RNA–Protein interactions for RNA: ENST00000528978.5

AP003557.1-202, humanhuman

TSL 4 BASIC

Gene AP003557.1, Length 562 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003557.1-202ENST00000528978 GSE1Q14687 1217 aa12.55□□□□□ -0.4
AP003557.1-202ENST00000528978 CCDC61Q9Y6R9 512 aa12.55□□□□□ -0.4
AP003557.1-202ENST00000528978 HAX1O00165 279 aa12.52□□□□□ -0.41
AP003557.1-202ENST00000528978 ZRANB1Q9UGI0 708 aa12.52□□□□□ -0.41
AP003557.1-202ENST00000528978 PYGBP11216 843 aa12.51□□□□□ -0.41
AP003557.1-202ENST00000528978 ECM2O94769 699 aaPredicted RBP12.5□□□□□ -0.41
AP003557.1-202ENST00000528978 PHF12Q96QT6 1004 aa12.48□□□□□ -0.41
AP003557.1-202ENST00000528978 RGL2O15211 777 aa12.47□□□□□ -0.41
AP003557.1-202ENST00000528978 RNF25Q96BH1 459 aaPredicted RBP12.46□□□□□ -0.41
AP003557.1-202ENST00000528978 PAK3O75914 559 aaPredicted RBP12.45□□□□□ -0.42
AP003557.1-202ENST00000528978 CHRM1P11229 460 aaPredicted RBP12.42□□□□□ -0.42
AP003557.1-202ENST00000528978 ZNF579Q8NAF0 562 aaKnown RBP12.42□□□□□ -0.42
AP003557.1-202ENST00000528978 KIF12Q96FN5 646 aa12.42□□□□□ -0.42
AP003557.1-202ENST00000528978 TRIM41Q8WV44 630 aa12.4□□□□□ -0.42
AP003557.1-202ENST00000528978 MAP3K13O43283 966 aa12.39□□□□□ -0.43
AP003557.1-202ENST00000528978 PCDHB8Q9UN66 801 aa12.34□□□□□ -0.43
AP003557.1-202ENST00000528978 PCDHB13Q9Y5F0 798 aa12.34□□□□□ -0.43
AP003557.1-202ENST00000528978 IFNL1Q8IU54 200 aa12.33□□□□□ -0.44
AP003557.1-202ENST00000528978 MS4A3Q96HJ5 214 aa12.32□□□□□ -0.44
AP003557.1-202ENST00000528978 TRPC6Q9Y210 931 aa12.3□□□□□ -0.44
AP003557.1-202ENST00000528978 RIOK3O14730 519 aaKnown RBP12.29□□□□□ -0.44
AP003557.1-202ENST00000528978 GALR2O43603 387 aaPredicted RBP12.29□□□□□ -0.44
AP003557.1-202ENST00000528978 SGIP1Q9BQI5 828 aa12.26□□□□□ -0.45
AP003557.1-202ENST00000528978 DCAF8L2P0C7V8 631 aa12.25□□□□□ -0.45
AP003557.1-202ENST00000528978 GABBR2O75899 941 aa12.24□□□□□ -0.45
AP003557.1-202ENST00000528978 ZNF467Q7Z7K2 595 aaPredicted RBP12.23□□□□□ -0.45
AP003557.1-202ENST00000528978 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.21□□□□□ -0.45
AP003557.1-202ENST00000528978 ZFP91Q96JP5 570 aaPredicted RBP12.21□□□□□ -0.45
AP003557.1-202ENST00000528978 VGFO15240 615 aaPredicted RBP12.2□□□□□ -0.46
AP003557.1-202ENST00000528978 SP7Q8TDD2 431 aaPredicted RBP12.2□□□□□ -0.46
AP003557.1-202ENST00000528978 PSEN1P49768 467 aa12.17□□□□□ -0.46
AP003557.1-202ENST00000528978 CHGAP10645 457 aaKnown RBP12.16□□□□□ -0.46
AP003557.1-202ENST00000528978 PDAP1Q13442 181 aaKnown RBP12.16□□□□□ -0.46
AP003557.1-202ENST00000528978 BMP2KQ9NSY1 1161 aaPredicted RBP12.13□□□□□ -0.47
AP003557.1-202ENST00000528978 STK25O00506 426 aa12.12□□□□□ -0.47
AP003557.1-202ENST00000528978 HS6ST3Q8IZP7 471 aa12.12□□□□□ -0.47
AP003557.1-202ENST00000528978 BCL11BQ9C0K0 894 aaPredicted RBP12.12□□□□□ -0.47
AP003557.1-202ENST00000528978 CLCN6P51797 869 aa12.1□□□□□ -0.47
AP003557.1-202ENST00000528978 TTLL13PA6NNM8 815 aa12.09□□□□□ -0.47
AP003557.1-202ENST00000528978 TMEM106CQ9BVX2 250 aa12.09□□□□□ -0.47
AP003557.1-202ENST00000528978 STK24Q9Y6E0 443 aa12.09□□□□□ -0.47
AP003557.1-202ENST00000528978 POTEIP0CG38 1075 aa12.08□□□□□ -0.48
AP003557.1-202ENST00000528978 TIE1P35590 1138 aa12.08□□□□□ -0.48
AP003557.1-202ENST00000528978 NKX1-1Q15270 411 aaPredicted RBP12.07□□□□□ -0.48
AP003557.1-202ENST00000528978 TAOK2Q9UL54 1235 aa12.06□□□□□ -0.48
AP003557.1-202ENST00000528978 ATMINO43313 823 aaPredicted RBP12.05□□□□□ -0.48
AP003557.1-202ENST00000528978 ATN1P54259 1190 aaPredicted RBP12.05□□□□□ -0.48
AP003557.1-202ENST00000528978 PELP1Q8IZL8 1130 aaKnown RBP12.03□□□□□ -0.48
AP003557.1-202ENST00000528978 CABP2Q9NPB3 220 aa12.03□□□□□ -0.48
AP003557.1-202ENST00000528978 ASTLQ6HA08 431 aaPredicted RBP12.02□□□□□ -0.49
AP003557.1-202ENST00000528978 DNAJC5Q9H3Z4 198 aa12.02□□□□□ -0.49
AP003557.1-202ENST00000528978 EFCAB3Q8N7B9 438 aa12□□□□□ -0.49
AP003557.1-202ENST00000528978 BBXQ8WY36 941 aaPredicted RBP12□□□□□ -0.49
AP003557.1-202ENST00000528978 TRIM35Q9UPQ4 493 aa12□□□□□ -0.49
AP003557.1-202ENST00000528978 DCBLD2Q96PD2 775 aa11.97□□□□□ -0.49
AP003557.1-202ENST00000528978 SLC24A1O60721 1099 aa11.94□□□□□ -0.5
AP003557.1-202ENST00000528978 MFRPQ9BY79 579 aa11.94□□□□□ -0.5
AP003557.1-202ENST00000528978 PHF8Q9UPP1 1060 aa11.92□□□□□ -0.5
AP003557.1-202ENST00000528978 GTPBP6O43824 516 aaPredicted RBP11.91□□□□□ -0.5
AP003557.1-202ENST00000528978 FBXO22Q8NEZ5 403 aa11.89□□□□□ -0.51
AP003557.1-202ENST00000528978 MS4A4AQ96JQ5 239 aa11.89□□□□□ -0.51
AP003557.1-202ENST00000528978 PAXIP1Q6ZW49 1069 aaPredicted RBP11.88□□□□□ -0.51
AP003557.1-202ENST00000528978 POTEFA5A3E0 1075 aa11.87□□□□□ -0.51
AP003557.1-202ENST00000528978 GOLGA2Q08379 1002 aa11.86□□□□□ -0.51
AP003557.1-202ENST00000528978 MKRN3Q13064 507 aaKnown RBP11.86□□□□□ -0.51
AP003557.1-202ENST00000528978 ILDR1Q86SU0 546 aaPredicted RBP11.86□□□□□ -0.51
AP003557.1-202ENST00000528978 SOX12O15370 315 aa11.85□□□□□ -0.51
AP003557.1-202ENST00000528978 IRX5P78411 483 aaPredicted RBP11.85□□□□□ -0.51
AP003557.1-202ENST00000528978 PLCB2Q00722 1185 aa11.85□□□□□ -0.51
AP003557.1-202ENST00000528978 CFAP44Q96MT7 982 aa11.85□□□□□ -0.51
AP003557.1-202ENST00000528978 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.85□□□□□ -0.51
AP003557.1-202ENST00000528978 COLQQ9Y215 455 aaPredicted RBP11.85□□□□□ -0.51
AP003557.1-202ENST00000528978 PPP1R37O75864 691 aa11.83□□□□□ -0.52
AP003557.1-202ENST00000528978 DPY19L2Q6NUT2 758 aa11.82□□□□□ -0.52
AP003557.1-202ENST00000528978 PDCD7Q8N8D1 485 aaKnown RBP11.82□□□□□ -0.52
AP003557.1-202ENST00000528978 SPRYD3Q8NCJ5 442 aa11.82□□□□□ -0.52
AP003557.1-202ENST00000528978 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.82□□□□□ -0.52
AP003557.1-202ENST00000528978 IER5LQ5T953 404 aa11.81□□□□□ -0.52
AP003557.1-202ENST00000528978 NLRP6P59044 892 aa11.8□□□□□ -0.52
AP003557.1-202ENST00000528978 SLC39A7Q92504 469 aa11.8□□□□□ -0.52
AP003557.1-202ENST00000528978 METRNQ9UJH8 293 aa11.8□□□□□ -0.52
AP003557.1-202ENST00000528978 C7P10643 843 aa11.76□□□□□ -0.53
AP003557.1-202ENST00000528978 OCEL1Q9H607 264 aa11.76□□□□□ -0.53
AP003557.1-202ENST00000528978 PLCG2P16885 1265 aa11.72□□□□□ -0.53
AP003557.1-202ENST00000528978 TSHZ2Q9NRE2 1034 aa11.72□□□□□ -0.53
AP003557.1-202ENST00000528978 POTEB2H3BUK9 544 aa11.71□□□□□ -0.53
AP003557.1-202ENST00000528978 SEC24BO95487 1268 aa11.71□□□□□ -0.53
AP003557.1-202ENST00000528978 POTEJP0CG39 1038 aa11.68□□□□□ -0.54
AP003557.1-202ENST00000528978 CADPS2Q86UW7 1296 aa11.67□□□□□ -0.54
AP003557.1-202ENST00000528978 RYDENQ9NUL5 291 aaKnown RBP11.67□□□□□ -0.54
AP003557.1-202ENST00000528978 HAP1P54257 671 aaPredicted RBP11.66□□□□□ -0.54
AP003557.1-202ENST00000528978 MICALL2Q8IY33 904 aa11.63□□□□□ -0.55
AP003557.1-202ENST00000528978 TMEM121BQ9BXQ6 578 aaPredicted RBP11.62□□□□□ -0.55
AP003557.1-202ENST00000528978 BOLA1Q9Y3E2 137 aa11.61□□□□□ -0.55
AP003557.1-202ENST00000528978 TMEM92Q6UXU6 159 aa11.56□□□□□ -0.56
AP003557.1-202ENST00000528978 KDM2AQ9Y2K7 1162 aa11.56□□□□□ -0.56
AP003557.1-202ENST00000528978 L3MBTL3Q96JM7 780 aaPredicted RBP11.55□□□□□ -0.56
AP003557.1-202ENST00000528978 NCKAP5LQ9HCH0 1330 aa11.54□□□□□ -0.56
AP003557.1-202ENST00000528978 CRISPLD2Q9H0B8 497 aa11.49□□□□□ -0.57
AP003557.1-202ENST00000528978 G3V3G9 751 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms