
USP33-218ENST00000533928 ZNF467Q7Z7K2 595 aaPredicted RBP9.66□□□□□ -0.86
USP33-218ENST00000533928 IRX5P78411 483 aaPredicted RBP9.65□□□□□ -0.86
USP33-218ENST00000533928 POTEMA6NI47 508 aa9.64□□□□□ -0.87
USP33-218ENST00000533928 POTEGQ6S5H5 508 aa9.63□□□□□ -0.87
USP33-218ENST00000533928 FAM163AQ96GL9 167 aaPredicted RBP9.63□□□□□ -0.87
USP33-218ENST00000533928 CIZ1Q9ULV3 898 aaPredicted RBP9.63□□□□□ -0.87
USP33-218ENST00000533928 OCEL1Q9H607 264 aa9.62□□□□□ -0.87
USP33-218ENST00000533928 PSEN1P49768 467 aa9.58□□□□□ -0.88
USP33-218ENST00000533928 GOLGA2Q08379 1002 aa9.57□□□□□ -0.88
USP33-218ENST00000533928 LCE2DQ5TA82 110 aaPredicted RBP9.57□□□□□ -0.88
USP33-218ENST00000533928 SLAIN1Q8ND83 568 aa9.57□□□□□ -0.88
USP33-218ENST00000533928 MKRN3Q13064 507 aaKnown RBP9.55□□□□□ -0.88
USP33-218ENST00000533928 PDAP1Q13442 181 aaKnown RBP9.54□□□□□ -0.88
USP33-218ENST00000533928 PDCD7Q8N8D1 485 aaKnown RBP9.52□□□□□ -0.89
USP33-218ENST00000533928 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.5□□□□□ -0.89
USP33-218ENST00000533928 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.49□□□□□ -0.89
USP33-218ENST00000533928 PCDH10Q9P2E7 1040 aa9.49□□□□□ -0.89
USP33-218ENST00000533928 TRIM41Q8WV44 630 aa9.48□□□□□ -0.89
USP33-218ENST00000533928 L3MBTL3Q96JM7 780 aaPredicted RBP9.47□□□□□ -0.89
USP33-218ENST00000533928 CABP2Q9NPB3 220 aa9.47□□□□□ -0.89
USP33-218ENST00000533928 ST18O60284 1047 aa9.44□□□□□ -0.9
USP33-218ENST00000533928 C3orf67Q6ZVT6 689 aa9.42□□□□□ -0.9
USP33-218ENST00000533928 ILDR1Q86SU0 546 aaPredicted RBP9.42□□□□□ -0.9
USP33-218ENST00000533928 SNPHO15079 494 aa9.41□□□□□ -0.9
USP33-218ENST00000533928 DPY19L2Q6NUT2 758 aa9.41□□□□□ -0.9
USP33-218ENST00000533928 CCDC180Q9P1Z9 1646 aa9.41□□□□□ -0.9
USP33-218ENST00000533928 RIOK3O14730 519 aaKnown RBP9.36□□□□□ -0.91
USP33-218ENST00000533928 CDAN1Q8IWY9 1227 aa9.36□□□□□ -0.91
USP33-218ENST00000533928 EFCAB3Q8N7B9 438 aa9.36□□□□□ -0.91
USP33-218ENST00000533928 G3V3G9 751 aa9.35□□□□□ -0.91
USP33-218ENST00000533928 RNF25Q96BH1 459 aaPredicted RBP9.34□□□□□ -0.91
USP33-218ENST00000533928 BOLA1Q9Y3E2 137 aa9.34□□□□□ -0.91
USP33-218ENST00000533928 TMEM121BQ9BXQ6 578 aaPredicted RBP9.33□□□□□ -0.92
USP33-218ENST00000533928 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.31□□□□□ -0.92
USP33-218ENST00000533928 VGFO15240 615 aaPredicted RBP9.31□□□□□ -0.92
USP33-218ENST00000533928 ZFP91Q96JP5 570 aaPredicted RBP9.31□□□□□ -0.92
USP33-218ENST00000533928 MARVELD3Q96A59 401 aa9.29□□□□□ -0.92
USP33-218ENST00000533928 SOX12O15370 315 aa9.27□□□□□ -0.93
USP33-218ENST00000533928 TAOK2Q9UL54 1235 aa9.23□□□□□ -0.93
USP33-218ENST00000533928 PHF8Q9UPP1 1060 aa9.23□□□□□ -0.93
USP33-218ENST00000533928 EMP3P54852 163 aa9.22□□□□□ -0.93
USP33-218ENST00000533928 MS4A4AQ96JQ5 239 aa9.22□□□□□ -0.93
USP33-218ENST00000533928 ECM2O94769 699 aaPredicted RBP9.21□□□□□ -0.94
USP33-218ENST00000533928 HOXB3P14651 431 aaPredicted RBP9.21□□□□□ -0.94
USP33-218ENST00000533928 MICALL2Q8IY33 904 aa9.21□□□□□ -0.94
USP33-218ENST00000533928 BCL11BQ9C0K0 894 aaPredicted RBP9.21□□□□□ -0.94
USP33-218ENST00000533928 STK24Q9Y6E0 443 aa9.19□□□□□ -0.94
USP33-218ENST00000533928 FAM205CA6NFA0 338 aa9.17□□□□□ -0.94
USP33-218ENST00000533928 NLRP6P59044 892 aa9.17□□□□□ -0.94
USP33-218ENST00000533928 DOK7Q18PE1 504 aa9.17□□□□□ -0.94
USP33-218ENST00000533928 ZNF710Q8N1W2 664 aa9.17□□□□□ -0.94
USP33-218ENST00000533928 STK25O00506 426 aa9.16□□□□□ -0.94
USP33-218ENST00000533928 PKD2Q13563 968 aa9.16□□□□□ -0.94
USP33-218ENST00000533928 TMEM92Q6UXU6 159 aa9.16□□□□□ -0.94
USP33-218ENST00000533928 POTEB3A0JP26 581 aa9.15□□□□□ -0.94
USP33-218ENST00000533928 POTEBQ6S5H4 581 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms