RNA–Protein interactions for RNA: ENST00000531695.1

CHD7-210, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 507 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-210ENST00000531695 MYO15BQ96JP2 1530 aa9.92□□□□□ -0.82
CHD7-210ENST00000531695 MIER1Q8N108 512 aa9.91□□□□□ -0.82
CHD7-210ENST00000531695 MS4A3Q96HJ5 214 aa9.9□□□□□ -0.82
CHD7-210ENST00000531695 PLEKHG5O94827 1062 aa9.89□□□□□ -0.83
CHD7-210ENST00000531695 KIF12Q96FN5 646 aa9.89□□□□□ -0.83
CHD7-210ENST00000531695 FKBP8Q14318 412 aa9.88□□□□□ -0.83
CHD7-210ENST00000531695 PELP1Q8IZL8 1130 aaKnown RBP9.88□□□□□ -0.83
CHD7-210ENST00000531695 RASEFQ8IZ41 740 aa9.87□□□□□ -0.83
CHD7-210ENST00000531695 ATMINO43313 823 aaPredicted RBP9.86□□□□□ -0.83
CHD7-210ENST00000531695 TSPYL2Q9H2G4 693 aaPredicted RBP9.86□□□□□ -0.83
CHD7-210ENST00000531695 POTEB2H3BUK9 544 aa9.85□□□□□ -0.83
CHD7-210ENST00000531695 SUPT5HO00267 1087 aaKnown RBP9.85□□□□□ -0.83
CHD7-210ENST00000531695 NUBP1P53384 320 aa9.84□□□□□ -0.83
CHD7-210ENST00000531695 ZBTB47Q9UFB7 747 aaPredicted RBP9.83□□□□□ -0.84
CHD7-210ENST00000531695 ABCC9O60706 1549 aa9.82□□□□□ -0.84
CHD7-210ENST00000531695 SGIP1Q9BQI5 828 aa9.81□□□□□ -0.84
CHD7-210ENST00000531695 PLCD3Q8N3E9 789 aa9.8□□□□□ -0.84
CHD7-210ENST00000531695 OTUD5Q96G74 571 aa9.8□□□□□ -0.84
CHD7-210ENST00000531695 C7P10643 843 aa9.79□□□□□ -0.84
CHD7-210ENST00000531695 SLC39A7Q92504 469 aa9.79□□□□□ -0.84
CHD7-210ENST00000531695 MAP3K13O43283 966 aa9.78□□□□□ -0.84
CHD7-210ENST00000531695 TIE1P35590 1138 aa9.77□□□□□ -0.85
CHD7-210ENST00000531695 ATN1P54259 1190 aaPredicted RBP9.76□□□□□ -0.85
CHD7-210ENST00000531695 METRNQ9UJH8 293 aa9.75□□□□□ -0.85
CHD7-210ENST00000531695 FBXO3Q9UK99 471 aa9.75□□□□□ -0.85
CHD7-210ENST00000531695 BMP2KQ9NSY1 1161 aaPredicted RBP9.74□□□□□ -0.85
CHD7-210ENST00000531695 TRPC6Q9Y210 931 aa9.74□□□□□ -0.85
CHD7-210ENST00000531695 POTEJP0CG39 1038 aa9.73□□□□□ -0.85
CHD7-210ENST00000531695 POTEFA5A3E0 1075 aa9.7□□□□□ -0.86
CHD7-210ENST00000531695 NACADO15069 1562 aa9.67□□□□□ -0.86
CHD7-210ENST00000531695 TTLL13PA6NNM8 815 aa9.67□□□□□ -0.86
CHD7-210ENST00000531695 DCAF8L2P0C7V8 631 aa9.67□□□□□ -0.86
CHD7-210ENST00000531695 FAM212AQ96EL1 285 aa9.67□□□□□ -0.86
CHD7-210ENST00000531695 PCDHB13Q9Y5F0 798 aa9.65□□□□□ -0.86
CHD7-210ENST00000531695 IER5LQ5T953 404 aa9.64□□□□□ -0.87
CHD7-210ENST00000531695 IFNL1Q8IU54 200 aa9.64□□□□□ -0.87
CHD7-210ENST00000531695 SCRIBQ14160 1630 aa9.64□□□□□ -0.87
CHD7-210ENST00000531695 MAMSTRQ6ZN01 415 aa9.63□□□□□ -0.87
CHD7-210ENST00000531695 VASPP50552 380 aaPredicted RBP9.61□□□□□ -0.87
CHD7-210ENST00000531695 RSF1Q96T23 1441 aaPredicted RBP9.61□□□□□ -0.87
CHD7-210ENST00000531695 RB1CC1Q8TDY2 1594 aa9.58□□□□□ -0.88
CHD7-210ENST00000531695 TRIM35Q9UPQ4 493 aa9.58□□□□□ -0.88
CHD7-210ENST00000531695 COLQQ9Y215 455 aaPredicted RBP9.58□□□□□ -0.88
CHD7-210ENST00000531695 CHRM1P11229 460 aaPredicted RBP9.56□□□□□ -0.88
CHD7-210ENST00000531695 DCAF8Q5TAQ9 597 aa9.55□□□□□ -0.88
CHD7-210ENST00000531695 GSE1Q14687 1217 aa9.53□□□□□ -0.88
CHD7-210ENST00000531695 SCUBE2Q9NQ36 999 aa9.53□□□□□ -0.88
CHD7-210ENST00000531695 PYGBP11216 843 aa9.52□□□□□ -0.89
CHD7-210ENST00000531695 TMEM106CQ9BVX2 250 aa9.52□□□□□ -0.89
CHD7-210ENST00000531695 IRX5P78411 483 aaPredicted RBP9.51□□□□□ -0.89
CHD7-210ENST00000531695 LCE2DQ5TA82 110 aaPredicted RBP9.5□□□□□ -0.89
CHD7-210ENST00000531695 SEC24BO95487 1268 aa9.49□□□□□ -0.89
CHD7-210ENST00000531695 IFNLR1Q8IU57 520 aaPredicted RBP9.49□□□□□ -0.89
CHD7-210ENST00000531695 HRCP23327 699 aa9.48□□□□□ -0.89
CHD7-210ENST00000531695 KLHL34Q8N239 644 aa9.47□□□□□ -0.89
CHD7-210ENST00000531695 POTEMA6NI47 508 aa9.46□□□□□ -0.9
CHD7-210ENST00000531695 PCDHB8Q9UN66 801 aa9.46□□□□□ -0.9
CHD7-210ENST00000531695 ZNF467Q7Z7K2 595 aaPredicted RBP9.45□□□□□ -0.9
CHD7-210ENST00000531695 BAZ1AQ9NRL2 1556 aaPredicted RBP9.45□□□□□ -0.9
CHD7-210ENST00000531695 EIF4G1Q04637 1599 aaKnown RBP9.44□□□□□ -0.9
CHD7-210ENST00000531695 MROH2BQ7Z745 1585 aa9.44□□□□□ -0.9
CHD7-210ENST00000531695 POTEGQ6S5H5 508 aa9.43□□□□□ -0.9
CHD7-210ENST00000531695 OCEL1Q9H607 264 aa9.43□□□□□ -0.9
CHD7-210ENST00000531695 PCDH10Q9P2E7 1040 aa9.43□□□□□ -0.9
CHD7-210ENST00000531695 CECR2Q9BXF3 1484 aa9.41□□□□□ -0.9
CHD7-210ENST00000531695 ILDR1Q86SU0 546 aaPredicted RBP9.41□□□□□ -0.9
CHD7-210ENST00000531695 SPOCK2Q92563 424 aa9.41□□□□□ -0.9
CHD7-210ENST00000531695 PLCG2P16885 1265 aa9.4□□□□□ -0.9
CHD7-210ENST00000531695 WIZO95785 1651 aa9.39□□□□□ -0.91
CHD7-210ENST00000531695 UNC13AQ9UPW8 1703 aa9.37□□□□□ -0.91
CHD7-210ENST00000531695 PDCD7Q8N8D1 485 aaKnown RBP9.37□□□□□ -0.91
CHD7-210ENST00000531695 PSEN1P49768 467 aa9.34□□□□□ -0.91
CHD7-210ENST00000531695 TOP2AP11388 1531 aaKnown RBP9.33□□□□□ -0.92
CHD7-210ENST00000531695 FAM163AQ96GL9 167 aaPredicted RBP9.33□□□□□ -0.92
CHD7-210ENST00000531695 SMARCA4P51532 1647 aa9.33□□□□□ -0.92
CHD7-210ENST00000531695 LOC105371045A0A1W2PR82 267 aa9.32□□□□□ -0.92
CHD7-210ENST00000531695 PDAP1Q13442 181 aaKnown RBP9.32□□□□□ -0.92
CHD7-210ENST00000531695 SLAIN1Q8ND83 568 aa9.31□□□□□ -0.92
CHD7-210ENST00000531695 PCGF6Q9BYE7 350 aa9.31□□□□□ -0.92
CHD7-210ENST00000531695 TRIM41Q8WV44 630 aa9.3□□□□□ -0.92
CHD7-210ENST00000531695 TRIM26Q12899 539 aaPredicted RBP9.28□□□□□ -0.92
CHD7-210ENST00000531695 MKRN3Q13064 507 aaKnown RBP9.28□□□□□ -0.92
CHD7-210ENST00000531695 SMARCA2P51531 1590 aa9.26□□□□□ -0.93
CHD7-210ENST00000531695 ST18O60284 1047 aa9.26□□□□□ -0.93
CHD7-210ENST00000531695 L3MBTL3Q96JM7 780 aaPredicted RBP9.26□□□□□ -0.93
CHD7-210ENST00000531695 CIZ1Q9ULV3 898 aaPredicted RBP9.26□□□□□ -0.93
CHD7-210ENST00000531695 PLSCR2Q9NRY7 297 aa9.25□□□□□ -0.93
CHD7-210ENST00000531695 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.25□□□□□ -0.93
CHD7-210ENST00000531695 PEG3Q9GZU2 1588 aa9.24□□□□□ -0.93
CHD7-210ENST00000531695 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.24□□□□□ -0.933e-6■■■□□ 16.2
CHD7-210ENST00000531695 GOLGA2Q08379 1002 aa9.23□□□□□ -0.93
CHD7-210ENST00000531695 BICRAQ9NZM4 1560 aa9.22□□□□□ -0.93
CHD7-210ENST00000531695 TMEM121BQ9BXQ6 578 aaPredicted RBP9.22□□□□□ -0.93
CHD7-210ENST00000531695 SNPHO15079 494 aa9.21□□□□□ -0.94
CHD7-210ENST00000531695 CABP2Q9NPB3 220 aa9.19□□□□□ -0.94
CHD7-210ENST00000531695 CCDC88BA6NC98 1476 aa9.19□□□□□ -0.94
CHD7-210ENST00000531695 DPY19L2Q6NUT2 758 aa9.17□□□□□ -0.94
CHD7-210ENST00000531695 CDAN1Q8IWY9 1227 aa9.16□□□□□ -0.94
CHD7-210ENST00000531695 RNF25Q96BH1 459 aaPredicted RBP9.16□□□□□ -0.94
CHD7-210ENST00000531695 ZEB1P37275 1124 aaPredicted RBP9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms