RNA–Protein interactions for RNA: ENST00000531858.1

AC055878.1-201, humanhuman

TSL 3 BASIC

Gene AC055878.1, Length 281 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055878.1-201ENST00000531858 TPRNQ4KMQ1 711 aa8.65□□□□□ -1.02
AC055878.1-201ENST00000531858 DCAF8L2P0C7V8 631 aa8.62□□□□□ -1.03
AC055878.1-201ENST00000531858 VASPP50552 380 aaPredicted RBP8.62□□□□□ -1.03
AC055878.1-201ENST00000531858 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.62□□□□□ -1.03
AC055878.1-201ENST00000531858 PCDH10Q9P2E7 1040 aa8.62□□□□□ -1.03
AC055878.1-201ENST00000531858 PAK3O75914 559 aaPredicted RBP8.61□□□□□ -1.03
AC055878.1-201ENST00000531858 ERICH6Q7L0X2 663 aa8.61□□□□□ -1.03
AC055878.1-201ENST00000531858 POTEB2H3BUK9 544 aa8.6□□□□□ -1.03
AC055878.1-201ENST00000531858 PROM2Q8N271 834 aa8.59□□□□□ -1.03
AC055878.1-201ENST00000531858 BBXQ8WY36 941 aaPredicted RBP8.59□□□□□ -1.03
AC055878.1-201ENST00000531858 CREBZFQ9NS37 354 aa8.58□□□□□ -1.04
AC055878.1-201ENST00000531858 STAG3Q9UJ98 1225 aa8.57□□□□□ -1.04
AC055878.1-201ENST00000531858 SPDYE4A6NLX3 237 aa8.55□□□□□ -1.04
AC055878.1-201ENST00000531858 DAXXQ9UER7 740 aaPredicted RBP8.55□□□□□ -1.04
AC055878.1-201ENST00000531858 PKD2Q13563 968 aa8.54□□□□□ -1.04
AC055878.1-201ENST00000531858 ARXQ96QS3 562 aa8.54□□□□□ -1.04
AC055878.1-201ENST00000531858 PHF12Q96QT6 1004 aa8.53□□□□□ -1.04
AC055878.1-201ENST00000531858 KDM2AQ9Y2K7 1162 aa8.53□□□□□ -1.04
AC055878.1-201ENST00000531858 IFNLR1Q8IU57 520 aaPredicted RBP8.51□□□□□ -1.05
AC055878.1-201ENST00000531858 MAMSTRQ6ZN01 415 aa8.5□□□□□ -1.05
AC055878.1-201ENST00000531858 METRNQ9UJH8 293 aa8.5□□□□□ -1.05
AC055878.1-201ENST00000531858 PELP1Q8IZL8 1130 aaKnown RBP8.49□□□□□ -1.05
AC055878.1-201ENST00000531858 NPM1P06748 294 aaKnown RBP eCLIP8.48□□□□□ -1.05
AC055878.1-201ENST00000531858 C7P10643 843 aa8.48□□□□□ -1.05
AC055878.1-201ENST00000531858 SLC39A7Q92504 469 aa8.48□□□□□ -1.05
AC055878.1-201ENST00000531858 ASTLQ6HA08 431 aaPredicted RBP8.45□□□□□ -1.06
AC055878.1-201ENST00000531858 PAXIP1Q6ZW49 1069 aaPredicted RBP8.44□□□□□ -1.06
AC055878.1-201ENST00000531858 ATMINO43313 823 aaPredicted RBP8.42□□□□□ -1.06
AC055878.1-201ENST00000531858 SCUBE2Q9NQ36 999 aa8.42□□□□□ -1.06
AC055878.1-201ENST00000531858 POTEJP0CG39 1038 aa8.41□□□□□ -1.06
AC055878.1-201ENST00000531858 SPRYD3Q8NCJ5 442 aa8.41□□□□□ -1.06
AC055878.1-201ENST00000531858 FAM163AQ96GL9 167 aaPredicted RBP8.41□□□□□ -1.06
AC055878.1-201ENST00000531858 MS4A3Q96HJ5 214 aa8.41□□□□□ -1.06
AC055878.1-201ENST00000531858 TIMELESSQ9UNS1 1208 aa8.41□□□□□ -1.06
AC055878.1-201ENST00000531858 CFAP44Q96MT7 982 aa8.39□□□□□ -1.07
AC055878.1-201ENST00000531858 GTF3C3Q9Y5Q9 886 aa8.39□□□□□ -1.07
AC055878.1-201ENST00000531858 TULP1O00294 542 aaPredicted RBP8.38□□□□□ -1.07
AC055878.1-201ENST00000531858 NBR1Q14596 966 aa8.38□□□□□ -1.07
AC055878.1-201ENST00000531858 LCE2DQ5TA82 110 aaPredicted RBP8.38□□□□□ -1.07
AC055878.1-201ENST00000531858 ECM2O94769 699 aaPredicted RBP8.36□□□□□ -1.07
AC055878.1-201ENST00000531858 MNX1P50219 401 aaPredicted RBP8.36□□□□□ -1.07
AC055878.1-201ENST00000531858 SPOCK2Q92563 424 aa8.36□□□□□ -1.07
AC055878.1-201ENST00000531858 DNAJC5Q9H3Z4 198 aa8.36□□□□□ -1.07
AC055878.1-201ENST00000531858 TSHZ2Q9NRE2 1034 aa8.31□□□□□ -1.08
AC055878.1-201ENST00000531858 ATN1P54259 1190 aaPredicted RBP8.3□□□□□ -1.08
AC055878.1-201ENST00000531858 TMEM132AQ24JP5 1023 aa8.28□□□□□ -1.08
AC055878.1-201ENST00000531858 HOMEZQ8IX15 550 aa8.28□□□□□ -1.08
AC055878.1-201ENST00000531858 TSPYL2Q9H2G4 693 aaPredicted RBP8.27□□□□□ -1.09
AC055878.1-201ENST00000531858 CDAN1Q8IWY9 1227 aa8.26□□□□□ -1.09
AC055878.1-201ENST00000531858 KLHL34Q8N239 644 aa8.26□□□□□ -1.09
AC055878.1-201ENST00000531858 BMP2KQ9NSY1 1161 aaPredicted RBP8.24□□□□□ -1.09
AC055878.1-201ENST00000531858 CCDC61Q9Y6R9 512 aa8.23□□□□□ -1.09
AC055878.1-201ENST00000531858 POTEFA5A3E0 1075 aa8.22□□□□□ -1.09
AC055878.1-201ENST00000531858 KIF12Q96FN5 646 aa8.22□□□□□ -1.09
AC055878.1-201ENST00000531858 RGL2O15211 777 aa8.21□□□□□ -1.1
AC055878.1-201ENST00000531858 SEC24BO95487 1268 aa8.21□□□□□ -1.1
AC055878.1-201ENST00000531858 TIE1P35590 1138 aa8.21□□□□□ -1.1
AC055878.1-201ENST00000531858 TRIM41Q8WV44 630 aa8.17□□□□□ -1.1
AC055878.1-201ENST00000531858 CHGAP10645 457 aaKnown RBP8.16□□□□□ -1.1
AC055878.1-201ENST00000531858 TRPC6Q9Y210 931 aa8.16□□□□□ -1.1
AC055878.1-201ENST00000531858 COLQQ9Y215 455 aaPredicted RBP8.16□□□□□ -1.1
AC055878.1-201ENST00000531858 MAP3K13O43283 966 aa8.14□□□□□ -1.11
AC055878.1-201ENST00000531858 TTLL13PA6NNM8 815 aa8.13□□□□□ -1.11
AC055878.1-201ENST00000531858 IER5LQ5T953 404 aa8.13□□□□□ -1.11
AC055878.1-201ENST00000531858 C14orf37Q86TY3 774 aa8.13□□□□□ -1.11
AC055878.1-201ENST00000531858 ST18O60284 1047 aa8.12□□□□□ -1.11
AC055878.1-201ENST00000531858 HS6ST3Q8IZP7 471 aa8.12□□□□□ -1.11
AC055878.1-201ENST00000531858 SLAIN1Q8ND83 568 aa8.12□□□□□ -1.11
AC055878.1-201ENST00000531858 PLEKHG5O94827 1062 aa8.11□□□□□ -1.11
AC055878.1-201ENST00000531858 MMRN1Q13201 1228 aa8.1□□□□□ -1.11
AC055878.1-201ENST00000531858 TRIM35Q9UPQ4 493 aa8.1□□□□□ -1.11
AC055878.1-201ENST00000531858 PLCD3Q8N3E9 789 aa8.09□□□□□ -1.11
AC055878.1-201ENST00000531858 ZBTB47Q9UFB7 747 aaPredicted RBP8.08□□□□□ -1.12
AC055878.1-201ENST00000531858 SPNS2Q8IVW8 549 aa8.06□□□□□ -1.12
AC055878.1-201ENST00000531858 TMEM121BQ9BXQ6 578 aaPredicted RBP8.06□□□□□ -1.12
AC055878.1-201ENST00000531858 RASEFQ8IZ41 740 aa8.05□□□□□ -1.12
AC055878.1-201ENST00000531858 SGIP1Q9BQI5 828 aa8.05□□□□□ -1.12
AC055878.1-201ENST00000531858 PLCG2P16885 1265 aa8.04□□□□□ -1.12
AC055878.1-201ENST00000531858 PCDHB13Q9Y5F0 798 aa8.03□□□□□ -1.12
AC055878.1-201ENST00000531858 SNPHO15079 494 aa8.01□□□□□ -1.13
AC055878.1-201ENST00000531858 MIER1Q8N108 512 aa8.01□□□□□ -1.13
AC055878.1-201ENST00000531858 CIZ1Q9ULV3 898 aaPredicted RBP8.01□□□□□ -1.13
AC055878.1-201ENST00000531858 P3H3Q8IVL6 736 aa8□□□□□ -1.13
AC055878.1-201ENST00000531858 RYDENQ9NUL5 291 aaKnown RBP7.98□□□□□ -1.13
AC055878.1-201ENST00000531858 TMEM106CQ9BVX2 250 aa7.97□□□□□ -1.13
AC055878.1-201ENST00000531858 GTPBP6O43824 516 aaPredicted RBP7.95□□□□□ -1.14
AC055878.1-201ENST00000531858 MARVELD3Q96A59 401 aa7.95□□□□□ -1.14
AC055878.1-201ENST00000531858 RANGAP1P46060 587 aaPredicted RBP7.94□□□□□ -1.14
AC055878.1-201ENST00000531858 IRX5P78411 483 aaPredicted RBP7.94□□□□□ -1.14
AC055878.1-201ENST00000531858 GSE1Q14687 1217 aa7.94□□□□□ -1.14
AC055878.1-201ENST00000531858 IFNL1Q8IU54 200 aa7.94□□□□□ -1.14
AC055878.1-201ENST00000531858 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.94□□□□□ -1.14
AC055878.1-201ENST00000531858 OCEL1Q9H607 264 aa7.92□□□□□ -1.14
AC055878.1-201ENST00000531858 NKX1-1Q15270 411 aaPredicted RBP7.91□□□□□ -1.14
AC055878.1-201ENST00000531858 EMP3P54852 163 aa7.89□□□□□ -1.15
AC055878.1-201ENST00000531858 FAM212AQ96EL1 285 aa7.89□□□□□ -1.15
AC055878.1-201ENST00000531858 RIOK3O14730 519 aaKnown RBP7.88□□□□□ -1.15
AC055878.1-201ENST00000531858 NUBP1P53384 320 aa7.87□□□□□ -1.15
AC055878.1-201ENST00000531858 LMOD2Q6P5Q4 547 aa7.87□□□□□ -1.15
AC055878.1-201ENST00000531858 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms