RNA–Protein interactions for RNA: ENST00000530422.1

SCARNA9-201, small Cajal body-specific RNA 9, humanhuman

BASIC

Gene SCARNA9, Length 353 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA9-201ENST00000530422 CD44P16070 742 aaKnown RBP14.08□□□□□ -0.16
SCARNA9-201ENST00000530422 GABBR2O75899 941 aa14.06□□□□□ -0.16
SCARNA9-201ENST00000530422 PROM2Q8N271 834 aa14.06□□□□□ -0.16
SCARNA9-201ENST00000530422 KDM2AQ9Y2K7 1162 aa14.03□□□□□ -0.16
SCARNA9-201ENST00000530422 DCAF8L2P0C7V8 631 aa13.96□□□□□ -0.17
SCARNA9-201ENST00000530422 RANGAP1P46060 587 aaPredicted RBP13.94□□□□□ -0.18
SCARNA9-201ENST00000530422 MNX1P50219 401 aaPredicted RBP13.94□□□□□ -0.18
SCARNA9-201ENST00000530422 ZRANB1Q9UGI0 708 aa13.9□□□□□ -0.18
SCARNA9-201ENST00000530422 TMEM132AQ24JP5 1023 aa13.88□□□□□ -0.19
SCARNA9-201ENST00000530422 ZNF579Q8NAF0 562 aaKnown RBP13.85□□□□□ -0.19
SCARNA9-201ENST00000530422 POTEIP0CG38 1075 aa13.82□□□□□ -0.2
SCARNA9-201ENST00000530422 NPM1P06748 294 aaKnown RBP eCLIP13.8□□□□□ -0.2
SCARNA9-201ENST00000530422 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.78□□□□□ -0.2
SCARNA9-201ENST00000530422 PHF12Q96QT6 1004 aa13.77□□□□□ -0.21
SCARNA9-201ENST00000530422 C14orf37Q86TY3 774 aa13.76□□□□□ -0.21
SCARNA9-201ENST00000530422 FBXO3Q9UK99 471 aa13.76□□□□□ -0.21
SCARNA9-201ENST00000530422 GALR2O43603 387 aaPredicted RBP13.74□□□□□ -0.21
SCARNA9-201ENST00000530422 PAK3O75914 559 aaPredicted RBP13.73□□□□□ -0.21
SCARNA9-201ENST00000530422 CLCN6P51797 869 aa13.73□□□□□ -0.21
SCARNA9-201ENST00000530422 BBXQ8WY36 941 aaPredicted RBP13.73□□□□□ -0.21
SCARNA9-201ENST00000530422 MIER1Q8N108 512 aa13.71□□□□□ -0.21
SCARNA9-201ENST00000530422 PODXL2Q9NZ53 605 aa13.68□□□□□ -0.22
SCARNA9-201ENST00000530422 PAXIP1Q6ZW49 1069 aaPredicted RBP13.67□□□□□ -0.22
SCARNA9-201ENST00000530422 DCBLD2Q96PD2 775 aa13.67□□□□□ -0.22
SCARNA9-201ENST00000530422 TSPYL2Q9H2G4 693 aaPredicted RBP13.66□□□□□ -0.22
SCARNA9-201ENST00000530422 NBR1Q14596 966 aa13.64□□□□□ -0.23
SCARNA9-201ENST00000530422 PKD2Q13563 968 aa13.63□□□□□ -0.23
SCARNA9-201ENST00000530422 LHX8Q68G74 356 aa13.62□□□□□ -0.23
SCARNA9-201ENST00000530422 PLCD3Q8N3E9 789 aa13.61□□□□□ -0.23
SCARNA9-201ENST00000530422 CFAP44Q96MT7 982 aa13.61□□□□□ -0.23
SCARNA9-201ENST00000530422 PLEKHG5O94827 1062 aa13.59□□□□□ -0.23
SCARNA9-201ENST00000530422 RASEFQ8IZ41 740 aa13.58□□□□□ -0.24
SCARNA9-201ENST00000530422 MS4A3Q96HJ5 214 aa13.57□□□□□ -0.24
SCARNA9-201ENST00000530422 CCDC61Q9Y6R9 512 aa13.57□□□□□ -0.24
SCARNA9-201ENST00000530422 VASPP50552 380 aaPredicted RBP13.53□□□□□ -0.24
SCARNA9-201ENST00000530422 TSHZ2Q9NRE2 1034 aa13.51□□□□□ -0.25
SCARNA9-201ENST00000530422 IFNLR1Q8IU57 520 aaPredicted RBP13.47□□□□□ -0.25
SCARNA9-201ENST00000530422 KIF12Q96FN5 646 aa13.47□□□□□ -0.25
SCARNA9-201ENST00000530422 NUBP1P53384 320 aa13.46□□□□□ -0.25
SCARNA9-201ENST00000530422 SPRYD3Q8NCJ5 442 aa13.44□□□□□ -0.26
SCARNA9-201ENST00000530422 DNAJC5Q9H3Z4 198 aa13.44□□□□□ -0.26
SCARNA9-201ENST00000530422 MAP3K13O43283 966 aa13.43□□□□□ -0.26
SCARNA9-201ENST00000530422 ZBTB47Q9UFB7 747 aaPredicted RBP13.42□□□□□ -0.26
SCARNA9-201ENST00000530422 TRPC6Q9Y210 931 aa13.42□□□□□ -0.26
SCARNA9-201ENST00000530422 ATMINO43313 823 aaPredicted RBP13.4□□□□□ -0.26
SCARNA9-201ENST00000530422 ASTLQ6HA08 431 aaPredicted RBP13.4□□□□□ -0.26
SCARNA9-201ENST00000530422 POTEB2H3BUK9 544 aa13.39□□□□□ -0.27
SCARNA9-201ENST00000530422 NPM2Q86SE8 214 aaKnown RBP13.36□□□□□ -0.27
SCARNA9-201ENST00000530422 ATN1P54259 1190 aaPredicted RBP13.34□□□□□ -0.27
SCARNA9-201ENST00000530422 KLHL34Q8N239 644 aa13.34□□□□□ -0.27
SCARNA9-201ENST00000530422 SUPT5HO00267 1087 aaKnown RBP13.32□□□□□ -0.28
SCARNA9-201ENST00000530422 BMP2KQ9NSY1 1161 aaPredicted RBP13.32□□□□□ -0.28
SCARNA9-201ENST00000530422 METRNQ9UJH8 293 aa13.31□□□□□ -0.28
SCARNA9-201ENST00000530422 FAM212AQ96EL1 285 aa13.3□□□□□ -0.28
SCARNA9-201ENST00000530422 PCDHB13Q9Y5F0 798 aa13.28□□□□□ -0.28
SCARNA9-201ENST00000530422 SLC39A7Q92504 469 aa13.26□□□□□ -0.29
SCARNA9-201ENST00000530422 OTUD5Q96G74 571 aa13.26□□□□□ -0.29
SCARNA9-201ENST00000530422 EIF5BO60841 1220 aaKnown RBP13.25□□□□□ -0.29
SCARNA9-201ENST00000530422 ECM2O94769 699 aaPredicted RBP13.24□□□□□ -0.29
SCARNA9-201ENST00000530422 C7P10643 843 aa13.24□□□□□ -0.29
SCARNA9-201ENST00000530422 TIE1P35590 1138 aa13.24□□□□□ -0.29
SCARNA9-201ENST00000530422 IFNL1Q8IU54 200 aa13.24□□□□□ -0.29
SCARNA9-201ENST00000530422 TTLL13PA6NNM8 815 aa13.23□□□□□ -0.29
SCARNA9-201ENST00000530422 DCAF8Q5TAQ9 597 aa13.23□□□□□ -0.29
SCARNA9-201ENST00000530422 POTEJP0CG39 1038 aa13.22□□□□□ -0.29
SCARNA9-201ENST00000530422 TRIM26Q12899 539 aaPredicted RBP13.21□□□□□ -0.29
SCARNA9-201ENST00000530422 SGIP1Q9BQI5 828 aa13.21□□□□□ -0.29
SCARNA9-201ENST00000530422 POTEFA5A3E0 1075 aa13.2□□□□□ -0.3
SCARNA9-201ENST00000530422 PYGBP11216 843 aa13.2□□□□□ -0.3
SCARNA9-201ENST00000530422 UBTFP17480 764 aaKnown RBP13.15□□□□□ -0.3
SCARNA9-201ENST00000530422 TRIM35Q9UPQ4 493 aa13.14□□□□□ -0.31
SCARNA9-201ENST00000530422 COLQQ9Y215 455 aaPredicted RBP13.12□□□□□ -0.31
SCARNA9-201ENST00000530422 TMEM106CQ9BVX2 250 aa13.1□□□□□ -0.31
SCARNA9-201ENST00000530422 PCDHB8Q9UN66 801 aa13.1□□□□□ -0.31
SCARNA9-201ENST00000530422 RGL2O15211 777 aa13.07□□□□□ -0.32
SCARNA9-201ENST00000530422 HRCP23327 699 aa13.05□□□□□ -0.32
SCARNA9-201ENST00000530422 GSE1Q14687 1217 aa13.05□□□□□ -0.32
SCARNA9-201ENST00000530422 SPOCK2Q92563 424 aa13.04□□□□□ -0.32
SCARNA9-201ENST00000530422 SEC24BO95487 1268 aa13.03□□□□□ -0.32
SCARNA9-201ENST00000530422 IER5LQ5T953 404 aa13.01□□□□□ -0.33
SCARNA9-201ENST00000530422 MAMSTRQ6ZN01 415 aa12.98□□□□□ -0.33
SCARNA9-201ENST00000530422 CHGAP10645 457 aaKnown RBP12.97□□□□□ -0.33
SCARNA9-201ENST00000530422 BRPF1P55201 1214 aaPredicted RBP12.96□□□□□ -0.33
SCARNA9-201ENST00000530422 SCUBE2Q9NQ36 999 aa12.96□□□□□ -0.33
SCARNA9-201ENST00000530422 CHRM1P11229 460 aaPredicted RBP12.95□□□□□ -0.34
SCARNA9-201ENST00000530422 CIZ1Q9ULV3 898 aaPredicted RBP12.95□□□□□ -0.34
SCARNA9-201ENST00000530422 IRX5P78411 483 aaPredicted RBP12.93□□□□□ -0.34
SCARNA9-201ENST00000530422 ZNF467Q7Z7K2 595 aaPredicted RBP12.92□□□□□ -0.34
SCARNA9-201ENST00000530422 PLCG2P16885 1265 aa12.9□□□□□ -0.34
SCARNA9-201ENST00000530422 PSEN1P49768 467 aa12.86□□□□□ -0.35
SCARNA9-201ENST00000530422 LCE2DQ5TA82 110 aaPredicted RBP12.85□□□□□ -0.35
SCARNA9-201ENST00000530422 OCEL1Q9H607 264 aa12.84□□□□□ -0.35
SCARNA9-201ENST00000530422 POTEMA6NI47 508 aa12.82□□□□□ -0.36
SCARNA9-201ENST00000530422 POTEGQ6S5H5 508 aa12.8□□□□□ -0.36
SCARNA9-201ENST00000530422 FAM163AQ96GL9 167 aaPredicted RBP12.8□□□□□ -0.36
SCARNA9-201ENST00000530422 PDAP1Q13442 181 aaKnown RBP12.79□□□□□ -0.36
SCARNA9-201ENST00000530422 HS6ST3Q8IZP7 471 aa12.79□□□□□ -0.36
SCARNA9-201ENST00000530422 PDCD7Q8N8D1 485 aaKnown RBP12.78□□□□□ -0.36
SCARNA9-201ENST00000530422 CCDC9Q9Y3X0 531 aaKnown RBP12.78□□□□□ -0.36
SCARNA9-201ENST00000530422 GOLGA2Q08379 1002 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms