RNA–Protein interactions for RNA: ENST00000530309.1

CASP4-208, Transcript of caspase 4, humanhuman

TSL 2

Gene CASP4, Length 481 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-208ENST00000530309 PLCB2Q00722 1185 aa14.94□□□□□ -0.02
CASP4-208ENST00000530309 CHRM1P11229 460 aaPredicted RBP14.89□□□□□ -0.03
CASP4-208ENST00000530309 BBXQ8WY36 941 aaPredicted RBP14.89□□□□□ -0.03
CASP4-208ENST00000530309 PIP4P2Q8N4L2 257 aa14.88□□□□□ -0.03
CASP4-208ENST00000530309 RNF25Q96BH1 459 aaPredicted RBP14.88□□□□□ -0.03
CASP4-208ENST00000530309 CHGAP10645 457 aaKnown RBP14.85□□□□□ -0.03
CASP4-208ENST00000530309 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.85□□□□□ -0.03
CASP4-208ENST00000530309 RIOK3O14730 519 aaKnown RBP14.84□□□□□ -0.03
CASP4-208ENST00000530309 TSPYL2Q9H2G4 693 aaPredicted RBP14.82□□□□□ -0.04
CASP4-208ENST00000530309 PYGBP11216 843 aa14.81□□□□□ -0.04
CASP4-208ENST00000530309 TAOK2Q9UL54 1235 aa14.81□□□□□ -0.04
CASP4-208ENST00000530309 POTEHQ6S545 545 aa14.77□□□□□ -0.05
CASP4-208ENST00000530309 HS6ST3Q8IZP7 471 aa14.77□□□□□ -0.05
CASP4-208ENST00000530309 VGFO15240 615 aaPredicted RBP14.73□□□□□ -0.05
CASP4-208ENST00000530309 PAXIP1Q6ZW49 1069 aaPredicted RBP14.72□□□□□ -0.05
CASP4-208ENST00000530309 HAP1P54257 671 aaPredicted RBP14.71□□□□□ -0.05
CASP4-208ENST00000530309 PAK3O75914 559 aaPredicted RBP14.69□□□□□ -0.06
CASP4-208ENST00000530309 CCDC61Q9Y6R9 512 aa14.69□□□□□ -0.06
CASP4-208ENST00000530309 CFAP44Q96MT7 982 aa14.68□□□□□ -0.06
CASP4-208ENST00000530309 SGIP1Q9BQI5 828 aa14.68□□□□□ -0.06
CASP4-208ENST00000530309 SPRYD3Q8NCJ5 442 aa14.67□□□□□ -0.06
CASP4-208ENST00000530309 DNAJC5Q9H3Z4 198 aa14.67□□□□□ -0.06
CASP4-208ENST00000530309 STK25O00506 426 aa14.65□□□□□ -0.06
CASP4-208ENST00000530309 ZNF467Q7Z7K2 595 aaPredicted RBP14.63□□□□□ -0.07
CASP4-208ENST00000530309 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.62□□□□□ -0.07
CASP4-208ENST00000530309 ZFP91Q96JP5 570 aaPredicted RBP14.62□□□□□ -0.07
CASP4-208ENST00000530309 BCL11BQ9C0K0 894 aaPredicted RBP14.58□□□□□ -0.08
CASP4-208ENST00000530309 STK24Q9Y6E0 443 aa14.57□□□□□ -0.08
CASP4-208ENST00000530309 CD44P16070 742 aaKnown RBP14.56□□□□□ -0.08
CASP4-208ENST00000530309 ZNF579Q8NAF0 562 aaKnown RBP14.56□□□□□ -0.08
CASP4-208ENST00000530309 NKX1-1Q15270 411 aaPredicted RBP14.55□□□□□ -0.08
CASP4-208ENST00000530309 PCDHB8Q9UN66 801 aa14.55□□□□□ -0.08
CASP4-208ENST00000530309 PCDHB13Q9Y5F0 798 aa14.55□□□□□ -0.08
CASP4-208ENST00000530309 ZRANB1Q9UGI0 708 aa14.54□□□□□ -0.08
CASP4-208ENST00000530309 PDAP1Q13442 181 aaKnown RBP14.53□□□□□ -0.08
CASP4-208ENST00000530309 KIF12Q96FN5 646 aa14.53□□□□□ -0.08
CASP4-208ENST00000530309 VSIG10Q8N0Z9 540 aa14.52□□□□□ -0.09
CASP4-208ENST00000530309 MAP3K13O43283 966 aa14.5□□□□□ -0.09
CASP4-208ENST00000530309 IFNL1Q8IU54 200 aa14.48□□□□□ -0.09
CASP4-208ENST00000530309 PSEN1P49768 467 aa14.47□□□□□ -0.09
CASP4-208ENST00000530309 C19orf67A6NJJ6 358 aa14.46□□□□□ -0.09
CASP4-208ENST00000530309 GTPBP6O43824 516 aaPredicted RBP14.45□□□□□ -0.1
CASP4-208ENST00000530309 TSHZ2Q9NRE2 1034 aa14.45□□□□□ -0.1
CASP4-208ENST00000530309 PHF12Q96QT6 1004 aa14.43□□□□□ -0.1
CASP4-208ENST00000530309 RYDENQ9NUL5 291 aaKnown RBP14.41□□□□□ -0.1
CASP4-208ENST00000530309 KDM2AQ9Y2K7 1162 aa14.39□□□□□ -0.11
CASP4-208ENST00000530309 HAX1O00165 279 aa14.28□□□□□ -0.12
CASP4-208ENST00000530309 MS4A3Q96HJ5 214 aa14.27□□□□□ -0.13
CASP4-208ENST00000530309 CABP2Q9NPB3 220 aa14.27□□□□□ -0.13
CASP4-208ENST00000530309 EFCAB3Q8N7B9 438 aa14.25□□□□□ -0.13
CASP4-208ENST00000530309 MFRPQ9BY79 579 aa14.25□□□□□ -0.13
CASP4-208ENST00000530309 SOX12O15370 315 aa14.22□□□□□ -0.13
CASP4-208ENST00000530309 TMEM106CQ9BVX2 250 aa14.22□□□□□ -0.13
CASP4-208ENST00000530309 TRPC6Q9Y210 931 aa14.21□□□□□ -0.13
CASP4-208ENST00000530309 NLRP6P59044 892 aa14.18□□□□□ -0.14
CASP4-208ENST00000530309 EVX2Q03828 476 aa14.18□□□□□ -0.14
CASP4-208ENST00000530309 CLCN6P51797 869 aa14.16□□□□□ -0.14
CASP4-208ENST00000530309 FBXO22Q8NEZ5 403 aa14.16□□□□□ -0.14
CASP4-208ENST00000530309 BCANQ96GW7 911 aa14.16□□□□□ -0.14
CASP4-208ENST00000530309 PHF8Q9UPP1 1060 aa14.16□□□□□ -0.14
CASP4-208ENST00000530309 TIE1P35590 1138 aa14.15□□□□□ -0.14
CASP4-208ENST00000530309 GOLGA2Q08379 1002 aa14.15□□□□□ -0.14
CASP4-208ENST00000530309 GALR2O43603 387 aaPredicted RBP14.13□□□□□ -0.15
CASP4-208ENST00000530309 TTLL13PA6NNM8 815 aa14.1□□□□□ -0.15
CASP4-208ENST00000530309 MKRN3Q13064 507 aaKnown RBP14.09□□□□□ -0.15
CASP4-208ENST00000530309 BMP2KQ9NSY1 1161 aaPredicted RBP14.09□□□□□ -0.15
CASP4-208ENST00000530309 PPP1R37O75864 691 aa14.08□□□□□ -0.16
CASP4-208ENST00000530309 CADPS2Q86UW7 1296 aa14.04□□□□□ -0.16
CASP4-208ENST00000530309 MS4A4AQ96JQ5 239 aa14.03□□□□□ -0.16
CASP4-208ENST00000530309 SP7Q8TDD2 431 aaPredicted RBP14.01□□□□□ -0.17
CASP4-208ENST00000530309 TRIM35Q9UPQ4 493 aa14.01□□□□□ -0.17
CASP4-208ENST00000530309 ILDR1Q86SU0 546 aaPredicted RBP13.96□□□□□ -0.17
CASP4-208ENST00000530309 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.96□□□□□ -0.17
CASP4-208ENST00000530309 GABBR2O75899 941 aa13.94□□□□□ -0.18
CASP4-208ENST00000530309 WDR70Q9NW82 654 aa13.94□□□□□ -0.18
CASP4-208ENST00000530309 ATMINO43313 823 aaPredicted RBP13.93□□□□□ -0.18
CASP4-208ENST00000530309 ATN1P54259 1190 aaPredicted RBP13.93□□□□□ -0.18
CASP4-208ENST00000530309 ASTLQ6HA08 431 aaPredicted RBP13.93□□□□□ -0.18
CASP4-208ENST00000530309 NBR1Q14596 966 aa13.9□□□□□ -0.18
CASP4-208ENST00000530309 P3H3Q8IVL6 736 aa13.87□□□□□ -0.19
CASP4-208ENST00000530309 IER5LQ5T953 404 aa13.86□□□□□ -0.19
CASP4-208ENST00000530309 PDE4AP27815 886 aa13.83□□□□□ -0.2
CASP4-208ENST00000530309 IRX5P78411 483 aaPredicted RBP13.83□□□□□ -0.2
CASP4-208ENST00000530309 NCKAP5LQ9HCH0 1330 aa13.83□□□□□ -0.2
CASP4-208ENST00000530309 DPY19L2Q6NUT2 758 aa13.82□□□□□ -0.2
CASP4-208ENST00000530309 PDCD7Q8N8D1 485 aaKnown RBP13.82□□□□□ -0.2
CASP4-208ENST00000530309 DCBLD2Q96PD2 775 aa13.82□□□□□ -0.2
CASP4-208ENST00000530309 OCEL1Q9H607 264 aa13.82□□□□□ -0.2
CASP4-208ENST00000530309 KCNV2Q8TDN2 545 aa13.8□□□□□ -0.2
CASP4-208ENST00000530309 LARP6Q9BRS8 491 aaKnown RBP13.79□□□□□ -0.2
CASP4-208ENST00000530309 CRISPLD2Q9H0B8 497 aa13.79□□□□□ -0.2
CASP4-208ENST00000530309 E2F4Q16254 413 aa13.76□□□□□ -0.21
CASP4-208ENST00000530309 PLCG2P16885 1265 aa13.75□□□□□ -0.21
CASP4-208ENST00000530309 MFSD10Q14728 455 aa13.75□□□□□ -0.21
CASP4-208ENST00000530309 PELP1Q8IZL8 1130 aaKnown RBP13.75□□□□□ -0.21
CASP4-208ENST00000530309 MICALL2Q8IY33 904 aa13.74□□□□□ -0.21
CASP4-208ENST00000530309 DDX27Q96GQ7 796 aaKnown RBP13.72□□□□□ -0.21
CASP4-208ENST00000530309 BOLA1Q9Y3E2 137 aa13.71□□□□□ -0.21
CASP4-208ENST00000530309 TMEM121BQ9BXQ6 578 aaPredicted RBP13.7□□□□□ -0.22
CASP4-208ENST00000530309 GPHNQ9NQX3 736 aaPredicted RBP13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms