RNA–Protein interactions for RNA: ENST00000533705.5

UBQLN1-206, Transcript of ubiquilin 1, humanhuman

TSL 1 (best)

Gene UBQLN1, Length 6,055 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1-206ENST00000533705 RGL3Q3MIN7 710 aa8.56□□□□□ -1.04
UBQLN1-206ENST00000533705 CCDC180Q9P1Z9 1646 aa8.55□□□□□ -1.04
UBQLN1-206ENST00000533705 RSF1Q96T23 1441 aaPredicted RBP8.55□□□□□ -1.04
UBQLN1-206ENST00000533705 LMOD2Q6P5Q4 547 aa8.53□□□□□ -1.04
UBQLN1-206ENST00000533705 ARXQ96QS3 562 aa8.53□□□□□ -1.04
UBQLN1-206ENST00000533705 MRS2Q9HD23 443 aa8.53□□□□□ -1.04
UBQLN1-206ENST00000533705 FKBP8Q14318 412 aa8.53□□□□□ -1.04
UBQLN1-206ENST00000533705 CFDP1Q9UEE9 299 aaPredicted RBP8.53□□□□□ -1.04
UBQLN1-206ENST00000533705 ACIN1Q9UKV3 1341 aaKnown RBP8.52□□□□□ -1.05
UBQLN1-206ENST00000533705 BAZ1BQ9UIG0 1483 aaKnown RBP8.52□□□□□ -1.05
UBQLN1-206ENST00000533705 EIF4G2P78344 907 aaKnown RBP eCLIP8.51□□□□□ -1.05
UBQLN1-206ENST00000533705 ANP32BQ92688 251 aaKnown RBP8.51□□□□□ -1.05
UBQLN1-206ENST00000533705 HIRIP3Q9BW71 556 aaPredicted RBP8.51□□□□□ -1.05
UBQLN1-206ENST00000533705 PPM1GO15355 546 aaPredicted RBP8.5□□□□□ -1.05
UBQLN1-206ENST00000533705 MYH16Q9H6N6 1097 aa8.5□□□□□ -1.05
UBQLN1-206ENST00000533705 EEA1Q15075 1411 aa8.49□□□□□ -1.05
UBQLN1-206ENST00000533705 CCDC136Q96JN2 1154 aa8.49□□□□□ -1.05
UBQLN1-206ENST00000533705 WRNQ14191 1432 aaPredicted RBP eCLIP8.49□□□□□ -1.05
UBQLN1-206ENST00000533705 KIF27Q86VH2 1401 aa8.49□□□□□ -1.05
UBQLN1-206ENST00000533705 MLECQ14165 292 aa8.49□□□□□ -1.05
UBQLN1-206ENST00000533705 DCAF1Q9Y4B6 1507 aa8.48□□□□□ -1.05
UBQLN1-206ENST00000533705 GOLGA3Q08378 1498 aa8.47□□□□□ -1.05
UBQLN1-206ENST00000533705 POGKQ9P215 609 aa8.47□□□□□ -1.05
UBQLN1-206ENST00000533705 CDCA8Q53HL2 280 aa8.47□□□□□ -1.05
UBQLN1-206ENST00000533705 CFAP53Q96M91 514 aa8.47□□□□□ -1.05
UBQLN1-206ENST00000533705 NACADO15069 1562 aa8.46□□□□□ -1.05
UBQLN1-206ENST00000533705 NPHP1O15259 732 aa8.44□□□□□ -1.06
UBQLN1-206ENST00000533705 KNSTRNQ9Y448 316 aa8.44□□□□□ -1.06
UBQLN1-206ENST00000533705 CEP162Q5TB80 1403 aa8.43□□□□□ -1.06
UBQLN1-206ENST00000533705 CARD11Q9BXL7 1154 aa8.42□□□□□ -1.06
UBQLN1-206ENST00000533705 LAS1LQ9Y4W2 734 aaKnown RBP8.4□□□□□ -1.06
UBQLN1-206ENST00000533705 SENP3-EIF4A1A0A087X0R7 540 aa8.4□□□□□ -1.06
UBQLN1-206ENST00000533705 NEUROD2Q15784 382 aa8.4□□□□□ -1.07
UBQLN1-206ENST00000533705 HDGFP51858 240 aaKnown RBP8.39□□□□□ -1.07
UBQLN1-206ENST00000533705 CEP164Q9UPV0 1460 aa8.39□□□□□ -1.07
UBQLN1-206ENST00000533705 CCNB3Q8WWL7 1395 aa8.39□□□□□ -1.07
UBQLN1-206ENST00000533705 CDK11BP21127 795 aaKnown RBP8.39□□□□□ -1.07
UBQLN1-206ENST00000533705 TNNT2P45379 298 aaPredicted RBP8.39□□□□□ -1.07
UBQLN1-206ENST00000533705 NUDCQ9Y266 331 aa8.39□□□□□ -1.07
UBQLN1-206ENST00000533705 MAPK8IP3Q9UPT6 1336 aa8.38□□□□□ -1.07
UBQLN1-206ENST00000533705 IRX6P78412 446 aaPredicted RBP8.38□□□□□ -1.07
UBQLN1-206ENST00000533705 SOX12O15370 315 aa8.38□□□□□ -1.07
UBQLN1-206ENST00000533705 GGT6Q6P531 493 aa8.37□□□□□ -1.07
UBQLN1-206ENST00000533705 KANK1Q14678 1352 aa8.37□□□□□ -1.07
UBQLN1-206ENST00000533705 TNIKQ9UKE5 1360 aa8.37□□□□□ -1.07
UBQLN1-206ENST00000533705 EIF4G1Q04637 1599 aaKnown RBP8.36□□□□□ -1.07
UBQLN1-206ENST00000533705 MIER1Q8N108 512 aa8.36□□□□□ -1.07
UBQLN1-206ENST00000533705 CARMIL1Q5VZK9 1371 aa8.35□□□□□ -1.07
UBQLN1-206ENST00000533705 U2SURPO15042 1029 aaKnown RBP8.35□□□□□ -1.07
UBQLN1-206ENST00000533705 SAFB2Q14151 953 aaKnown RBP eCLIP8.35□□□□□ -1.07
UBQLN1-206ENST00000533705 BAZ1AQ9NRL2 1556 aaPredicted RBP8.35□□□□□ -1.07
UBQLN1-206ENST00000533705 FTSJ3Q8IY81 847 aaKnown RBP8.34□□□□□ -1.07
UBQLN1-206ENST00000533705 FHAD1B1AJZ9 1412 aa8.34□□□□□ -1.07
UBQLN1-206ENST00000533705 CUX2O14529 1486 aa8.34□□□□□ -1.07
UBQLN1-206ENST00000533705 SRPK2P78362 688 aaKnown RBP8.34□□□□□ -1.07
UBQLN1-206ENST00000533705 TULP1O00294 542 aaPredicted RBP8.33□□□□□ -1.08
UBQLN1-206ENST00000533705 DCAF11Q8TEB1 546 aa8.32□□□□□ -1.08
UBQLN1-206ENST00000533705 NCLP19338 710 aaKnown RBP8.32□□□□□ -1.08
UBQLN1-206ENST00000533705 STK26Q9P289 416 aa8.32□□□□□ -1.08
UBQLN1-206ENST00000533705 BECN1Q14457 450 aa8.31□□□□□ -1.08
UBQLN1-206ENST00000533705 CC2D1BQ5T0F9 858 aaKnown RBP8.31□□□□□ -1.08
UBQLN1-206ENST00000533705 CASC1Q6TDU7 716 aa8.31□□□□□ -1.08
UBQLN1-206ENST00000533705 SIN3AQ96ST3 1273 aa8.31□□□□□ -1.08
UBQLN1-206ENST00000533705 TMF1P82094 1093 aa8.31□□□□□ -1.08
UBQLN1-206ENST00000533705 GOLGA2Q08379 1002 aa8.3□□□□□ -1.08
UBQLN1-206ENST00000533705 OS9Q13438 667 aaPredicted RBP8.3□□□□□ -1.08
UBQLN1-206ENST00000533705 PNNQ9H307 717 aaKnown RBP8.3□□□□□ -1.08
UBQLN1-206ENST00000533705 TAOK2Q9UL54 1235 aa8.3□□□□□ -1.08
UBQLN1-206ENST00000533705 CARMIL2Q6F5E8 1435 aa8.3□□□□□ -1.08
UBQLN1-206ENST00000533705 PAK3O75914 559 aaPredicted RBP8.3□□□□□ -1.08
UBQLN1-206ENST00000533705 PDS5BQ9NTI5 1447 aa8.29□□□□□ -1.08
UBQLN1-206ENST00000533705 NBR1Q14596 966 aa8.29□□□□□ -1.08
UBQLN1-206ENST00000533705 FRAT1Q92837 279 aaPredicted RBP8.29□□□□□ -1.08
UBQLN1-206ENST00000533705 EIF5BO60841 1220 aaKnown RBP8.29□□□□□ -1.08
UBQLN1-206ENST00000533705 CHMP4BQ9H444 224 aaKnown RBP8.28□□□□□ -1.08
UBQLN1-206ENST00000533705 CECR2Q9BXF3 1484 aa8.28□□□□□ -1.08
UBQLN1-206ENST00000533705 GOLGA6L22H0YM25 854 aa8.28□□□□□ -1.08
UBQLN1-206ENST00000533705 CSB-PGBD3P0DP91 1061 aa8.28□□□□□ -1.08
UBQLN1-206ENST00000533705 DDRGK1Q96HY6 314 aa8.27□□□□□ -1.09
UBQLN1-206ENST00000533705 CCDC9Q9Y3X0 531 aaKnown RBP8.27□□□□□ -1.09
UBQLN1-206ENST00000533705 ZRSR1Q15695 479 aaKnown RBP8.27□□□□□ -1.09
UBQLN1-206ENST00000533705 TPRNQ4KMQ1 711 aa8.27□□□□□ -1.09
UBQLN1-206ENST00000533705 EFCAB2Q5VUJ9 269 aa8.27□□□□□ -1.09
UBQLN1-206ENST00000533705 MS4A1P11836 297 aa8.26□□□□□ -1.09
UBQLN1-206ENST00000533705 MORC1Q86VD1 984 aa8.26□□□□□ -1.09
UBQLN1-206ENST00000533705 TDRD9Q8NDG6 1382 aaKnown RBP8.26□□□□□ -1.09
UBQLN1-206ENST00000533705 FGD1P98174 961 aa8.25□□□□□ -1.09
UBQLN1-206ENST00000533705 RTF1Q92541 710 aaKnown RBP8.25□□□□□ -1.09
UBQLN1-206ENST00000533705 HDGFL2Q7Z4V5 671 aaPredicted RBP8.24□□□□□ -1.09
UBQLN1-206ENST00000533705 ZNF330Q9Y3S2 320 aaPredicted RBP8.24□□□□□ -1.09
UBQLN1-206ENST00000533705 SOGA1O94964 1423 aa8.24□□□□□ -1.09
UBQLN1-206ENST00000533705 PKD2Q13563 968 aa8.24□□□□□ -1.09
UBQLN1-206ENST00000533705 KCNJ4P48050 445 aa8.24□□□□□ -1.09
UBQLN1-206ENST00000533705 NAP1L2Q9ULW6 460 aaPredicted RBP8.23□□□□□ -1.09
UBQLN1-206ENST00000533705 ANP32EQ9BTT0 268 aa8.23□□□□□ -1.09
UBQLN1-206ENST00000533705 SUPT16HQ9Y5B9 1047 aaKnown RBP8.23□□□□□ -1.09
UBQLN1-206ENST00000533705 MYO15BQ96JP2 1530 aa8.23□□□□□ -1.09
UBQLN1-206ENST00000533705 KIF3BO15066 747 aa8.23□□□□□ -1.09
UBQLN1-206ENST00000533705 EID1Q9Y6B2 187 aa8.23□□□□□ -1.09
UBQLN1-206ENST00000533705 ISY1Q9ULR0 285 aaKnown RBP8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms