RNA–Protein interactions for RNA: ENST00000532146.1

CELF1-216, Transcript of CUGBP Elav-like family member 1, humanhuman

TSL 3

Gene CELF1, Length 473 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CELF1-216ENST00000532146 KLHL34Q8N239 644 aa9.63□□□□□ -0.87
CELF1-216ENST00000532146 TSPYL2Q9H2G4 693 aaPredicted RBP9.62□□□□□ -0.87
CELF1-216ENST00000532146 ZBTB47Q9UFB7 747 aaPredicted RBP9.62□□□□□ -0.87
CELF1-216ENST00000532146 PHF12Q96QT6 1004 aa9.58□□□□□ -0.88
CELF1-216ENST00000532146 POTEMA6NI47 508 aa9.57□□□□□ -0.88
CELF1-216ENST00000532146 ZNF579Q8NAF0 562 aaKnown RBP9.57□□□□□ -0.88
CELF1-216ENST00000532146 CCDC61Q9Y6R9 512 aa9.55□□□□□ -0.88
CELF1-216ENST00000532146 PAK3O75914 559 aaPredicted RBP9.54□□□□□ -0.88
CELF1-216ENST00000532146 SPOCK2Q92563 424 aa9.53□□□□□ -0.88
CELF1-216ENST00000532146 OTUD5Q96G74 571 aa9.53□□□□□ -0.88
CELF1-216ENST00000532146 POTEGQ6S5H5 508 aa9.52□□□□□ -0.89
CELF1-216ENST00000532146 DCAF8Q5TAQ9 597 aa9.5□□□□□ -0.89
CELF1-216ENST00000532146 FAM212AQ96EL1 285 aa9.49□□□□□ -0.89
CELF1-216ENST00000532146 GALR2O43603 387 aaPredicted RBP9.48□□□□□ -0.89
CELF1-216ENST00000532146 KIF12Q96FN5 646 aa9.47□□□□□ -0.89
CELF1-216ENST00000532146 MAP3K13O43283 966 aa9.45□□□□□ -0.9
CELF1-216ENST00000532146 PCDH10Q9P2E7 1040 aa9.45□□□□□ -0.9
CELF1-216ENST00000532146 MS4A3Q96HJ5 214 aa9.44□□□□□ -0.9
CELF1-216ENST00000532146 POTEB2H3BUK9 544 aa9.43□□□□□ -0.9
CELF1-216ENST00000532146 PYGBP11216 843 aa9.43□□□□□ -0.9
CELF1-216ENST00000532146 CIZ1Q9ULV3 898 aaPredicted RBP9.43□□□□□ -0.9
CELF1-216ENST00000532146 GSE1Q14687 1217 aa9.41□□□□□ -0.9
CELF1-216ENST00000532146 TRPC6Q9Y210 931 aa9.41□□□□□ -0.9
CELF1-216ENST00000532146 IFNL1Q8IU54 200 aa9.36□□□□□ -0.91
CELF1-216ENST00000532146 PCDHB13Q9Y5F0 798 aa9.36□□□□□ -0.91
CELF1-216ENST00000532146 CHRM1P11229 460 aaPredicted RBP9.34□□□□□ -0.91
CELF1-216ENST00000532146 PCDHB8Q9UN66 801 aa9.33□□□□□ -0.92
CELF1-216ENST00000532146 PKD2Q13563 968 aa9.32□□□□□ -0.92
CELF1-216ENST00000532146 SGIP1Q9BQI5 828 aa9.32□□□□□ -0.92
CELF1-216ENST00000532146 PELP1Q8IZL8 1130 aaKnown RBP9.31□□□□□ -0.92
CELF1-216ENST00000532146 BMP2KQ9NSY1 1161 aaPredicted RBP9.3□□□□□ -0.92
CELF1-216ENST00000532146 ATMINO43313 823 aaPredicted RBP9.28□□□□□ -0.92
CELF1-216ENST00000532146 RNF25Q96BH1 459 aaPredicted RBP9.28□□□□□ -0.92
CELF1-216ENST00000532146 ASTLQ6HA08 431 aaPredicted RBP9.27□□□□□ -0.93
CELF1-216ENST00000532146 MAMSTRQ6ZN01 415 aa9.27□□□□□ -0.93
CELF1-216ENST00000532146 METRNQ9UJH8 293 aa9.27□□□□□ -0.93
CELF1-216ENST00000532146 ATN1P54259 1190 aaPredicted RBP9.26□□□□□ -0.93
CELF1-216ENST00000532146 TTLL13PA6NNM8 815 aa9.24□□□□□ -0.93
CELF1-216ENST00000532146 TIE1P35590 1138 aa9.24□□□□□ -0.93
CELF1-216ENST00000532146 TRIM41Q8WV44 630 aa9.24□□□□□ -0.93
CELF1-216ENST00000532146 FAM163AQ96GL9 167 aaPredicted RBP9.24□□□□□ -0.93
CELF1-216ENST00000532146 ECM2O94769 699 aaPredicted RBP9.23□□□□□ -0.93
CELF1-216ENST00000532146 ZNF467Q7Z7K2 595 aaPredicted RBP9.23□□□□□ -0.93
CELF1-216ENST00000532146 SLC39A7Q92504 469 aa9.23□□□□□ -0.93
CELF1-216ENST00000532146 C7P10643 843 aa9.22□□□□□ -0.93
CELF1-216ENST00000532146 TMEM106CQ9BVX2 250 aa9.22□□□□□ -0.93
CELF1-216ENST00000532146 RGL2O15211 777 aa9.2□□□□□ -0.94
CELF1-216ENST00000532146 PSEN1P49768 467 aa9.2□□□□□ -0.94
CELF1-216ENST00000532146 SCUBE2Q9NQ36 999 aa9.19□□□□□ -0.94
CELF1-216ENST00000532146 POTEJP0CG39 1038 aa9.18□□□□□ -0.94
CELF1-216ENST00000532146 LCE2DQ5TA82 110 aaPredicted RBP9.18□□□□□ -0.94
CELF1-216ENST00000532146 RIOK3O14730 519 aaKnown RBP9.17□□□□□ -0.94
CELF1-216ENST00000532146 TRIM35Q9UPQ4 493 aa9.17□□□□□ -0.94
CELF1-216ENST00000532146 PDAP1Q13442 181 aaKnown RBP9.16□□□□□ -0.94
CELF1-216ENST00000532146 POTEFA5A3E0 1075 aa9.14□□□□□ -0.95
CELF1-216ENST00000532146 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.12□□□□□ -0.95
CELF1-216ENST00000532146 ZFP91Q96JP5 570 aaPredicted RBP9.12□□□□□ -0.95
CELF1-216ENST00000532146 CCDC180Q9P1Z9 1646 aa9.12□□□□□ -0.95
CELF1-216ENST00000532146 COLQQ9Y215 455 aaPredicted RBP9.11□□□□□ -0.95
CELF1-216ENST00000532146 VGFO15240 615 aaPredicted RBP9.1□□□□□ -0.95
CELF1-216ENST00000532146 RTN4Q9NQC3 1192 aaKnown RBP9.1□□□□□ -0.95
CELF1-216ENST00000532146 CDAN1Q8IWY9 1227 aa9.08□□□□□ -0.96
CELF1-216ENST00000532146 CABP2Q9NPB3 220 aa9.08□□□□□ -0.96
CELF1-216ENST00000532146 IRX5P78411 483 aaPredicted RBP9.06□□□□□ -0.96
CELF1-216ENST00000532146 IER5LQ5T953 404 aa9.05□□□□□ -0.96
CELF1-216ENST00000532146 EFCAB3Q8N7B9 438 aa9.04□□□□□ -0.96
CELF1-216ENST00000532146 BCL11BQ9C0K0 894 aaPredicted RBP9.04□□□□□ -0.96
CELF1-216ENST00000532146 MKRN3Q13064 507 aaKnown RBP9.02□□□□□ -0.97
CELF1-216ENST00000532146 STK25O00506 426 aa9.01□□□□□ -0.97
CELF1-216ENST00000532146 SEC24BO95487 1268 aa9.01□□□□□ -0.97
CELF1-216ENST00000532146 AMER1Q5JTC6 1135 aaPredicted RBP9.01□□□□□ -0.97
CELF1-216ENST00000532146 STK24Q9Y6E0 443 aa9.01□□□□□ -0.97
CELF1-216ENST00000532146 GOLGA2Q08379 1002 aa9□□□□□ -0.97
CELF1-216ENST00000532146 ILDR1Q86SU0 546 aaPredicted RBP9□□□□□ -0.97
CELF1-216ENST00000532146 PDCD7Q8N8D1 485 aaKnown RBP9□□□□□ -0.97
CELF1-216ENST00000532146 DPY19L2Q6NUT2 758 aa8.99□□□□□ -0.97
CELF1-216ENST00000532146 OCEL1Q9H607 264 aa8.99□□□□□ -0.97
CELF1-216ENST00000532146 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.99□□□□□ -0.973e-8■□□□□ 10.7
CELF1-216ENST00000532146 PLCG2P16885 1265 aa8.98□□□□□ -0.97
CELF1-216ENST00000532146 TAOK2Q9UL54 1235 aa8.97□□□□□ -0.97
CELF1-216ENST00000532146 CHGAP10645 457 aaKnown RBP8.96□□□□□ -0.98
CELF1-216ENST00000532146 PHF8Q9UPP1 1060 aa8.96□□□□□ -0.98
CELF1-216ENST00000532146 HS6ST3Q8IZP7 471 aa8.94□□□□□ -0.98
CELF1-216ENST00000532146 MS4A4AQ96JQ5 239 aa8.94□□□□□ -0.98
CELF1-216ENST00000532146 MFRPQ9BY79 579 aa8.93□□□□□ -0.98
CELF1-216ENST00000532146 SOX12O15370 315 aa8.92□□□□□ -0.98
CELF1-216ENST00000532146 DCAF8L2P0C7V8 631 aa8.92□□□□□ -0.98
CELF1-216ENST00000532146 FBXO22Q8NEZ5 403 aa8.92□□□□□ -0.98
CELF1-216ENST00000532146 NKX1-1Q15270 411 aaPredicted RBP8.9□□□□□ -0.98
CELF1-216ENST00000532146 MMRN1Q13201 1228 aa8.89□□□□□ -0.99
CELF1-216ENST00000532146 ST18O60284 1047 aa8.88□□□□□ -0.99
CELF1-216ENST00000532146 ZCCHC6Q5VYS8 1495 aaKnown RBP8.88□□□□□ -0.99
CELF1-216ENST00000532146 SLAIN1Q8ND83 568 aa8.87□□□□□ -0.99
CELF1-216ENST00000532146 NLRP6P59044 892 aa8.85□□□□□ -0.99
CELF1-216ENST00000532146 DNAJC5Q9H3Z4 198 aa8.85□□□□□ -0.99
CELF1-216ENST00000532146 PPP1R37O75864 691 aa8.84□□□□□ -0.99
CELF1-216ENST00000532146 SPNS2Q8IVW8 549 aa8.84□□□□□ -0.99
CELF1-216ENST00000532146 BOLA1Q9Y3E2 137 aa8.84□□□□□ -0.99
CELF1-216ENST00000532146 L3MBTL3Q96JM7 780 aaPredicted RBP8.83□□□□□ -1
CELF1-216ENST00000532146 TMEM121BQ9BXQ6 578 aaPredicted RBP8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 119.2 ms