RNA–Protein interactions for RNA: ENST00000530369.1

USP47-210, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 4

Gene USP47, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-210ENST00000530369 CIZ1Q9ULV3 898 aaPredicted RBP9.55□□□□□ -0.88
USP47-210ENST00000530369 DCAF8Q5TAQ9 597 aa9.54□□□□□ -0.88
USP47-210ENST00000530369 TRIM41Q8WV44 630 aa9.54□□□□□ -0.88
USP47-210ENST00000530369 RASEFQ8IZ41 740 aa9.52□□□□□ -0.89
USP47-210ENST00000530369 TSPYL2Q9H2G4 693 aaPredicted RBP9.52□□□□□ -0.89
USP47-210ENST00000530369 POTEIP0CG38 1075 aa9.5□□□□□ -0.89
USP47-210ENST00000530369 ZRANB1Q9UGI0 708 aa9.49□□□□□ -0.89
USP47-210ENST00000530369 CLCN6P51797 869 aa9.44□□□□□ -0.9
USP47-210ENST00000530369 ECM2O94769 699 aaPredicted RBP9.42□□□□□ -0.9
USP47-210ENST00000530369 ZNF579Q8NAF0 562 aaKnown RBP9.42□□□□□ -0.9
USP47-210ENST00000530369 CCDC61Q9Y6R9 512 aa9.42□□□□□ -0.9
USP47-210ENST00000530369 RTN4Q9NQC3 1192 aaKnown RBP9.4□□□□□ -0.9
USP47-210ENST00000530369 CHRM1P11229 460 aaPredicted RBP9.39□□□□□ -0.91
USP47-210ENST00000530369 TAOK2Q9UL54 1235 aa9.39□□□□□ -0.91
USP47-210ENST00000530369 PYGBP11216 843 aa9.38□□□□□ -0.91
USP47-210ENST00000530369 PKD2Q13563 968 aa9.37□□□□□ -0.91
USP47-210ENST00000530369 SGIP1Q9BQI5 828 aa9.37□□□□□ -0.91
USP47-210ENST00000530369 ZNF467Q7Z7K2 595 aaPredicted RBP9.36□□□□□ -0.91
USP47-210ENST00000530369 PHF12Q96QT6 1004 aa9.34□□□□□ -0.91
USP47-210ENST00000530369 KIF12Q96FN5 646 aa9.33□□□□□ -0.92
USP47-210ENST00000530369 PCDHB13Q9Y5F0 798 aa9.33□□□□□ -0.92
USP47-210ENST00000530369 RIOK3O14730 519 aaKnown RBP9.3□□□□□ -0.92
USP47-210ENST00000530369 MAP3K13O43283 966 aa9.29□□□□□ -0.92
USP47-210ENST00000530369 DCAF8L2P0C7V8 631 aa9.29□□□□□ -0.92
USP47-210ENST00000530369 VGFO15240 615 aaPredicted RBP9.26□□□□□ -0.93
USP47-210ENST00000530369 DCBLD2Q96PD2 775 aa9.26□□□□□ -0.93
USP47-210ENST00000530369 MS4A3Q96HJ5 214 aa9.25□□□□□ -0.93
USP47-210ENST00000530369 RGL2O15211 777 aa9.24□□□□□ -0.93
USP47-210ENST00000530369 PDAP1Q13442 181 aaKnown RBP9.24□□□□□ -0.93
USP47-210ENST00000530369 IFNL1Q8IU54 200 aa9.23□□□□□ -0.93
USP47-210ENST00000530369 PCDHB8Q9UN66 801 aa9.22□□□□□ -0.93
USP47-210ENST00000530369 GALR2O43603 387 aaPredicted RBP9.2□□□□□ -0.94
USP47-210ENST00000530369 RNF25Q96BH1 459 aaPredicted RBP9.2□□□□□ -0.94
USP47-210ENST00000530369 TIE1P35590 1138 aa9.19□□□□□ -0.94
USP47-210ENST00000530369 PSEN1P49768 467 aa9.19□□□□□ -0.94
USP47-210ENST00000530369 OTUD5Q96G74 571 aa9.19□□□□□ -0.94
USP47-210ENST00000530369 POTEB2H3BUK9 544 aa9.17□□□□□ -0.94
USP47-210ENST00000530369 GOLGA2Q08379 1002 aa9.17□□□□□ -0.94
USP47-210ENST00000530369 PLSCR2Q9NRY7 297 aa9.17□□□□□ -0.94
USP47-210ENST00000530369 STK25O00506 426 aa9.16□□□□□ -0.94
USP47-210ENST00000530369 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.15□□□□□ -0.94
USP47-210ENST00000530369 ZFP91Q96JP5 570 aaPredicted RBP9.15□□□□□ -0.94
USP47-210ENST00000530369 TMEM106CQ9BVX2 250 aa9.15□□□□□ -0.94
USP47-210ENST00000530369 CHGAP10645 457 aaKnown RBP9.14□□□□□ -0.95
USP47-210ENST00000530369 HS6ST3Q8IZP7 471 aa9.12□□□□□ -0.95
USP47-210ENST00000530369 BCL11BQ9C0K0 894 aaPredicted RBP9.12□□□□□ -0.95
USP47-210ENST00000530369 STK24Q9Y6E0 443 aa9.12□□□□□ -0.95
USP47-210ENST00000530369 TTLL13PA6NNM8 815 aa9.1□□□□□ -0.95
USP47-210ENST00000530369 BMP2KQ9NSY1 1161 aaPredicted RBP9.1□□□□□ -0.95
USP47-210ENST00000530369 MKRN3Q13064 507 aaKnown RBP9.08□□□□□ -0.96
USP47-210ENST00000530369 ASTLQ6HA08 431 aaPredicted RBP9.08□□□□□ -0.96
USP47-210ENST00000530369 ATMINO43313 823 aaPredicted RBP9.07□□□□□ -0.96
USP47-210ENST00000530369 PELP1Q8IZL8 1130 aaKnown RBP9.07□□□□□ -0.96
USP47-210ENST00000530369 CABP2Q9NPB3 220 aa9.07□□□□□ -0.96
USP47-210ENST00000530369 RYDENQ9NUL5 291 aaKnown RBP9.07□□□□□ -0.96
USP47-210ENST00000530369 TRIM35Q9UPQ4 493 aa9.07□□□□□ -0.96
USP47-210ENST00000530369 TRPC6Q9Y210 931 aa9.07□□□□□ -0.96
USP47-210ENST00000530369 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.06□□□□□ -0.96
USP47-210ENST00000530369 POTEMA6NI47 508 aa9.04□□□□□ -0.96
USP47-210ENST00000530369 IER5LQ5T953 404 aa9.04□□□□□ -0.96
USP47-210ENST00000530369 SLC39A7Q92504 469 aa9.04□□□□□ -0.96
USP47-210ENST00000530369 ATN1P54259 1190 aaPredicted RBP9.03□□□□□ -0.96
USP47-210ENST00000530369 BBXQ8WY36 941 aaPredicted RBP9.03□□□□□ -0.96
USP47-210ENST00000530369 DNAJC5Q9H3Z4 198 aa9.03□□□□□ -0.96
USP47-210ENST00000530369 SOX12O15370 315 aa9.01□□□□□ -0.97
USP47-210ENST00000530369 POTEGQ6S5H5 508 aa9.01□□□□□ -0.97
USP47-210ENST00000530369 POTEJP0CG39 1038 aa9□□□□□ -0.97
USP47-210ENST00000530369 C7P10643 843 aa9□□□□□ -0.97
USP47-210ENST00000530369 SEC24BO95487 1268 aa8.99□□□□□ -0.97
USP47-210ENST00000530369 EFCAB3Q8N7B9 438 aa8.99□□□□□ -0.97
USP47-210ENST00000530369 NLRP6P59044 892 aa8.98□□□□□ -0.97
USP47-210ENST00000530369 PLCG2P16885 1265 aa8.97□□□□□ -0.97
USP47-210ENST00000530369 PCDH10Q9P2E7 1040 aa8.97□□□□□ -0.97
USP47-210ENST00000530369 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.96□□□□□ -0.985e-7■■□□□ 14.3
USP47-210ENST00000530369 METRNQ9UJH8 293 aa8.96□□□□□ -0.98
USP47-210ENST00000530369 OCEL1Q9H607 264 aa8.94□□□□□ -0.98
USP47-210ENST00000530369 G3V3G9 751 aa8.93□□□□□ -0.98
USP47-210ENST00000530369 LCE2DQ5TA82 110 aaPredicted RBP8.92□□□□□ -0.98
USP47-210ENST00000530369 SPRYD3Q8NCJ5 442 aa8.92□□□□□ -0.98
USP47-210ENST00000530369 IRX5P78411 483 aaPredicted RBP8.9□□□□□ -0.98
USP47-210ENST00000530369 MFRPQ9BY79 579 aa8.9□□□□□ -0.98
USP47-210ENST00000530369 PHF8Q9UPP1 1060 aa8.9□□□□□ -0.98
USP47-210ENST00000530369 MAMSTRQ6ZN01 415 aa8.89□□□□□ -0.99
USP47-210ENST00000530369 NKX1-1Q15270 411 aaPredicted RBP8.88□□□□□ -0.99
USP47-210ENST00000530369 PAXIP1Q6ZW49 1069 aaPredicted RBP8.88□□□□□ -0.99
USP47-210ENST00000530369 L3MBTL3Q96JM7 780 aaPredicted RBP8.88□□□□□ -0.99
USP47-210ENST00000530369 CFAP44Q96MT7 982 aa8.88□□□□□ -0.99
USP47-210ENST00000530369 ILDR1Q86SU0 546 aaPredicted RBP8.86□□□□□ -0.99
USP47-210ENST00000530369 FBXO22Q8NEZ5 403 aa8.86□□□□□ -0.99
USP47-210ENST00000530369 POTEFA5A3E0 1075 aa8.85□□□□□ -0.99
USP47-210ENST00000530369 GTPBP6O43824 516 aaPredicted RBP8.84□□□□□ -0.99
USP47-210ENST00000530369 PDCD7Q8N8D1 485 aaKnown RBP8.84□□□□□ -0.99
USP47-210ENST00000530369 PLCB2Q00722 1185 aa8.83□□□□□ -1
USP47-210ENST00000530369 COLQQ9Y215 455 aaPredicted RBP8.82□□□□□ -1
USP47-210ENST00000530369 C3orf67Q6ZVT6 689 aa8.81□□□□□ -1
USP47-210ENST00000530369 MS4A4AQ96JQ5 239 aa8.81□□□□□ -1
USP47-210ENST00000530369 BOLA1Q9Y3E2 137 aa8.81□□□□□ -1
USP47-210ENST00000530369 SCUBE2Q9NQ36 999 aa8.79□□□□□ -1
USP47-210ENST00000530369 FAM163AQ96GL9 167 aaPredicted RBP8.78□□□□□ -1
USP47-210ENST00000530369 DPY19L2Q6NUT2 758 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms