RNA–Protein interactions for RNA: ENST00000530265.1

SCUBE2-210, Transcript of signal peptide, CUB domain and EGF like domain containing 2, humanhuman

TSL 4

Gene SCUBE2, Length 525 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE2-210ENST00000530265 CLCN6P51797 869 aa12.37□□□□□ -0.43
SCUBE2-210ENST00000530265 GALR2O43603 387 aaPredicted RBP12.35□□□□□ -0.43
SCUBE2-210ENST00000530265 POTEIP0CG38 1075 aa12.35□□□□□ -0.43
SCUBE2-210ENST00000530265 KIF12Q96FN5 646 aa12.3□□□□□ -0.44
SCUBE2-210ENST00000530265 KLHL34Q8N239 644 aa12.28□□□□□ -0.44
SCUBE2-210ENST00000530265 MS4A3Q96HJ5 214 aa12.27□□□□□ -0.45
SCUBE2-210ENST00000530265 MAP3K13O43283 966 aa12.23□□□□□ -0.45
SCUBE2-210ENST00000530265 FAM212AQ96EL1 285 aa12.23□□□□□ -0.45
SCUBE2-210ENST00000530265 DCAF8Q5TAQ9 597 aa12.19□□□□□ -0.46
SCUBE2-210ENST00000530265 SPOCK2Q92563 424 aa12.19□□□□□ -0.46
SCUBE2-210ENST00000530265 TRPC6Q9Y210 931 aa12.18□□□□□ -0.46
SCUBE2-210ENST00000530265 DCBLD2Q96PD2 775 aa12.16□□□□□ -0.46
SCUBE2-210ENST00000530265 PYGBP11216 843 aa12.13□□□□□ -0.47
SCUBE2-210ENST00000530265 PELP1Q8IZL8 1130 aaKnown RBP12.13□□□□□ -0.47
SCUBE2-210ENST00000530265 SGIP1Q9BQI5 828 aa12.13□□□□□ -0.47
SCUBE2-210ENST00000530265 ASTLQ6HA08 431 aaPredicted RBP12.12□□□□□ -0.47
SCUBE2-210ENST00000530265 GSE1Q14687 1217 aa12.11□□□□□ -0.47
SCUBE2-210ENST00000530265 IFNL1Q8IU54 200 aa12.11□□□□□ -0.47
SCUBE2-210ENST00000530265 PCDHB13Q9Y5F0 798 aa12.11□□□□□ -0.47
SCUBE2-210ENST00000530265 ATMINO43313 823 aaPredicted RBP12.1□□□□□ -0.47
SCUBE2-210ENST00000530265 BMP2KQ9NSY1 1161 aaPredicted RBP12.08□□□□□ -0.48
SCUBE2-210ENST00000530265 CHRM1P11229 460 aaPredicted RBP12.06□□□□□ -0.48
SCUBE2-210ENST00000530265 ATN1P54259 1190 aaPredicted RBP12.05□□□□□ -0.48
SCUBE2-210ENST00000530265 TIE1P35590 1138 aa12.04□□□□□ -0.48
SCUBE2-210ENST00000530265 CIZ1Q9ULV3 898 aaPredicted RBP12.02□□□□□ -0.49
SCUBE2-210ENST00000530265 PCDHB8Q9UN66 801 aa12.02□□□□□ -0.49
SCUBE2-210ENST00000530265 TTLL13PA6NNM8 815 aa12.01□□□□□ -0.49
SCUBE2-210ENST00000530265 LHX8Q68G74 356 aa11.97□□□□□ -0.49
SCUBE2-210ENST00000530265 POTEB2H3BUK9 544 aa11.96□□□□□ -0.49
SCUBE2-210ENST00000530265 POTEFA5A3E0 1075 aa11.93□□□□□ -0.5
SCUBE2-210ENST00000530265 SLC39A7Q92504 469 aa11.92□□□□□ -0.5
SCUBE2-210ENST00000530265 TMEM106CQ9BVX2 250 aa11.92□□□□□ -0.5
SCUBE2-210ENST00000530265 METRNQ9UJH8 293 aa11.92□□□□□ -0.5
SCUBE2-210ENST00000530265 C7P10643 843 aa11.91□□□□□ -0.5
SCUBE2-210ENST00000530265 ZNF467Q7Z7K2 595 aaPredicted RBP11.91□□□□□ -0.5
SCUBE2-210ENST00000530265 TRIM35Q9UPQ4 493 aa11.91□□□□□ -0.5
SCUBE2-210ENST00000530265 TRIM41Q8WV44 630 aa11.88□□□□□ -0.51
SCUBE2-210ENST00000530265 POTEJP0CG39 1038 aa11.87□□□□□ -0.51
SCUBE2-210ENST00000530265 RNF25Q96BH1 459 aaPredicted RBP11.87□□□□□ -0.51
SCUBE2-210ENST00000530265 PKD2Q13563 968 aa11.85□□□□□ -0.51
SCUBE2-210ENST00000530265 COLQQ9Y215 455 aaPredicted RBP11.85□□□□□ -0.51
SCUBE2-210ENST00000530265 PSEN1P49768 467 aa11.83□□□□□ -0.52
SCUBE2-210ENST00000530265 IER5LQ5T953 404 aa11.82□□□□□ -0.52
SCUBE2-210ENST00000530265 PDAP1Q13442 181 aaKnown RBP11.81□□□□□ -0.52
SCUBE2-210ENST00000530265 IRX5P78411 483 aaPredicted RBP11.78□□□□□ -0.52
SCUBE2-210ENST00000530265 OTUD5Q96G74 571 aa11.78□□□□□ -0.52
SCUBE2-210ENST00000530265 RIOK3O14730 519 aaKnown RBP11.75□□□□□ -0.53
SCUBE2-210ENST00000530265 ECM2O94769 699 aaPredicted RBP11.72□□□□□ -0.53
SCUBE2-210ENST00000530265 SEC24BO95487 1268 aa11.71□□□□□ -0.53
SCUBE2-210ENST00000530265 ILDR1Q86SU0 546 aaPredicted RBP11.7□□□□□ -0.54
SCUBE2-210ENST00000530265 RGL2O15211 777 aa11.69□□□□□ -0.54
SCUBE2-210ENST00000530265 PDCD7Q8N8D1 485 aaKnown RBP11.69□□□□□ -0.54
SCUBE2-210ENST00000530265 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.68□□□□□ -0.54
SCUBE2-210ENST00000530265 ZFP91Q96JP5 570 aaPredicted RBP11.68□□□□□ -0.54
SCUBE2-210ENST00000530265 OCEL1Q9H607 264 aa11.68□□□□□ -0.54
SCUBE2-210ENST00000530265 CABP2Q9NPB3 220 aa11.68□□□□□ -0.54
SCUBE2-210ENST00000530265 VGFO15240 615 aaPredicted RBP11.67□□□□□ -0.54
SCUBE2-210ENST00000530265 PLCG2P16885 1265 aa11.65□□□□□ -0.54
SCUBE2-210ENST00000530265 MKRN3Q13064 507 aaKnown RBP11.64□□□□□ -0.55
SCUBE2-210ENST00000530265 GOLGA2Q08379 1002 aa11.62□□□□□ -0.55
SCUBE2-210ENST00000530265 EFCAB3Q8N7B9 438 aa11.62□□□□□ -0.55
SCUBE2-210ENST00000530265 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.6□□□□□ -0.55
SCUBE2-210ENST00000530265 MAMSTRQ6ZN01 415 aa11.59□□□□□ -0.55
SCUBE2-210ENST00000530265 DPY19L2Q6NUT2 758 aa11.58□□□□□ -0.56
SCUBE2-210ENST00000530265 BCL11BQ9C0K0 894 aaPredicted RBP11.56□□□□□ -0.56
SCUBE2-210ENST00000530265 SCUBE2Q9NQ36 999 aa11.55□□□□□ -0.56
SCUBE2-210ENST00000530265 MS4A4AQ96JQ5 239 aa11.52□□□□□ -0.57
SCUBE2-210ENST00000530265 TAOK2Q9UL54 1235 aa11.51□□□□□ -0.57
SCUBE2-210ENST00000530265 STK24Q9Y6E0 443 aa11.51□□□□□ -0.57
SCUBE2-210ENST00000530265 STK25O00506 426 aa11.5□□□□□ -0.57
SCUBE2-210ENST00000530265 SOX12O15370 315 aa11.5□□□□□ -0.57
SCUBE2-210ENST00000530265 PHF8Q9UPP1 1060 aa11.49□□□□□ -0.57
SCUBE2-210ENST00000530265 FBXO22Q8NEZ5 403 aa11.47□□□□□ -0.57
SCUBE2-210ENST00000530265 L3MBTL3Q96JM7 780 aaPredicted RBP11.46□□□□□ -0.57
SCUBE2-210ENST00000530265 MFRPQ9BY79 579 aa11.46□□□□□ -0.57
SCUBE2-210ENST00000530265 TMEM121BQ9BXQ6 578 aaPredicted RBP11.45□□□□□ -0.58
SCUBE2-210ENST00000530265 LCE2DQ5TA82 110 aaPredicted RBP11.44□□□□□ -0.58
SCUBE2-210ENST00000530265 SLAIN1Q8ND83 568 aa11.43□□□□□ -0.58
SCUBE2-210ENST00000530265 BOLA1Q9Y3E2 137 aa11.43□□□□□ -0.58
SCUBE2-210ENST00000530265 HS6ST3Q8IZP7 471 aa11.42□□□□□ -0.58
SCUBE2-210ENST00000530265 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.4□□□□□ -0.58
SCUBE2-210ENST00000530265 NLRP6P59044 892 aa11.39□□□□□ -0.59
SCUBE2-210ENST00000530265 MICALL2Q8IY33 904 aa11.36□□□□□ -0.59
SCUBE2-210ENST00000530265 DNAJC5Q9H3Z4 198 aa11.36□□□□□ -0.59
SCUBE2-210ENST00000530265 CHGAP10645 457 aaKnown RBP11.35□□□□□ -0.59
SCUBE2-210ENST00000530265 C3orf67Q6ZVT6 689 aa11.35□□□□□ -0.59
SCUBE2-210ENST00000530265 NKX1-1Q15270 411 aaPredicted RBP11.34□□□□□ -0.59
SCUBE2-210ENST00000530265 TMEM92Q6UXU6 159 aa11.33□□□□□ -0.6
SCUBE2-210ENST00000530265 PPP1R37O75864 691 aa11.31□□□□□ -0.6
SCUBE2-210ENST00000530265 FAM163AQ96GL9 167 aaPredicted RBP11.31□□□□□ -0.6
SCUBE2-210ENST00000530265 RTN4Q9NQC3 1192 aaKnown RBP11.31□□□□□ -0.6
SCUBE2-210ENST00000530265 G3V3G9 751 aa11.27□□□□□ -0.61
SCUBE2-210ENST00000530265 ST18O60284 1047 aa11.26□□□□□ -0.61
SCUBE2-210ENST00000530265 AMER1Q5JTC6 1135 aaPredicted RBP11.26□□□□□ -0.61
SCUBE2-210ENST00000530265 POTEMA6NI47 508 aa11.23□□□□□ -0.61
SCUBE2-210ENST00000530265 HOXB3P14651 431 aaPredicted RBP11.22□□□□□ -0.61
SCUBE2-210ENST00000530265 POTEGQ6S5H5 508 aa11.22□□□□□ -0.61
SCUBE2-210ENST00000530265 KIF3CO14782 793 aa11.18□□□□□ -0.62
SCUBE2-210ENST00000530265 SNPHO15079 494 aa11.18□□□□□ -0.62
SCUBE2-210ENST00000530265 GTPBP6O43824 516 aaPredicted RBP11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms