RNA–Protein interactions for RNA: ENST00000531637.5

USP33-217, Transcript of ubiquitin specific peptidase 33, humanhuman

TSL 3

Gene USP33, Length 384 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP33-217ENST00000531637 DCAF8Q5TAQ9 597 aa12.82□□□□□ -0.36
USP33-217ENST00000531637 CREBZFQ9NS37 354 aa12.81□□□□□ -0.36
USP33-217ENST00000531637 HS6ST3Q8IZP7 471 aa12.8□□□□□ -0.36
USP33-217ENST00000531637 BCANQ96GW7 911 aa12.79□□□□□ -0.36
USP33-217ENST00000531637 RIOK3O14730 519 aaKnown RBP12.75□□□□□ -0.37
USP33-217ENST00000531637 MNX1P50219 401 aaPredicted RBP12.72□□□□□ -0.37
USP33-217ENST00000531637 DNAJC5Q9H3Z4 198 aa12.71□□□□□ -0.37
USP33-217ENST00000531637 PITPNM1O00562 1244 aa12.7□□□□□ -0.38
USP33-217ENST00000531637 CHRM1P11229 460 aaPredicted RBP12.7□□□□□ -0.38
USP33-217ENST00000531637 RNF25Q96BH1 459 aaPredicted RBP12.69□□□□□ -0.38
USP33-217ENST00000531637 VGFO15240 615 aaPredicted RBP12.68□□□□□ -0.38
USP33-217ENST00000531637 RASEFQ8IZ41 740 aa12.64□□□□□ -0.39
USP33-217ENST00000531637 KDM2AQ9Y2K7 1162 aa12.62□□□□□ -0.39
USP33-217ENST00000531637 STK25O00506 426 aa12.6□□□□□ -0.39
USP33-217ENST00000531637 SGIP1Q9BQI5 828 aa12.6□□□□□ -0.39
USP33-217ENST00000531637 TSHZ2Q9NRE2 1034 aa12.59□□□□□ -0.39
USP33-217ENST00000531637 RYDENQ9NUL5 291 aaKnown RBP12.59□□□□□ -0.39
USP33-217ENST00000531637 PYGBP11216 843 aa12.53□□□□□ -0.4
USP33-217ENST00000531637 STK24Q9Y6E0 443 aa12.5□□□□□ -0.41
USP33-217ENST00000531637 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.49□□□□□ -0.41
USP33-217ENST00000531637 ZNF467Q7Z7K2 595 aaPredicted RBP12.49□□□□□ -0.41
USP33-217ENST00000531637 ZFP91Q96JP5 570 aaPredicted RBP12.49□□□□□ -0.41
USP33-217ENST00000531637 BCL11BQ9C0K0 894 aaPredicted RBP12.49□□□□□ -0.41
USP33-217ENST00000531637 NKX1-1Q15270 411 aaPredicted RBP12.48□□□□□ -0.41
USP33-217ENST00000531637 FARP1Q9Y4F1 1045 aaPredicted RBP12.48□□□□□ -0.41
USP33-217ENST00000531637 GTPBP6O43824 516 aaPredicted RBP12.46□□□□□ -0.41
USP33-217ENST00000531637 CHADLQ6NUI6 762 aa12.46□□□□□ -0.41
USP33-217ENST00000531637 TSPYL2Q9H2G4 693 aaPredicted RBP12.44□□□□□ -0.42
USP33-217ENST00000531637 PAK3O75914 559 aaPredicted RBP12.42□□□□□ -0.42
USP33-217ENST00000531637 PRKAR2AP13861 404 aaKnown RBP12.42□□□□□ -0.42
USP33-217ENST00000531637 NBR1Q14596 966 aa12.42□□□□□ -0.42
USP33-217ENST00000531637 PDAP1Q13442 181 aaKnown RBP12.39□□□□□ -0.43
USP33-217ENST00000531637 FXR2P51116 673 aaKnown RBP eCLIP12.36□□□□□ -0.43
USP33-217ENST00000531637 ZNF579Q8NAF0 562 aaKnown RBP12.34□□□□□ -0.43
USP33-217ENST00000531637 CCDC61Q9Y6R9 512 aa12.33□□□□□ -0.44
USP33-217ENST00000531637 TPRNQ4KMQ1 711 aa12.28□□□□□ -0.44
USP33-217ENST00000531637 PSEN1P49768 467 aa12.27□□□□□ -0.45
USP33-217ENST00000531637 CHRDL2Q6WN34 429 aa12.27□□□□□ -0.45
USP33-217ENST00000531637 PCDHB8Q9UN66 801 aa12.27□□□□□ -0.45
USP33-217ENST00000531637 PCDHB13Q9Y5F0 798 aa12.27□□□□□ -0.45
USP33-217ENST00000531637 PRKCSHP14314 528 aaPredicted RBP12.25□□□□□ -0.45
USP33-217ENST00000531637 P3H3Q8IVL6 736 aa12.24□□□□□ -0.45
USP33-217ENST00000531637 PIP4P2Q8N4L2 257 aa12.21□□□□□ -0.45
USP33-217ENST00000531637 WDR70Q9NW82 654 aa12.19□□□□□ -0.46
USP33-217ENST00000531637 KIF12Q96FN5 646 aa12.17□□□□□ -0.46
USP33-217ENST00000531637 IFNL1Q8IU54 200 aa12.16□□□□□ -0.46
USP33-217ENST00000531637 SOX12O15370 315 aa12.15□□□□□ -0.46
USP33-217ENST00000531637 MAP3K13O43283 966 aa12.15□□□□□ -0.46
USP33-217ENST00000531637 NLRP6P59044 892 aa12.14□□□□□ -0.47
USP33-217ENST00000531637 MFRPQ9BY79 579 aa12.14□□□□□ -0.47
USP33-217ENST00000531637 ZRANB1Q9UGI0 708 aa12.13□□□□□ -0.47
USP33-217ENST00000531637 CD44P16070 742 aaKnown RBP12.11□□□□□ -0.47
USP33-217ENST00000531637 CABP2Q9NPB3 220 aa12.11□□□□□ -0.47
USP33-217ENST00000531637 EFCAB3Q8N7B9 438 aa12.08□□□□□ -0.48
USP33-217ENST00000531637 GOLGA2Q08379 1002 aa12.06□□□□□ -0.48
USP33-217ENST00000531637 CADPS2Q86UW7 1296 aa12.04□□□□□ -0.48
USP33-217ENST00000531637 FBXO22Q8NEZ5 403 aa12.03□□□□□ -0.48
USP33-217ENST00000531637 PHF8Q9UPP1 1060 aa12.01□□□□□ -0.49
USP33-217ENST00000531637 TULP1O00294 542 aaPredicted RBP12□□□□□ -0.49
USP33-217ENST00000531637 PHF12Q96QT6 1004 aa12□□□□□ -0.49
USP33-217ENST00000531637 KCNV2Q8TDN2 545 aa11.99□□□□□ -0.49
USP33-217ENST00000531637 TMEM106CQ9BVX2 250 aa11.96□□□□□ -0.49
USP33-217ENST00000531637 PPP1R37O75864 691 aa11.95□□□□□ -0.5
USP33-217ENST00000531637 MKRN3Q13064 507 aaKnown RBP11.95□□□□□ -0.5
USP33-217ENST00000531637 ARHGEF1Q92888 912 aaKnown RBP11.94□□□□□ -0.5
USP33-217ENST00000531637 C19orf67A6NJJ6 358 aa11.92□□□□□ -0.5
USP33-217ENST00000531637 E2F4Q16254 413 aa11.92□□□□□ -0.5
USP33-217ENST00000531637 PDE4AP27815 886 aa11.9□□□□□ -0.5
USP33-217ENST00000531637 TIE1P35590 1138 aa11.9□□□□□ -0.5
USP33-217ENST00000531637 MS4A3Q96HJ5 214 aa11.9□□□□□ -0.5
USP33-217ENST00000531637 CLCN6P51797 869 aa11.87□□□□□ -0.51
USP33-217ENST00000531637 MS4A4AQ96JQ5 239 aa11.85□□□□□ -0.51
USP33-217ENST00000531637 LMOD2Q6P5Q4 547 aa11.84□□□□□ -0.51
USP33-217ENST00000531637 MFSD10Q14728 455 aa11.83□□□□□ -0.52
USP33-217ENST00000531637 LARP6Q9BRS8 491 aaKnown RBP11.83□□□□□ -0.52
USP33-217ENST00000531637 DDX27Q96GQ7 796 aaKnown RBP11.82□□□□□ -0.52
USP33-217ENST00000531637 NCKAP5LQ9HCH0 1330 aa11.82□□□□□ -0.52
USP33-217ENST00000531637 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.81□□□□□ -0.52
USP33-217ENST00000531637 CRISPLD2Q9H0B8 497 aa11.81□□□□□ -0.52
USP33-217ENST00000531637 TTLL13PA6NNM8 815 aa11.8□□□□□ -0.52
USP33-217ENST00000531637 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.79□□□□□ -0.528e-8■■■□□ 19.1
USP33-217ENST00000531637 TRPC6Q9Y210 931 aa11.79□□□□□ -0.52
USP33-217ENST00000531637 SMYD5Q6GMV2 418 aa11.78□□□□□ -0.52
USP33-217ENST00000531637 POTEHQ6S545 545 aa11.76□□□□□ -0.53
USP33-217ENST00000531637 ARIH1Q9Y4X5 557 aaPredicted RBP11.76□□□□□ -0.53
USP33-217ENST00000531637 ILDR1Q86SU0 546 aaPredicted RBP11.75□□□□□ -0.53
USP33-217ENST00000531637 TESPA1A2RU30 521 aaPredicted RBP11.74□□□□□ -0.53
USP33-217ENST00000531637 BMP2KQ9NSY1 1161 aaPredicted RBP11.74□□□□□ -0.53
USP33-217ENST00000531637 TRIM35Q9UPQ4 493 aa11.73□□□□□ -0.53
USP33-217ENST00000531637 CAMK2BQ13554 666 aa11.72□□□□□ -0.53
USP33-217ENST00000531637 SEMA3EO15041 775 aa11.7□□□□□ -0.54
USP33-217ENST00000531637 HAX1O00165 279 aa11.69□□□□□ -0.54
USP33-217ENST00000531637 PPP1R15BQ5SWA1 713 aa11.69□□□□□ -0.54
USP33-217ENST00000531637 GPHNQ9NQX3 736 aaPredicted RBP11.69□□□□□ -0.54
USP33-217ENST00000531637 GALR2O43603 387 aaPredicted RBP11.68□□□□□ -0.54
USP33-217ENST00000531637 G3V3G9 751 aa11.66□□□□□ -0.54
USP33-217ENST00000531637 IER5LQ5T953 404 aa11.65□□□□□ -0.54
USP33-217ENST00000531637 TMC2Q8TDI7 906 aa11.65□□□□□ -0.54
USP33-217ENST00000531637 MICALL2Q8IY33 904 aa11.63□□□□□ -0.55
USP33-217ENST00000531637 ZC3H15Q8WU90 426 aaKnown RBP11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms