RNA–Protein interactions for RNA: ENST00000529421.5

TPT1-210, Transcript of tumor protein, translationally-controlled 1, humanhuman

TSL 3

Gene TPT1, Length 801 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPT1-210ENST00000529421 METRNQ9UJH8 293 aa13.23□□□□□ -0.29
TPT1-210ENST00000529421 SLC39A7Q92504 469 aa13.22□□□□□ -0.29
TPT1-210ENST00000529421 POTEMA6NI47 508 aa13.21□□□□□ -0.29
TPT1-210ENST00000529421 C7P10643 843 aa13.21□□□□□ -0.29
TPT1-210ENST00000529421 PROM2Q8N271 834 aa13.18□□□□□ -0.3
TPT1-210ENST00000529421 TSPYL2Q9H2G4 693 aaPredicted RBP13.17□□□□□ -0.3
TPT1-210ENST00000529421 POTEGQ6S5H5 508 aa13.16□□□□□ -0.3
TPT1-210ENST00000529421 POTEJP0CG39 1038 aa13.14□□□□□ -0.31
TPT1-210ENST00000529421 CCDC61Q9Y6R9 512 aa13.14□□□□□ -0.31
TPT1-210ENST00000529421 MAMSTRQ6ZN01 415 aa13.13□□□□□ -0.31
TPT1-210ENST00000529421 ATN1P54259 1190 aaPredicted RBP13.09□□□□□ -0.31
TPT1-210ENST00000529421 KIF12Q96FN5 646 aa13.09□□□□□ -0.31
TPT1-210ENST00000529421 PCDH10Q9P2E7 1040 aa13.05□□□□□ -0.32
TPT1-210ENST00000529421 SCUBE2Q9NQ36 999 aa13.02□□□□□ -0.33
TPT1-210ENST00000529421 BMP2KQ9NSY1 1161 aaPredicted RBP13.02□□□□□ -0.33
TPT1-210ENST00000529421 PLEKHG5O94827 1062 aa13.01□□□□□ -0.33
TPT1-210ENST00000529421 MAP3K13O43283 966 aa12.99□□□□□ -0.33
TPT1-210ENST00000529421 TRPC6Q9Y210 931 aa12.99□□□□□ -0.33
TPT1-210ENST00000529421 POTEFA5A3E0 1075 aa12.98□□□□□ -0.33
TPT1-210ENST00000529421 TIE1P35590 1138 aa12.98□□□□□ -0.33
TPT1-210ENST00000529421 MIER1Q8N108 512 aa12.98□□□□□ -0.33
TPT1-210ENST00000529421 LCE2DQ5TA82 110 aaPredicted RBP12.96□□□□□ -0.33
TPT1-210ENST00000529421 RASEFQ8IZ41 740 aa12.96□□□□□ -0.33
TPT1-210ENST00000529421 FAM163AQ96GL9 167 aaPredicted RBP12.95□□□□□ -0.34
TPT1-210ENST00000529421 TTLL13PA6NNM8 815 aa12.88□□□□□ -0.35
TPT1-210ENST00000529421 SEC24BO95487 1268 aa12.86□□□□□ -0.35
TPT1-210ENST00000529421 COLQQ9Y215 455 aaPredicted RBP12.86□□□□□ -0.35
TPT1-210ENST00000529421 SGIP1Q9BQI5 828 aa12.85□□□□□ -0.35
TPT1-210ENST00000529421 PLCD3Q8N3E9 789 aa12.83□□□□□ -0.36
TPT1-210ENST00000529421 IER5LQ5T953 404 aa12.82□□□□□ -0.36
TPT1-210ENST00000529421 PCDHB13Q9Y5F0 798 aa12.81□□□□□ -0.36
TPT1-210ENST00000529421 TRIM35Q9UPQ4 493 aa12.8□□□□□ -0.36
TPT1-210ENST00000529421 ZBTB47Q9UFB7 747 aaPredicted RBP12.78□□□□□ -0.36
TPT1-210ENST00000529421 NUBP1P53384 320 aa12.76□□□□□ -0.37
TPT1-210ENST00000529421 IFNL1Q8IU54 200 aa12.72□□□□□ -0.37
TPT1-210ENST00000529421 FAM212AQ96EL1 285 aa12.69□□□□□ -0.38
TPT1-210ENST00000529421 TMEM106CQ9BVX2 250 aa12.68□□□□□ -0.38
TPT1-210ENST00000529421 CDAN1Q8IWY9 1227 aa12.67□□□□□ -0.38
TPT1-210ENST00000529421 SLAIN1Q8ND83 568 aa12.67□□□□□ -0.38
TPT1-210ENST00000529421 PLCG2P16885 1265 aa12.64□□□□□ -0.39
TPT1-210ENST00000529421 ST18O60284 1047 aa12.61□□□□□ -0.39
TPT1-210ENST00000529421 IRX5P78411 483 aaPredicted RBP12.61□□□□□ -0.39
TPT1-210ENST00000529421 OCEL1Q9H607 264 aa12.55□□□□□ -0.4
TPT1-210ENST00000529421 DCAF8Q5TAQ9 597 aa12.52□□□□□ -0.41
TPT1-210ENST00000529421 FKBP8Q14318 412 aa12.51□□□□□ -0.41
TPT1-210ENST00000529421 PYGBP11216 843 aa12.5□□□□□ -0.41
TPT1-210ENST00000529421 TMEM121BQ9BXQ6 578 aaPredicted RBP12.48□□□□□ -0.41
TPT1-210ENST00000529421 PCDHB8Q9UN66 801 aa12.47□□□□□ -0.41
TPT1-210ENST00000529421 SNPHO15079 494 aa12.46□□□□□ -0.41
TPT1-210ENST00000529421 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.46□□□□□ -0.41
TPT1-210ENST00000529421 CCDC180Q9P1Z9 1646 aa12.39□□□□□ -0.43
TPT1-210ENST00000529421 FBXO3Q9UK99 471 aa12.38□□□□□ -0.43
TPT1-210ENST00000529421 MMRN1Q13201 1228 aa12.37□□□□□ -0.43
TPT1-210ENST00000529421 SPNS2Q8IVW8 549 aa12.37□□□□□ -0.43
TPT1-210ENST00000529421 PDCD7Q8N8D1 485 aaKnown RBP12.36□□□□□ -0.43
TPT1-210ENST00000529421 MARVELD3Q96A59 401 aa12.36□□□□□ -0.43
TPT1-210ENST00000529421 ZNF467Q7Z7K2 595 aaPredicted RBP12.35□□□□□ -0.43
TPT1-210ENST00000529421 GSE1Q14687 1217 aa12.33□□□□□ -0.44
TPT1-210ENST00000529421 GOLGA2Q08379 1002 aa12.32□□□□□ -0.44
TPT1-210ENST00000529421 MKRN3Q13064 507 aaKnown RBP12.32□□□□□ -0.44
TPT1-210ENST00000529421 C3orf67Q6ZVT6 689 aa12.32□□□□□ -0.44
TPT1-210ENST00000529421 L3MBTL3Q96JM7 780 aaPredicted RBP12.32□□□□□ -0.44
TPT1-210ENST00000529421 KLHL34Q8N239 644 aa12.29□□□□□ -0.44
TPT1-210ENST00000529421 CHRM1P11229 460 aaPredicted RBP12.28□□□□□ -0.44
TPT1-210ENST00000529421 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.26□□□□□ -0.454e-45■□□□□ 9.6
TPT1-210ENST00000529421 EMP3P54852 163 aa12.25□□□□□ -0.45
TPT1-210ENST00000529421 PSEN1P49768 467 aa12.24□□□□□ -0.45
TPT1-210ENST00000529421 ZCCHC6Q5VYS8 1495 aaKnown RBP12.23□□□□□ -0.45
TPT1-210ENST00000529421 VASPP50552 380 aaPredicted RBP12.23□□□□□ -0.45
TPT1-210ENST00000529421 ILDR1Q86SU0 546 aaPredicted RBP12.19□□□□□ -0.46
TPT1-210ENST00000529421 HS3ST6Q96QI5 342 aa12.17□□□□□ -0.46
TPT1-210ENST00000529421 POTEB3A0JP26 581 aa12.16□□□□□ -0.46
TPT1-210ENST00000529421 PDAP1Q13442 181 aaKnown RBP12.16□□□□□ -0.46
TPT1-210ENST00000529421 POTEBQ6S5H4 581 aa12.16□□□□□ -0.46
TPT1-210ENST00000529421 FAM205CA6NFA0 338 aa12.15□□□□□ -0.46
TPT1-210ENST00000529421 KRTAP3-3Q9BYR6 98 aa12.15□□□□□ -0.46
TPT1-210ENST00000529421 KRTAP3-2Q9BYR7 98 aa12.15□□□□□ -0.46
TPT1-210ENST00000529421 DPY19L2Q6NUT2 758 aa12.12□□□□□ -0.47
TPT1-210ENST00000529421 DCAF1Q9Y4B6 1507 aa12.1□□□□□ -0.47
TPT1-210ENST00000529421 G3V3G9 751 aa12.09□□□□□ -0.47
TPT1-210ENST00000529421 CABP2Q9NPB3 220 aa12.09□□□□□ -0.47
TPT1-210ENST00000529421 BOLA1Q9Y3E2 137 aa12.08□□□□□ -0.48
TPT1-210ENST00000529421 HOXB3P14651 431 aaPredicted RBP12.06□□□□□ -0.48
TPT1-210ENST00000529421 SPOCK2Q92563 424 aa12.03□□□□□ -0.48
TPT1-210ENST00000529421 CIZ1Q9ULV3 898 aaPredicted RBP12.03□□□□□ -0.48
TPT1-210ENST00000529421 HOXB1P14653 301 aaPredicted RBP12.01□□□□□ -0.49
TPT1-210ENST00000529421 ZNF710Q8N1W2 664 aa12□□□□□ -0.49
TPT1-210ENST00000529421 DOK7Q18PE1 504 aa11.98□□□□□ -0.49
TPT1-210ENST00000529421 IFNLR1Q8IU57 520 aaPredicted RBP11.98□□□□□ -0.49
TPT1-210ENST00000529421 ERBB3P21860 1342 aa11.95□□□□□ -0.5
TPT1-210ENST00000529421 RIMBP2O15034 1052 aa11.91□□□□□ -0.5
TPT1-210ENST00000529421 EFCAB3Q8N7B9 438 aa11.89□□□□□ -0.51
TPT1-210ENST00000529421 VARS2Q5ST30 1063 aaKnown RBP11.86□□□□□ -0.51
TPT1-210ENST00000529421 TRIM41Q8WV44 630 aa11.86□□□□□ -0.51
TPT1-210ENST00000529421 RNF166Q96A37 237 aaPredicted RBP11.85□□□□□ -0.51
TPT1-210ENST00000529421 MICALL2Q8IY33 904 aa11.84□□□□□ -0.51
TPT1-210ENST00000529421 ZSWIM6Q9HCJ5 1215 aa11.84□□□□□ -0.51
TPT1-210ENST00000529421 TMEM92Q6UXU6 159 aa11.82□□□□□ -0.52
TPT1-210ENST00000529421 ZNF687Q8N1G0 1237 aa11.8□□□□□ -0.52
TPT1-210ENST00000529421 MYT1LQ9UL68 1186 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms