RNA–Protein interactions for RNA: ENST00000530818.1

PTPN11-203, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 3

Gene PTPN11, Length 486 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-203ENST00000530818 GSE1Q14687 1217 aa7.39□□□□□ -1.23
PTPN11-203ENST00000530818 FAM212AQ96EL1 285 aa7.38□□□□□ -1.23
PTPN11-203ENST00000530818 RGL2O15211 777 aa7.37□□□□□ -1.23
PTPN11-203ENST00000530818 PYGBP11216 843 aa7.37□□□□□ -1.23
PTPN11-203ENST00000530818 RNF25Q96BH1 459 aaPredicted RBP7.37□□□□□ -1.23
PTPN11-203ENST00000530818 HAX1O00165 279 aa7.36□□□□□ -1.23
PTPN11-203ENST00000530818 ECM2O94769 699 aaPredicted RBP7.36□□□□□ -1.23
PTPN11-203ENST00000530818 CHRM1P11229 460 aaPredicted RBP7.36□□□□□ -1.23
PTPN11-203ENST00000530818 ZRANB1Q9UGI0 708 aa7.36□□□□□ -1.23
PTPN11-203ENST00000530818 PHF12Q96QT6 1004 aa7.34□□□□□ -1.23
PTPN11-203ENST00000530818 KIF12Q96FN5 646 aa7.33□□□□□ -1.24
PTPN11-203ENST00000530818 MAP3K13O43283 966 aa7.32□□□□□ -1.24
PTPN11-203ENST00000530818 ZNF579Q8NAF0 562 aaKnown RBP7.31□□□□□ -1.24
PTPN11-203ENST00000530818 TRIM41Q8WV44 630 aa7.29□□□□□ -1.24
PTPN11-203ENST00000530818 PCDHB8Q9UN66 801 aa7.29□□□□□ -1.24
PTPN11-203ENST00000530818 PCDHB13Q9Y5F0 798 aa7.29□□□□□ -1.24
PTPN11-203ENST00000530818 PAK3O75914 559 aaPredicted RBP7.28□□□□□ -1.24
PTPN11-203ENST00000530818 IFNL1Q8IU54 200 aa7.28□□□□□ -1.24
PTPN11-203ENST00000530818 TRPC6Q9Y210 931 aa7.27□□□□□ -1.25
PTPN11-203ENST00000530818 RIOK3O14730 519 aaKnown RBP7.24□□□□□ -1.25
PTPN11-203ENST00000530818 GALR2O43603 387 aaPredicted RBP7.24□□□□□ -1.25
PTPN11-203ENST00000530818 SP7Q8TDD2 431 aaPredicted RBP7.24□□□□□ -1.25
PTPN11-203ENST00000530818 MS4A3Q96HJ5 214 aa7.24□□□□□ -1.25
PTPN11-203ENST00000530818 SGIP1Q9BQI5 828 aa7.24□□□□□ -1.25
PTPN11-203ENST00000530818 GABBR2O75899 941 aa7.22□□□□□ -1.25
PTPN11-203ENST00000530818 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.2□□□□□ -1.26
PTPN11-203ENST00000530818 ZFP91Q96JP5 570 aaPredicted RBP7.2□□□□□ -1.26
PTPN11-203ENST00000530818 VGFO15240 615 aaPredicted RBP7.19□□□□□ -1.26
PTPN11-203ENST00000530818 ZNF467Q7Z7K2 595 aaPredicted RBP7.19□□□□□ -1.26
PTPN11-203ENST00000530818 DCAF8L2P0C7V8 631 aa7.18□□□□□ -1.26
PTPN11-203ENST00000530818 CHGAP10645 457 aaKnown RBP7.17□□□□□ -1.26
PTPN11-203ENST00000530818 PSEN1P49768 467 aa7.17□□□□□ -1.26
PTPN11-203ENST00000530818 POTEIP0CG38 1075 aa7.15□□□□□ -1.26
PTPN11-203ENST00000530818 PDAP1Q13442 181 aaKnown RBP7.15□□□□□ -1.26
PTPN11-203ENST00000530818 NKX1-1Q15270 411 aaPredicted RBP7.15□□□□□ -1.26
PTPN11-203ENST00000530818 HS6ST3Q8IZP7 471 aa7.15□□□□□ -1.26
PTPN11-203ENST00000530818 BCL11BQ9C0K0 894 aaPredicted RBP7.14□□□□□ -1.27
PTPN11-203ENST00000530818 BMP2KQ9NSY1 1161 aaPredicted RBP7.14□□□□□ -1.27
PTPN11-203ENST00000530818 CLCN6P51797 869 aa7.13□□□□□ -1.27
PTPN11-203ENST00000530818 DNAJC5Q9H3Z4 198 aa7.13□□□□□ -1.27
PTPN11-203ENST00000530818 TTLL13PA6NNM8 815 aa7.12□□□□□ -1.27
PTPN11-203ENST00000530818 STK25O00506 426 aa7.12□□□□□ -1.27
PTPN11-203ENST00000530818 PELP1Q8IZL8 1130 aaKnown RBP7.12□□□□□ -1.27
PTPN11-203ENST00000530818 ATMINO43313 823 aaPredicted RBP7.11□□□□□ -1.27
PTPN11-203ENST00000530818 TIE1P35590 1138 aa7.11□□□□□ -1.27
PTPN11-203ENST00000530818 ATN1P54259 1190 aaPredicted RBP7.11□□□□□ -1.27
PTPN11-203ENST00000530818 TMEM106CQ9BVX2 250 aa7.11□□□□□ -1.27
PTPN11-203ENST00000530818 STK24Q9Y6E0 443 aa7.11□□□□□ -1.27
PTPN11-203ENST00000530818 ASTLQ6HA08 431 aaPredicted RBP7.1□□□□□ -1.27
PTPN11-203ENST00000530818 BBXQ8WY36 941 aaPredicted RBP7.1□□□□□ -1.27
PTPN11-203ENST00000530818 EFCAB3Q8N7B9 438 aa7.08□□□□□ -1.28
PTPN11-203ENST00000530818 CABP2Q9NPB3 220 aa7.08□□□□□ -1.28
PTPN11-203ENST00000530818 TAOK2Q9UL54 1235 aa7.08□□□□□ -1.28
PTPN11-203ENST00000530818 GTPBP6O43824 516 aaPredicted RBP7.06□□□□□ -1.28
PTPN11-203ENST00000530818 TRIM35Q9UPQ4 493 aa7.06□□□□□ -1.28
PTPN11-203ENST00000530818 MFRPQ9BY79 579 aa7.05□□□□□ -1.28
PTPN11-203ENST00000530818 ILDR1Q86SU0 546 aaPredicted RBP7.04□□□□□ -1.28
PTPN11-203ENST00000530818 POTEFA5A3E0 1075 aa7.03□□□□□ -1.28
PTPN11-203ENST00000530818 FBXO22Q8NEZ5 403 aa7.03□□□□□ -1.28
PTPN11-203ENST00000530818 MS4A4AQ96JQ5 239 aa7.03□□□□□ -1.28
PTPN11-203ENST00000530818 DCBLD2Q96PD2 775 aa7.03□□□□□ -1.28
PTPN11-203ENST00000530818 PHF8Q9UPP1 1060 aa7.03□□□□□ -1.28
PTPN11-203ENST00000530818 PLCB2Q00722 1185 aa7.01□□□□□ -1.29
PTPN11-203ENST00000530818 PAXIP1Q6ZW49 1069 aaPredicted RBP7.01□□□□□ -1.29
PTPN11-203ENST00000530818 SOX12O15370 315 aa7□□□□□ -1.29
PTPN11-203ENST00000530818 PPP1R37O75864 691 aa7□□□□□ -1.29
PTPN11-203ENST00000530818 IRX5P78411 483 aaPredicted RBP7□□□□□ -1.29
PTPN11-203ENST00000530818 DPY19L2Q6NUT2 758 aa7□□□□□ -1.29
PTPN11-203ENST00000530818 COLQQ9Y215 455 aaPredicted RBP7□□□□□ -1.29
PTPN11-203ENST00000530818 CFAP44Q96MT7 982 aa6.99□□□□□ -1.29
PTPN11-203ENST00000530818 PDCD7Q8N8D1 485 aaKnown RBP6.98□□□□□ -1.29
PTPN11-203ENST00000530818 SPRYD3Q8NCJ5 442 aa6.98□□□□□ -1.29
PTPN11-203ENST00000530818 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.97□□□□□ -1.29
PTPN11-203ENST00000530818 MKRN3Q13064 507 aaKnown RBP6.96□□□□□ -1.3
PTPN11-203ENST00000530818 NLRP6P59044 892 aa6.95□□□□□ -1.3
PTPN11-203ENST00000530818 IER5LQ5T953 404 aa6.95□□□□□ -1.3
PTPN11-203ENST00000530818 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.95□□□□□ -1.3
PTPN11-203ENST00000530818 POTEB2H3BUK9 544 aa6.94□□□□□ -1.3
PTPN11-203ENST00000530818 GOLGA2Q08379 1002 aa6.94□□□□□ -1.3
PTPN11-203ENST00000530818 TSHZ2Q9NRE2 1034 aa6.94□□□□□ -1.3
PTPN11-203ENST00000530818 POTEJP0CG39 1038 aa6.93□□□□□ -1.3
PTPN11-203ENST00000530818 C7P10643 843 aa6.93□□□□□ -1.3
PTPN11-203ENST00000530818 SLC39A7Q92504 469 aa6.93□□□□□ -1.3
PTPN11-203ENST00000530818 OCEL1Q9H607 264 aa6.93□□□□□ -1.3
PTPN11-203ENST00000530818 METRNQ9UJH8 293 aa6.93□□□□□ -1.3
PTPN11-203ENST00000530818 CADPS2Q86UW7 1296 aa6.91□□□□□ -1.3
PTPN11-203ENST00000530818 TMEM121BQ9BXQ6 578 aaPredicted RBP6.88□□□□□ -1.31
PTPN11-203ENST00000530818 KDM2AQ9Y2K7 1162 aa6.88□□□□□ -1.31
PTPN11-203ENST00000530818 SEC24BO95487 1268 aa6.87□□□□□ -1.31
PTPN11-203ENST00000530818 PLCG2P16885 1265 aa6.86□□□□□ -1.31
PTPN11-203ENST00000530818 HAP1P54257 671 aaPredicted RBP6.86□□□□□ -1.31
PTPN11-203ENST00000530818 RYDENQ9NUL5 291 aaKnown RBP6.86□□□□□ -1.31
PTPN11-203ENST00000530818 SLC24A1O60721 1099 aa6.84□□□□□ -1.31
PTPN11-203ENST00000530818 TMEM92Q6UXU6 159 aa6.84□□□□□ -1.31
PTPN11-203ENST00000530818 MICALL2Q8IY33 904 aa6.84□□□□□ -1.31
PTPN11-203ENST00000530818 BOLA1Q9Y3E2 137 aa6.83□□□□□ -1.32
PTPN11-203ENST00000530818 NCKAP5LQ9HCH0 1330 aa6.82□□□□□ -1.32
PTPN11-203ENST00000530818 LHX8Q68G74 356 aa6.8□□□□□ -1.32
PTPN11-203ENST00000530818 L3MBTL3Q96JM7 780 aaPredicted RBP6.8□□□□□ -1.32
PTPN11-203ENST00000530818 KIF3CO14782 793 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms