RNA–Protein interactions for RNA: ENST00000529558.1

AMBRA1-208, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 5

Gene AMBRA1, Length 483 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-208ENST00000529558 TMEM132AQ24JP5 1023 aa7.02□□□□□ -1.29
AMBRA1-208ENST00000529558 NKX1-1Q15270 411 aaPredicted RBP7.01□□□□□ -1.29
AMBRA1-208ENST00000529558 OSCARQ8IYS5 282 aa7.01□□□□□ -1.29
AMBRA1-208ENST00000529558 RNF25Q96BH1 459 aaPredicted RBP7.01□□□□□ -1.29
AMBRA1-208ENST00000529558 GTPBP6O43824 516 aaPredicted RBP7□□□□□ -1.29
AMBRA1-208ENST00000529558 GSE1Q14687 1217 aa6.99□□□□□ -1.29
AMBRA1-208ENST00000529558 DAXXQ9UER7 740 aaPredicted RBP6.97□□□□□ -1.29
AMBRA1-208ENST00000529558 RIOK3O14730 519 aaKnown RBP6.95□□□□□ -1.3
AMBRA1-208ENST00000529558 DSG3P32926 999 aa6.94□□□□□ -1.3
AMBRA1-208ENST00000529558 NUBP1P53384 320 aa6.92□□□□□ -1.3
AMBRA1-208ENST00000529558 STK25O00506 426 aa6.91□□□□□ -1.3
AMBRA1-208ENST00000529558 VGFO15240 615 aaPredicted RBP6.89□□□□□ -1.31
AMBRA1-208ENST00000529558 DCAF8Q5TAQ9 597 aa6.89□□□□□ -1.31
AMBRA1-208ENST00000529558 C14orf37Q86TY3 774 aa6.88□□□□□ -1.31
AMBRA1-208ENST00000529558 SGIP1Q9BQI5 828 aa6.88□□□□□ -1.31
AMBRA1-208ENST00000529558 RYDENQ9NUL5 291 aaKnown RBP6.88□□□□□ -1.31
AMBRA1-208ENST00000529558 CHRM1P11229 460 aaPredicted RBP6.87□□□□□ -1.31
AMBRA1-208ENST00000529558 P3H3Q8IVL6 736 aa6.87□□□□□ -1.31
AMBRA1-208ENST00000529558 HOMEZQ8IX15 550 aa6.87□□□□□ -1.31
AMBRA1-208ENST00000529558 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.85□□□□□ -1.31
AMBRA1-208ENST00000529558 BCL11BQ9C0K0 894 aaPredicted RBP6.83□□□□□ -1.32
AMBRA1-208ENST00000529558 STK24Q9Y6E0 443 aa6.83□□□□□ -1.32
AMBRA1-208ENST00000529558 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP6.82□□□□□ -1.32
AMBRA1-208ENST00000529558 LMOD2Q6P5Q4 547 aa6.82□□□□□ -1.32
AMBRA1-208ENST00000529558 FAM212AQ96EL1 285 aa6.82□□□□□ -1.32
AMBRA1-208ENST00000529558 ZFP91Q96JP5 570 aaPredicted RBP6.82□□□□□ -1.32
AMBRA1-208ENST00000529558 BRPF1P55201 1214 aaPredicted RBP6.79□□□□□ -1.32
AMBRA1-208ENST00000529558 KCNV2Q8TDN2 545 aa6.79□□□□□ -1.32
AMBRA1-208ENST00000529558 WDR70Q9NW82 654 aa6.79□□□□□ -1.32
AMBRA1-208ENST00000529558 MNX1P50219 401 aaPredicted RBP6.77□□□□□ -1.33
AMBRA1-208ENST00000529558 CADPS2Q86UW7 1296 aa6.76□□□□□ -1.33
AMBRA1-208ENST00000529558 RASEFQ8IZ41 740 aa6.75□□□□□ -1.33
AMBRA1-208ENST00000529558 CREBZFQ9NS37 354 aa6.75□□□□□ -1.33
AMBRA1-208ENST00000529558 ZC3H15Q8WU90 426 aaKnown RBP6.73□□□□□ -1.33
AMBRA1-208ENST00000529558 PYGBP11216 843 aa6.72□□□□□ -1.33
AMBRA1-208ENST00000529558 SPDYE1Q8NFV5 336 aaPredicted RBP6.72□□□□□ -1.33
AMBRA1-208ENST00000529558 NEUROD2Q15784 382 aa6.7□□□□□ -1.34
AMBRA1-208ENST00000529558 ARHGEF1Q92888 912 aaKnown RBP6.7□□□□□ -1.34
AMBRA1-208ENST00000529558 SUPT5HO00267 1087 aaKnown RBP6.69□□□□□ -1.34
AMBRA1-208ENST00000529558 PRR29P0C7W0 189 aa6.69□□□□□ -1.34
AMBRA1-208ENST00000529558 SLC24A3Q9HC58 644 aa6.68□□□□□ -1.34
AMBRA1-208ENST00000529558 TESPA1A2RU30 521 aaPredicted RBP6.66□□□□□ -1.34
AMBRA1-208ENST00000529558 E2F4Q16254 413 aa6.65□□□□□ -1.34
AMBRA1-208ENST00000529558 CLEC11AQ9Y240 323 aa6.65□□□□□ -1.34
AMBRA1-208ENST00000529558 SEMA3EO15041 775 aa6.64□□□□□ -1.35
AMBRA1-208ENST00000529558 ZNF467Q7Z7K2 595 aaPredicted RBP6.64□□□□□ -1.35
AMBRA1-208ENST00000529558 ZMYND10O75800 440 aa6.63□□□□□ -1.35
AMBRA1-208ENST00000529558 AKT1S1Q96B36 256 aa6.63□□□□□ -1.35
AMBRA1-208ENST00000529558 MFRPQ9BY79 579 aa6.63□□□□□ -1.35
AMBRA1-208ENST00000529558 PDAP1Q13442 181 aaKnown RBP6.62□□□□□ -1.35
AMBRA1-208ENST00000529558 PPP1R37O75864 691 aa6.59□□□□□ -1.35
AMBRA1-208ENST00000529558 SMYD5Q6GMV2 418 aa6.59□□□□□ -1.35
AMBRA1-208ENST00000529558 BARGINQ6ZT62 677 aa6.57□□□□□ -1.36
AMBRA1-208ENST00000529558 REM2Q8IYK8 340 aaPredicted RBP6.57□□□□□ -1.36
AMBRA1-208ENST00000529558 PCDHB8Q9UN66 801 aa6.57□□□□□ -1.36
AMBRA1-208ENST00000529558 PCDHB13Q9Y5F0 798 aa6.57□□□□□ -1.36
AMBRA1-208ENST00000529558 PSEN1P49768 467 aa6.56□□□□□ -1.36
AMBRA1-208ENST00000529558 RBM42Q9BTD8 480 aaKnown RBP6.56□□□□□ -1.36
AMBRA1-208ENST00000529558 FBXO22Q8NEZ5 403 aa6.55□□□□□ -1.36
AMBRA1-208ENST00000529558 ZMYND15Q9H091 742 aa6.55□□□□□ -1.36
AMBRA1-208ENST00000529558 PODXL2Q9NZ53 605 aa6.55□□□□□ -1.36
AMBRA1-208ENST00000529558 UBTFP17480 764 aaKnown RBP6.54□□□□□ -1.36
AMBRA1-208ENST00000529558 ZNF579Q8NAF0 562 aaKnown RBP6.54□□□□□ -1.36
AMBRA1-208ENST00000529558 AK7Q96M32 723 aa6.54□□□□□ -1.36
AMBRA1-208ENST00000529558 TSPYL2Q9H2G4 693 aaPredicted RBP6.54□□□□□ -1.36
AMBRA1-208ENST00000529558 ARIH1Q9Y4X5 557 aaPredicted RBP6.54□□□□□ -1.36
AMBRA1-208ENST00000529558 SOX12O15370 315 aa6.53□□□□□ -1.36
AMBRA1-208ENST00000529558 NLRP6P59044 892 aa6.53□□□□□ -1.36
AMBRA1-208ENST00000529558 NCKAP5LQ9HCH0 1330 aa6.52□□□□□ -1.37
AMBRA1-208ENST00000529558 PDE4AP27815 886 aa6.51□□□□□ -1.37
AMBRA1-208ENST00000529558 EFCAB3Q8N7B9 438 aa6.51□□□□□ -1.37
AMBRA1-208ENST00000529558 IL27Q8NEV9 243 aa6.51□□□□□ -1.37
AMBRA1-208ENST00000529558 LARP6Q9BRS8 491 aaKnown RBP6.51□□□□□ -1.37
AMBRA1-208ENST00000529558 MFSD10Q14728 455 aa6.5□□□□□ -1.37
AMBRA1-208ENST00000529558 RSPH6AQ9H0K4 717 aa6.5□□□□□ -1.37
AMBRA1-208ENST00000529558 GPBP1L1Q9HC44 474 aaPredicted RBP6.5□□□□□ -1.37
AMBRA1-208ENST00000529558 PHF8Q9UPP1 1060 aa6.5□□□□□ -1.37
AMBRA1-208ENST00000529558 CCDC61Q9Y6R9 512 aa6.49□□□□□ -1.37
AMBRA1-208ENST00000529558 KRI1Q8N9T8 703 aaKnown RBP6.48□□□□□ -1.37
AMBRA1-208ENST00000529558 KDM4CQ9H3R0 1056 aa6.48□□□□□ -1.37
AMBRA1-208ENST00000529558 PITPNM1O00562 1244 aa6.47□□□□□ -1.37
AMBRA1-208ENST00000529558 CAMK2BQ13554 666 aa6.47□□□□□ -1.37
AMBRA1-208ENST00000529558 RBM26Q5T8P6 1007 aaKnown RBP6.47□□□□□ -1.37
AMBRA1-208ENST00000529558 CRISPLD2Q9H0B8 497 aa6.47□□□□□ -1.37
AMBRA1-208ENST00000529558 CABP2Q9NPB3 220 aa6.47□□□□□ -1.37
AMBRA1-208ENST00000529558 TRIM26Q12899 539 aaPredicted RBP6.46□□□□□ -1.38
AMBRA1-208ENST00000529558 GPIHBP1Q8IV16 184 aa6.46□□□□□ -1.38
AMBRA1-208ENST00000529558 DDX27Q96GQ7 796 aaKnown RBP6.46□□□□□ -1.38
AMBRA1-208ENST00000529558 TRIM66O15016 1216 aa6.45□□□□□ -1.38
AMBRA1-208ENST00000529558 IFNL1Q8IU54 200 aa6.45□□□□□ -1.38
AMBRA1-208ENST00000529558 FARP1Q9Y4F1 1045 aaPredicted RBP6.45□□□□□ -1.38
AMBRA1-208ENST00000529558 MLLT3P42568 568 aaPredicted RBP6.44□□□□□ -1.38
AMBRA1-208ENST00000529558 RANGAP1P46060 587 aaPredicted RBP6.44□□□□□ -1.38
AMBRA1-208ENST00000529558 CACNB1Q02641 598 aaPredicted RBP6.44□□□□□ -1.38
AMBRA1-208ENST00000529558 PDE4DQ08499 809 aa6.44□□□□□ -1.38
AMBRA1-208ENST00000529558 HRCP23327 699 aa6.43□□□□□ -1.38
AMBRA1-208ENST00000529558 CHADLQ6NUI6 762 aa6.43□□□□□ -1.38
AMBRA1-208ENST00000529558 POTEDQ86YR6 584 aa6.43□□□□□ -1.38
AMBRA1-208ENST00000529558 MS4A4AQ96JQ5 239 aa6.41□□□□□ -1.38
AMBRA1-208ENST00000529558 MKRN3Q13064 507 aaKnown RBP6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms