RNA–Protein interactions for RNA: ENST00000531556.1

AP004247.1-201, humanhuman

BASIC

Gene AP004247.1, Length 1,289 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP004247.1-201ENST00000531556 PELP1Q8IZL8 1130 aaKnown RBP14.12□□□□□ -0.15
AP004247.1-201ENST00000531556 SLC39A7Q92504 469 aa14.12□□□□□ -0.15
AP004247.1-201ENST00000531556 METRNQ9UJH8 293 aa14.11□□□□□ -0.15
AP004247.1-201ENST00000531556 ATMINO43313 823 aaPredicted RBP14.05□□□□□ -0.16
AP004247.1-201ENST00000531556 MS4A3Q96HJ5 214 aa14.05□□□□□ -0.16
AP004247.1-201ENST00000531556 SCUBE2Q9NQ36 999 aa13.96□□□□□ -0.17
AP004247.1-201ENST00000531556 POTEJP0CG39 1038 aa13.92□□□□□ -0.18
AP004247.1-201ENST00000531556 TSPYL2Q9H2G4 693 aaPredicted RBP13.91□□□□□ -0.18
AP004247.1-201ENST00000531556 CCDC61Q9Y6R9 512 aa13.88□□□□□ -0.19
AP004247.1-201ENST00000531556 ATN1P54259 1190 aaPredicted RBP13.87□□□□□ -0.19
AP004247.1-201ENST00000531556 FAM163AQ96GL9 167 aaPredicted RBP13.85□□□□□ -0.19
AP004247.1-201ENST00000531556 KIF12Q96FN5 646 aa13.84□□□□□ -0.19
AP004247.1-201ENST00000531556 PLEKHG5O94827 1062 aa13.81□□□□□ -0.2
AP004247.1-201ENST00000531556 PROM2Q8N271 834 aa13.8□□□□□ -0.2
AP004247.1-201ENST00000531556 TIE1P35590 1138 aa13.79□□□□□ -0.2
AP004247.1-201ENST00000531556 LCE2DQ5TA82 110 aaPredicted RBP13.79□□□□□ -0.2
AP004247.1-201ENST00000531556 BMP2KQ9NSY1 1161 aaPredicted RBP13.78□□□□□ -0.2
AP004247.1-201ENST00000531556 EHMT2Q96KQ7 1210 aa13.74□□□□□ -0.21
AP004247.1-201ENST00000531556 POTEFA5A3E0 1075 aa13.71□□□□□ -0.21
AP004247.1-201ENST00000531556 MAP3K13O43283 966 aa13.71□□□□□ -0.21
AP004247.1-201ENST00000531556 SEC24BO95487 1268 aa13.71□□□□□ -0.21
AP004247.1-201ENST00000531556 IER5LQ5T953 404 aa13.66□□□□□ -0.22
AP004247.1-201ENST00000531556 MIER1Q8N108 512 aa13.66□□□□□ -0.22
AP004247.1-201ENST00000531556 TRPC6Q9Y210 931 aa13.66□□□□□ -0.22
AP004247.1-201ENST00000531556 SGIP1Q9BQI5 828 aa13.65□□□□□ -0.22
AP004247.1-201ENST00000531556 TTLL13PA6NNM8 815 aa13.64□□□□□ -0.23
AP004247.1-201ENST00000531556 RASEFQ8IZ41 740 aa13.62□□□□□ -0.23
AP004247.1-201ENST00000531556 COLQQ9Y215 455 aaPredicted RBP13.61□□□□□ -0.23
AP004247.1-201ENST00000531556 CDAN1Q8IWY9 1227 aa13.58□□□□□ -0.24
AP004247.1-201ENST00000531556 TRIM35Q9UPQ4 493 aa13.56□□□□□ -0.24
AP004247.1-201ENST00000531556 ZBTB47Q9UFB7 747 aaPredicted RBP13.55□□□□□ -0.24
AP004247.1-201ENST00000531556 PCDHB13Q9Y5F0 798 aa13.54□□□□□ -0.24
AP004247.1-201ENST00000531556 PLCD3Q8N3E9 789 aa13.5□□□□□ -0.25
AP004247.1-201ENST00000531556 SLAIN1Q8ND83 568 aa13.5□□□□□ -0.25
AP004247.1-201ENST00000531556 PLCG2P16885 1265 aa13.45□□□□□ -0.26
AP004247.1-201ENST00000531556 ST18O60284 1047 aa13.44□□□□□ -0.26
AP004247.1-201ENST00000531556 TMEM106CQ9BVX2 250 aa13.42□□□□□ -0.26
AP004247.1-201ENST00000531556 IFNL1Q8IU54 200 aa13.41□□□□□ -0.26
AP004247.1-201ENST00000531556 FAM212AQ96EL1 285 aa13.41□□□□□ -0.26
AP004247.1-201ENST00000531556 TMEM121BQ9BXQ6 578 aaPredicted RBP13.4□□□□□ -0.26
AP004247.1-201ENST00000531556 NUBP1P53384 320 aa13.39□□□□□ -0.27
AP004247.1-201ENST00000531556 SNPHO15079 494 aa13.37□□□□□ -0.27
AP004247.1-201ENST00000531556 IRX5P78411 483 aaPredicted RBP13.34□□□□□ -0.27
AP004247.1-201ENST00000531556 OCEL1Q9H607 264 aa13.32□□□□□ -0.28
AP004247.1-201ENST00000531556 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.28□□□□□ -0.28
AP004247.1-201ENST00000531556 MMRN1Q13201 1228 aa13.27□□□□□ -0.29
AP004247.1-201ENST00000531556 SPNS2Q8IVW8 549 aa13.25□□□□□ -0.29
AP004247.1-201ENST00000531556 DCAF8Q5TAQ9 597 aa13.17□□□□□ -0.3
AP004247.1-201ENST00000531556 MARVELD3Q96A59 401 aa13.14□□□□□ -0.31
AP004247.1-201ENST00000531556 PYGBP11216 843 aa13.12□□□□□ -0.31
AP004247.1-201ENST00000531556 C3orf67Q6ZVT6 689 aa13.12□□□□□ -0.31
AP004247.1-201ENST00000531556 L3MBTL3Q96JM7 780 aaPredicted RBP13.11□□□□□ -0.31
AP004247.1-201ENST00000531556 PCDHB8Q9UN66 801 aa13.09□□□□□ -0.31
AP004247.1-201ENST00000531556 EMP3P54852 163 aa13.08□□□□□ -0.32
AP004247.1-201ENST00000531556 GOLGA2Q08379 1002 aa13.08□□□□□ -0.32
AP004247.1-201ENST00000531556 MKRN3Q13064 507 aaKnown RBP13.05□□□□□ -0.32
AP004247.1-201ENST00000531556 ZNF467Q7Z7K2 595 aaPredicted RBP13.05□□□□□ -0.32
AP004247.1-201ENST00000531556 PDCD7Q8N8D1 485 aaKnown RBP13.05□□□□□ -0.32
AP004247.1-201ENST00000531556 GSE1Q14687 1217 aa13□□□□□ -0.33
AP004247.1-201ENST00000531556 FBXO3Q9UK99 471 aa13□□□□□ -0.33
AP004247.1-201ENST00000531556 HS3ST6Q96QI5 342 aa12.97□□□□□ -0.33
AP004247.1-201ENST00000531556 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.96□□□□□ -0.33
AP004247.1-201ENST00000531556 FKBP8Q14318 412 aa12.95□□□□□ -0.34
AP004247.1-201ENST00000531556 FAM205CA6NFA0 338 aa12.93□□□□□ -0.34
AP004247.1-201ENST00000531556 CHRM1P11229 460 aaPredicted RBP12.93□□□□□ -0.34
AP004247.1-201ENST00000531556 KRTAP3-3Q9BYR6 98 aa12.93□□□□□ -0.34
AP004247.1-201ENST00000531556 KRTAP3-2Q9BYR7 98 aa12.93□□□□□ -0.34
AP004247.1-201ENST00000531556 PSEN1P49768 467 aa12.89□□□□□ -0.35
AP004247.1-201ENST00000531556 G3V3G9 751 aa12.87□□□□□ -0.35
AP004247.1-201ENST00000531556 KLHL34Q8N239 644 aa12.87□□□□□ -0.35
AP004247.1-201ENST00000531556 POTEB3A0JP26 581 aa12.86□□□□□ -0.35
AP004247.1-201ENST00000531556 POTEBQ6S5H4 581 aa12.86□□□□□ -0.35
AP004247.1-201ENST00000531556 ILDR1Q86SU0 546 aaPredicted RBP12.86□□□□□ -0.35
AP004247.1-201ENST00000531556 PDAP1Q13442 181 aaKnown RBP12.82□□□□□ -0.36
AP004247.1-201ENST00000531556 ZNF710Q8N1W2 664 aa12.79□□□□□ -0.36
AP004247.1-201ENST00000531556 BOLA1Q9Y3E2 137 aa12.79□□□□□ -0.36
AP004247.1-201ENST00000531556 HOXB1P14653 301 aaPredicted RBP12.78□□□□□ -0.36
AP004247.1-201ENST00000531556 DOK7Q18PE1 504 aa12.77□□□□□ -0.37
AP004247.1-201ENST00000531556 HOXB3P14651 431 aaPredicted RBP12.76□□□□□ -0.37
AP004247.1-201ENST00000531556 VASPP50552 380 aaPredicted RBP12.76□□□□□ -0.37
AP004247.1-201ENST00000531556 ERBB3P21860 1342 aa12.73□□□□□ -0.37
AP004247.1-201ENST00000531556 DPY19L2Q6NUT2 758 aa12.73□□□□□ -0.37
AP004247.1-201ENST00000531556 RIMBP2O15034 1052 aa12.72□□□□□ -0.37
AP004247.1-201ENST00000531556 CABP2Q9NPB3 220 aa12.71□□□□□ -0.37
AP004247.1-201ENST00000531556 RNF166Q96A37 237 aaPredicted RBP12.69□□□□□ -0.38
AP004247.1-201ENST00000531556 ZSWIM6Q9HCJ5 1215 aa12.63□□□□□ -0.39
AP004247.1-201ENST00000531556 MYT1LQ9UL68 1186 aa12.62□□□□□ -0.39
AP004247.1-201ENST00000531556 PTGER2P43116 358 aa12.6□□□□□ -0.39
AP004247.1-201ENST00000531556 VARS2Q5ST30 1063 aaKnown RBP12.6□□□□□ -0.39
AP004247.1-201ENST00000531556 SPOCK2Q92563 424 aa12.58□□□□□ -0.4
AP004247.1-201ENST00000531556 CIZ1Q9ULV3 898 aaPredicted RBP12.58□□□□□ -0.4
AP004247.1-201ENST00000531556 ZNF687Q8N1G0 1237 aa12.56□□□□□ -0.4
AP004247.1-201ENST00000531556 TRIM41Q8WV44 630 aa12.5□□□□□ -0.41
AP004247.1-201ENST00000531556 EFCAB3Q8N7B9 438 aa12.48□□□□□ -0.41
AP004247.1-201ENST00000531556 MICALL2Q8IY33 904 aa12.47□□□□□ -0.41
AP004247.1-201ENST00000531556 GPR153Q6NV75 609 aa12.46□□□□□ -0.41
AP004247.1-201ENST00000531556 IFNLR1Q8IU57 520 aaPredicted RBP12.43□□□□□ -0.42
AP004247.1-201ENST00000531556 SOX12O15370 315 aa12.42□□□□□ -0.42
AP004247.1-201ENST00000531556 TMEM92Q6UXU6 159 aa12.41□□□□□ -0.42
AP004247.1-201ENST00000531556 ANKRD13DQ6ZTN6 518 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms